Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe03g1569 ATGGGAATCAATTCCAATCGAGTTGAGAATCTGGAATGTCAGGAAACGGTGTTGAGAATTCCGCCGGAGGCAATGCCGGCACCGCCTCAGACGACGGAGGAGATTCACAAAGTCTGCTTGCCTCCGAAACAAACTACACTCGAGAAACTTAAGCACAAGCTAGCGGAGGTGTTCTTCCCTGATGACCCTCTTCACAGATTCAAGAACCAAACAGGGTTGAGAAAAGTGCTTTTGGGTTTTCAATTTCTCTTCCCTGTTTTCCAATGGGGACCCGATTATACCCTCGCTCTTTTCAAGTCTGATATCGTTTCTGGTCTCACCATTGCTAGCCTTGCTATTCCCCAGGGAATAAGTTATGCCAAACTAGCAAATTTGCCTCCTATCATCGGATTATATTCAAGTTTTGTGCCTCCACTGATATATTCCATCCTTGGAAGCTCTAGACATCTTGCTGTTGGCCCTGTTTCAATTGCATCTCTGGTCATGGGATCGATGATCACTGCGGCAGTCCCTTATAACGAACACCCAACTTTGTATCTTAAGATAGCTTTTACTGCTACCTTCTTTGCTGGTGTATTCCAAGCATCTCTAGGATTGTTAAGGTTAGGCTTTGTGATTGATTTTCTTTCAAAGGCTACTTTAGTTGGGTTTATGGCTGGTGCAGCAGTCATTGTGTCATTGCAACAACTCAAAGGGTTGCTTGGAATTGTCCATTTCACCACCAAAATGCAATTTATTCCTGTCATGTCTTCTGTTTTTCACCAAAAAGATGAGTGGTCCTGGCAAACTATTGTTTTAGGCTTCATTTTCCTATTCTTTCTTCTGGGAACAAGGCATATAAGCATCAAGAAACCAAAGCTTTTCTGGATTTCAGCAGCTGCTCCATTGACATCAGTTATTTTGTCCACTATTTTAGTCTTCCTTCTCAAAGCAAAAGCTCCTGGAATCTCAGTGATTGGTCATTTGCCAAAGGGTGTTAATCCTCCATCTGTTAACATGCTGTACTTTACTGGTTCTCATTTGGCACTTGCCATTAAAATTGGCCTTATAACTGGAATTCTCTCGCTCACTGAAGGAATTGCCGTAGGAAGGACATTCGCGGCTTTGAAAAACTATCAAGTGGATGGGAATAAAGAAATGATGGCTATTGGTTTTATGAACATTGCTGGATCTTGTTCTTCATGCTATGTCACTACAGGATCGTTTTCGCGGTCTGCTGTGAATTATAATGCTGGGGCACGAACAGCAGTTTCAAATGTAGTGATGTCTGCAGCTGTGCTCATAACGTTGTTGTTTCTGATGCCACTGTTCCATTATACTCCAAATTTCATCCTAGCAGCCATCATTATAACAGCAGTGATTGGGCTAATTGATTACCAATCAGCTTGTAGGTTGTGGAAAGTTGACAAGCTCGATTTCGTAGCTTGTGTTTGTTCTTTCTTCGGCGTTCTTTTCATCTCGGTTCCATTGGGTCTTGCCATTGCAGTTGGAGTTTCTGTTTTCAAAATTATTCTGCATGTCACCAGGCCAAACACCATGGTTTTGGGGAATATTTCTGGGACTCAAATATTCCAAAACCTTGACCGATACCTTGAAGCTACAAGGGTGCCTTCATTCCTCATTCTTGCCATTGAATCTCCAATCTACTTTGCAAATTCAACATACCTACAAGAAAGAATTCTAAGGTGGATTAGAGAAGAAGAAGAGCGGGTAAAAGCGACCAATGCCAGCCCGTTGAAATGTGTAATCCTAGACATGACAGCTGTGACATCCATAGACACAAGTGGTATCGAAACAGTATGTGAACTTAGGAAGTTGTTGTTGCAAAAATCATTGCAGTTTGTGCTTGCAAATCCTGGTGGAAACGTGATGGAAAAACTGTATAAATCAAAGGCCTTGGAGCCGTTCGAGTTCAACGGTCTGTACCTCTCAGTTGGAGAAGCTGTGAAGGACATTTCTTCTTTATGGAAGAGGCTGCCATAA 1983 42.36 MGINSNRVENLECQETVLRIPPEAMPAPPQTTEEIHKVCLPPKQTTLEKLKHKLAEVFFPDDPLHRFKNQTGLRKVLLGFQFLFPVFQWGPDYTLALFKSDIVSGLTIASLAIPQGISYAKLANLPPIIGLYSSFVPPLIYSILGSSRHLAVGPVSIASLVMGSMITAAVPYNEHPTLYLKIAFTATFFAGVFQASLGLLRLGFVIDFLSKATLVGFMAGAAVIVSLQQLKGLLGIVHFTTKMQFIPVMSSVFHQKDEWSWQTIVLGFIFLFFLLGTRHISIKKPKLFWISAAAPLTSVILSTILVFLLKAKAPGISVIGHLPKGVNPPSVNMLYFTGSHLALAIKIGLITGILSLTEGIAVGRTFAALKNYQVDGNKEMMAIGFMNIAGSCSSCYVTTGSFSRSAVNYNAGARTAVSNVVMSAAVLITLLFLMPLFHYTPNFILAAIIITAVIGLIDYQSACRLWKVDKLDFVACVCSFFGVLFISVPLGLAIAVGVSVFKIILHVTRPNTMVLGNISGTQIFQNLDRYLEATRVPSFLILAIESPIYFANSTYLQERILRWIREEEERVKATNASPLKCVILDMTAVTSIDTSGIETVCELRKLLLQKSLQFVLANPGGNVMEKLYKSKALEPFEFNGLYLSVGEAVKDISSLWKRLP 660
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 72488887 72493064 - Hsped.03g15690.1 Hepe03g1569 566567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe03g1569 660 CDD STAS_SulP_like_sulfate_transporter 530 645 - -
Hepe03g1569 660 ProSitePatterns SLC26A transporters signature. 127 148 IPR018045 GO:0008271(InterPro)|GO:0008272(InterPro)
Hepe03g1569 660 Gene3D STAS domain 509 653 IPR036513 -
Hepe03g1569 660 FunFam Sulfate transporter 31 509 654 - -
Hepe03g1569 660 NCBIfam sulfate permease 85 648 IPR001902 GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe03g1569 660 Pfam STAS domain 530 648 IPR002645 -
Hepe03g1569 660 SUPERFAMILY SpoIIaa-like 533 651 IPR036513 -
Hepe03g1569 660 PANTHER SULFATE TRANSPORTER 73 651 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe03g1569 660 ProSiteProfiles STAS domain profile. 529 652 IPR002645 -
Hepe03g1569 660 Pfam Sulfate permease family 98 477 IPR011547 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g3006 Hepe-Chr2:79216345 Hepe03g1569 Hepe-Chr3:72488887 2.39e-96 dispersed
Hepe03g1569 Hepe-Chr3:72488887 Hepe03g2029 Hepe-Chr3:77628122 2.39e-261 dispersed
Hepe01g0398 Hepe-Chr1:55983863 Hepe03g1569 Hepe-Chr3:72488887 1.72e-285 transposed
Hepe03g1569 Hepe-Chr3:72488887 Hepe09g0746 Hepe-Chr9:7147260 1.10e-177 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe03g1569 K17471 - csv:101203079 1165.6