Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe03g1526 | ATGGCAAACCCAAAGAATTCAGCTCCACTTTCTTCTTCTTCTTCTCCGATCACCCGGCCGGTTTCCGGCACCGAAGCGGCCCAACCAGACCGTCCGCCCGGCAAGAGACCCAGAGACTGCAGCAAACATCCAGTTTTCAGAGGCGTACGGAAAAGAAGCTGGGGAAAATGGGTGTCGGAAATCCGGCAGCCACGTAAGAAATCCCGAATTTGGCTCGGAACTTTTCCGACGCCGGAAATGGCGGCGCGTGCACACGACGCGGCGGCGCTTAGCATCAAAGGCGACTCGGCCATCCTCAATTACCCTGAACTCGCCGAGTTTTTGCCCCGGCCGGCGTCGCTCATGCCGCACGACGTTCAGGCCGCCGCCGCCAAAGCCGCAGCGATGGTCAATTTGAATTCCTCTGCATTGCCGTCGCCGTCACCGTCATCGGAGGAGGAGGAGTTAAGTGAGATCGTCGAGTTACCGAATATAGAAGACGATTTTGGTACTGAGTCGCTTAACGAGTTCAAATTAGTTACTGAGTCGTGGGAATGGTGGGAGTACGTGGCAATGCCGTTGGCGGCGGATTTCGGCGGCAGTTATTTTCCCGACAAGACGACGGCGGAAGACAGTTTATTCGCGAGCAGCTTTTACGGTGCTCTTTGGGATTAA | 654 | 55.81 | MANPKNSAPLSSSSSPITRPVSGTEAAQPDRPPGKRPRDCSKHPVFRGVRKRSWGKWVSEIRQPRKKSRIWLGTFPTPEMAARAHDAAALSIKGDSAILNYPELAEFLPRPASLMPHDVQAAAAKAAAMVNLNSSALPSPSPSSEEEELSEIVELPNIEDDFGTESLNEFKLVTESWEWWEYVAMPLAADFGGSYFPDKTTAEDSLFASSFYGALWD | 217 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 72132703 | 72133356 | - | Hsped.03g15260.1 | Hepe03g1526 | 566524 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe03g1526 | 217 | MobiDBLite | consensus disorder prediction | 31 | 46 | - | - | |
Hepe03g1526 | 217 | FunFam | Ethylene-responsive transcription factor 2 | 44 | 103 | - | - | |
Hepe03g1526 | 217 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Hepe03g1526 | 217 | Pfam | AP2 domain | 44 | 94 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe03g1526 | 217 | CDD | AP2 | 46 | 104 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe03g1526 | 217 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED | 22 | 159 | IPR051032 | - | |
Hepe03g1526 | 217 | PRINTS | Ethylene responsive element binding protein signature | 46 | 57 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe03g1526 | 217 | PRINTS | Ethylene responsive element binding protein signature | 68 | 84 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe03g1526 | 217 | SMART | rav1_2 | 45 | 108 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe03g1526 | 217 | MobiDBLite | consensus disorder prediction | 1 | 46 | - | - | |
Hepe03g1526 | 217 | Gene3D | AP2/ERF domain | 45 | 103 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe03g1526 | 217 | ProSiteProfiles | AP2/ERF domain profile. | 45 | 102 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Hepe03g1526 | 217 | SUPERFAMILY | DNA-binding domain | 45 | 102 | IPR016177 | GO:0003677(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe03g1526 | Hepe-Chr3:72132703 | Hepe08g2612 | Hepe-Chr8:68003145 | 1.09e-41 | dispersed | |
Hepe05g2073 | Hepe-Chr5:71232350 | Hepe03g1526 | Hepe-Chr3:72132703 | 4.88e-39 | transposed | |
Hepe10g0364 | Hepe-Chr10:3964166 | Hepe03g1526 | Hepe-Chr3:72132703 | 4.54e-45 | wgd | |
Hepe02g1438 | Hepe-Chr2:18336072 | Hepe03g1526 | Hepe-Chr3:72132703 | 1.10e-50 | wgd | |
Hepe03g1526 | Hepe-Chr3:72132703 | Hepe09g0797 | Hepe-Chr9:7758930 | 2.08e-46 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
55296 | PF00847 | AP2 | 1.30E-14 | CL0081 | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe03g1526 | K09286 | - | csv:101217361 | 304.293 |