Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe03g1575 ATGGAGATCAAAGAAAAGAAGATAATTTCAAGTATCTCCTCTCCATTTTTGTCATCTTCTTTGATGGCTTTCCTCCTGGTTTCCCTCTGTTTCATCTTTTACGGCCCGAGCGCCGCGTTCGCGGTCGGGCCGGGCGCTTCCTTCATTCCTAAAGATAATTTTCTCATTGATTGTGGTTCAAGCAAGGAGATTGGTGCACTCCCTGATGGAAGAGTGTTCAAAAGTGATGAGCAATCCAAGCAGTACCTAGATGCCAAAGATGATATCATAGGGGCCGCCCCACCGGAGGTGAAGGCGCCTTCGCCCGTTGATTTGACGGCGAGAGTCTTCCACCAAGAAGCTACTTACAATTTTCAGATGGCTGAGCCAGGATGGCATTGGCTCCGCCTCCATTTCCTGCCAGTTAAAACCGATGCCTTTGATCTCCTGCAGGCCAAATTTTCAGTAGCCACTGAAAAGTATGTGTTGCTTCACAGCTTCAACATCAACAATGAATCCACATTTGTTCTCAAGGAGTTTCTCCTCAACATCACTGATCCAAAACTATCAATCAGGTTCATCCCAATGAAGAATTCAGCTGCTTACATCAACGCCATCGAGCTCGTCTCGGCTCCCGTCGAATTGATCGCCGACTCGAACATCGAGATTTCTCCGGTTGGGACAATTGAGGGCCTGAGCAGACATGCATTTCAAACATCCTATAGGTTAAACATGGGAGGACCTATAATCACTCCAAGAAATGACACTCTTGGGAGGACATGGGAGACAGATGAAGTTTTTAGGATTCCCAAAGCAGCTGGTAAGGATGTGATTGTTGAGACAAACAGCATCAAATATCAAGGGGGATTGAAAGAAACAGGAATGCTAATTGCTCCTCCAAGTGTTTATGCAAGTGCAGTTCAAATGGGAGATGCTCAAGTCAGTATACCAAATTTCAATATCACATGGAAATTTGAGGCAGATCCTTCATTTGGTTACCTAATTCGCTTCCATTTCTGTGACATTGTTAGCAAAGTACTAAATGATCTGTATTTCAATGTGTATGTAAATGGGAAGCCTGCCATAACAAATTTGGATTTGTCACACAAGTTAGGAAGTTTGGCAACTGCATACTACAAGGATGTTGTGGTGAATGCTTCCTTGATTGAAGATGGAAAACTGACAGTTCAAATTAGTCCGGCGAACGTTGAAACGGGCAGTGGCAATGCAATTCTAAATGGATTGGAGGTGTTGAAAATAAGCAATTCTGTGAATAGTCTGGATGGAGAGTTTGGAGTGGATGGTAGGTCTGCAAATGGGTCGAATCGTGGCACGGTGGCTGCGGTTGGGTTTGCGATGATGTTCGGGGCATTTGTCGGGCTCGGTGCGATGGTGATGAAATGGCACAAAAGGCCTCAAGATTGGCAGAAGAGGAACAGTTTCTCTTCATGGTTGCTTCCTGTACATGCTGGTGACTCAAGCTTTATGACAAGCAAGACATCATATGGATCACACAAGACCAACATGTCATTAGGCCTTGGGAGATTCTTCACACTGGCAGAGCTGCAAGAAGCCACCAAGAACTTTGATCCAAATGCAATAATTGGTGTAGGAGGGTTTGGAAATGTGTACCTTGGAGTGATTGATGAAGGGACAAAAGTGGCAGTGAAGAGAGGAAATCCACAATCAGAACAAGGGATAACAGAATTCGAAACAGAAATTCAGATGCTTTCAAAACTGAGACACAGGCATTTGGTTTCTTTGATTGGGTACTGTGATGAAAACTCAGAAATGATATTGGTATATGAGTTCATGTCAAATGGGCCATTCAGAGATCACTTGTATGGAAAGGACATGCCTCCATTGTCATGGAAGCAAAGGCTAGAGATCTGTATCGGATCAGCTCGAGGACTTCATTACCTTCACACAGGAACAGCACAGGGAATCATTCACCGTGATGTCAAAACAACCAACATTTTGCTCGACGAAAACTTCACTGCAAAAGTTGCCGATTTCGGGTTGTCAAAGGATGCTCCAATGGGGCAGGGACATGTTAGTACTGCAGTGAAGGGAAGTTTTGGATATTTGGATCCAGAGTACTTTAGGAGGCAACAGTTGACAGAAAAATCAGATGTTTATTCCTTTGGAGTTGTTCTGCTTGAAGCTTTGTGTGTAAGGCCAGCAATCAACCCATCTTTGACAAGGGAACAAGTCAATTTGGCTGATTGGGCAATGCAATGTAAGAGAAAAGGCTGTTTGGAAAAGATTATGGATCCTCTTCTAGTTGGAAACATAAATCCTGAGTCCATGAAGAAGTTTGCTGAAGCAGCAGAGAAATGTCTTGCTGAACATGGTGTTGATAGGCCAAGCATGGGAGATGTGCTTTGGAATTTGGAGTATGCATTGCAACTTCAAGAAGCATTCACACAAGGCAAGAATGAAGATGAAACCAAAGGCACAGCCACGCCACCTGTCGCCCCCGCTACCCCCACCGCTCCCGCTCCCGCTCTCGACGCTTCGACAAATGAACCGAGCACCAACTCCGACAACCGCCCTGTCGTGCAGCCGGAACAGACTAGGCAGCCACCAGAGGTCCAAGCCATTGATGATCACTCAGGAAGTGCAATGTTTGCTCATTTTTCTAATCTCAATGGTAGATAA 2640 44.96 MEIKEKKIISSISSPFLSSSLMAFLLVSLCFIFYGPSAAFAVGPGASFIPKDNFLIDCGSSKEIGALPDGRVFKSDEQSKQYLDAKDDIIGAAPPEVKAPSPVDLTARVFHQEATYNFQMAEPGWHWLRLHFLPVKTDAFDLLQAKFSVATEKYVLLHSFNINNESTFVLKEFLLNITDPKLSIRFIPMKNSAAYINAIELVSAPVELIADSNIEISPVGTIEGLSRHAFQTSYRLNMGGPIITPRNDTLGRTWETDEVFRIPKAAGKDVIVETNSIKYQGGLKETGMLIAPPSVYASAVQMGDAQVSIPNFNITWKFEADPSFGYLIRFHFCDIVSKVLNDLYFNVYVNGKPAITNLDLSHKLGSLATAYYKDVVVNASLIEDGKLTVQISPANVETGSGNAILNGLEVLKISNSVNSLDGEFGVDGRSANGSNRGTVAAVGFAMMFGAFVGLGAMVMKWHKRPQDWQKRNSFSSWLLPVHAGDSSFMTSKTSYGSHKTNMSLGLGRFFTLAELQEATKNFDPNAIIGVGGFGNVYLGVIDEGTKVAVKRGNPQSEQGITEFETEIQMLSKLRHRHLVSLIGYCDENSEMILVYEFMSNGPFRDHLYGKDMPPLSWKQRLEICIGSARGLHYLHTGTAQGIIHRDVKTTNILLDENFTAKVADFGLSKDAPMGQGHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLLEALCVRPAINPSLTREQVNLADWAMQCKRKGCLEKIMDPLLVGNINPESMKKFAEAAEKCLAEHGVDRPSMGDVLWNLEYALQLQEAFTQGKNEDETKGTATPPVAPATPTAPAPALDASTNEPSTNSDNRPVVQPEQTRQPPEVQAIDDHSGSAMFAHFSNLNGR 879
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 72626890 72629529 + Hsped.03g15750.1 Hepe03g1575 566573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe03g1575 879 PANTHER OS07G0166700 PROTEIN 510 799 IPR045272 GO:0004672(PANTHER)|GO:0004714(InterPro)|GO:0005886(PANTHER)|GO:0006468(InterPro)|GO:0009506(PANTHER)|GO:0046777(PANTHER)
Hepe03g1575 879 FunFam Receptor-like protein kinase FERONIA 598 811 - -
Hepe03g1575 879 ProSiteProfiles Protein kinase domain profile. 522 794 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe03g1575 879 FunFam receptor-like protein kinase FERONIA 485 597 - -
Hepe03g1575 879 SMART serkin_6 522 794 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe03g1575 879 FunFam Putative receptor-like protein kinase 53 205 - -
Hepe03g1575 879 CDD STKc_IRAK 528 792 - -
Hepe03g1575 879 SUPERFAMILY Protein kinase-like (PK-like) 497 792 IPR011009 -
Hepe03g1575 879 Gene3D - 53 206 - -
Hepe03g1575 879 Gene3D - 229 415 - -
Hepe03g1575 879 Gene3D Transferase(Phosphotransferase) domain 1 598 815 - -
Hepe03g1575 879 MobiDBLite consensus disorder prediction 803 879 - -
Hepe03g1575 879 Pfam Protein tyrosine and serine/threonine kinase 527 737 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe03g1575 879 ProSitePatterns Serine/Threonine protein kinases active-site signature. 642 654 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe03g1575 879 Gene3D Phosphorylase Kinase; domain 1 486 597 - -
Hepe03g1575 879 FunFam Receptor-like protein kinase FERONIA 229 415 - -
Hepe03g1575 879 MobiDBLite consensus disorder prediction 828 855 - -
Hepe03g1575 879 Pfam Malectin-like domain 56 412 IPR024788 -
Hepe03g1575 879 ProSitePatterns Protein kinases ATP-binding region signature. 528 550 IPR017441 GO:0005524(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g1575 Hepe-Chr3:72626890 Hepe09g0097 Hepe-Chr9:790976 1.75e-310 dispersed
Hepe03g1575 Hepe-Chr3:72626890 Hepe08g2594 Hepe-Chr8:67789271 9.58e-68 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72678 PF12819 Malectin_like 7.60E-37 CL0202 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe03g1575 - - - 0.0