Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe03g1618 ATGGAAAGTATTTCGCTTCACGGAACGCTTCACGCTACAATCTATGAAGTCGACCAGTTGCATCATGGTGGTGGAGCCAACGTCTTCAGCAAGTTGATGCAAAACTTTGAGGAGGCTGTTGGAATTGGCAAAGGAGTTACCAAACTATATGCGACTATAGATTTAGAAAAGGCTAGAGCTGGGAGGACACGAATTTTGGAAAATGAACCCTCTAACCCAAGATGGTATGAATCTTTTCACATTTACTGTGCCCATAAGGCATCAAATGTTGTCTTCACCGTGAAGGATGATAATCCCATTGGTGCAAGTTTGATTGGACGTGCATATGTACCTGTGGAAGATCTCTTAGTTGGGGAGGAAGTTGACAGATGGATTCCAATCTTAGATGAAGAGAAAAATCCAATTGAAGGAGAATCTAAGATTCATGTCAAGCTTCAATTCTTCAGTGTTACTAAAGATCAAAATTGGGGTCGTGGTATAAGAAGTCGTAAATTTCCCGGAGTCCCCTATACATATTACTCACAGAGACAAGGCTGTAAGGTCTCTTTGTATCAAGATGCTCACGTCCCTGATAATTTTATTCCTAAAATACCTCTTGCTGGAGGAAAGAATTATGCTCCCTCCAGATGTTGGGAAGATATTTTTGATGCCATACAAAATGCAAAACACATGATCTACATCACAGGATGGTCTGTTTATACAGAAATTGCCTTGGTAAGGGACTCAAGGAGGCCAAAGCCCGGAGGAGACACCATGCTTGGTGAGCTGCTTAAGAAGAAAGCAAGTGAAGGTGTCAGAGTTCTTATGCTTGTCTGGGATGACAGAACATCAGTTGGTTTACTAAAAAAGGATGGTCTGATGGCTACTCATGATGAAGAAACTGAACGATTTTTTCACGATACTGATGTGCACTGTGTCTTGTGCCCTCGTAATCCTGACGATGGTGGAAGCATTGTTCAAGATCTACAAATCTCTACCATGTTCACTCATCATCAGAAGATTATTGTGGTGGATAGCGCAATGCCAAGTGGAGATTCGGAGAAGAGGAGAATTGTGAGTTTCGTCGGTGGCCTTGATCTCTGTGATGGCAGGTATGACACACCCTTTCATTCCCTTTTCAGGACATTGGATACTGCACATCATGACGATTTCCATCAACCAAATTTTCCTGGTGCCTTAATAACAAAAGGTGGACCGAGGGAACCTTGGCACGACATCCATTCCCGACTAGAAGGGCCCATTGCCTGGGATGTCTTGTTCAATTTTGAGCAAAGGTGGAAGAAACAAGGTGGGAAGGATGTACTTGTGCAGCTACGAGAGCTTGATGAAATAATTATTCCTCCATCTCCTGTTATGTACAAAGATGACCATGATACCTGGAATGTTCAATTGTTTAGATCAATAGATGGTGGGGCAGCTTTTGGCTTTCCCGAGACCCCTGAAGATGCTGCTAAAGCTGGGCTTGTCAGTGGGAAAGATAATATTATTGATCGAAGCATTCAAGACGCTTACATTAATGCTATTCGGCGGGCTAAGAATTTCATTTATATTGAAAACCAATATTTCCTTGGAAGTTGTTTTGGATGGTCTCCTGATGATATCAAACCTGAGGATATTGGTGCCTTGCATTGTATCCCTAGAGAGCTTTCCCTTAAGATCATTAGTAAGATTGCAGCAGGAGAAAGGTTCACTGTCTATGTAGTTGTCCCAATGTGGCCAGAAGGAATACCAGAAAGTGGATCGGTTCAGGCAATATTAGATTGGCAGAGGAGGACATTTGAAATGATGTATAAAGACGTGATTGAGGCTCTTAGAGAACAAGGTATCGAGGAAGACCCTCGTAACTACTTGACGTTCTTCTGTCTTGGTAACCGGGAAGTCAAGAGGTCTGGAGAATATGAACCTGTAGAAGCACCAGAGGAGGGTTCTGATTATTTGAAAGCTCAGCAGGCCAGGCGTTTCATGATTTATGTTCACACCAAGATGATGATTGTTGATGATGAGTACATAATTGTTGGATCGGCCAATATCAACCAGAGATCCATGGATGGTGCAAGGGACTCTGAGATAGCAATGGGTGCTTTTCAGCCATATCATCTGTCAGCTCGTGAACCCGCCCGTGGTCAAATTCACGGATTCCGTATGGCTCTATGGTATGAACATCTTGGTATGCTTGACGAATGTTTCCTTCGGCCAGAAAGTGAAGAATGTGTCAAGAAGATTAACAGAATTGCTGATAAGTATTGGGATCTGTATTCAAGTGAAGAACTTGAGAGGGACTTGCCCGGTCATCTCCTCCGCTATCCCGTCGGCATATCCAGTGAAGGAAATGTCACAGAGCTCCCAGGCGTTGAGTTCTTCCCCGACACCAAAGCTCGTATACTCGGAACCAAATCCGACTACCTCCCTCCCATCCTCACTACCTAG 2427 43.55 MESISLHGTLHATIYEVDQLHHGGGANVFSKLMQNFEEAVGIGKGVTKLYATIDLEKARAGRTRILENEPSNPRWYESFHIYCAHKASNVVFTVKDDNPIGASLIGRAYVPVEDLLVGEEVDRWIPILDEEKNPIEGESKIHVKLQFFSVTKDQNWGRGIRSRKFPGVPYTYYSQRQGCKVSLYQDAHVPDNFIPKIPLAGGKNYAPSRCWEDIFDAIQNAKHMIYITGWSVYTEIALVRDSRRPKPGGDTMLGELLKKKASEGVRVLMLVWDDRTSVGLLKKDGLMATHDEETERFFHDTDVHCVLCPRNPDDGGSIVQDLQISTMFTHHQKIIVVDSAMPSGDSEKRRIVSFVGGLDLCDGRYDTPFHSLFRTLDTAHHDDFHQPNFPGALITKGGPREPWHDIHSRLEGPIAWDVLFNFEQRWKKQGGKDVLVQLRELDEIIIPPSPVMYKDDHDTWNVQLFRSIDGGAAFGFPETPEDAAKAGLVSGKDNIIDRSIQDAYINAIRRAKNFIYIENQYFLGSCFGWSPDDIKPEDIGALHCIPRELSLKIISKIAAGERFTVYVVVPMWPEGIPESGSVQAILDWQRRTFEMMYKDVIEALREQGIEEDPRNYLTFFCLGNREVKRSGEYEPVEAPEEGSDYLKAQQARRFMIYVHTKMMIVDDEYIIVGSANINQRSMDGARDSEIAMGAFQPYHLSAREPARGQIHGFRMALWYEHLGMLDECFLRPESEECVKKINRIADKYWDLYSSEELERDLPGHLLRYPVGISSEGNVTELPGVEFFPDTKARILGTKSDYLPPILTT 808
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 73083410 73087475 + Hsped.03g16180.1 Hepe03g1618 566616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe03g1618 808 PANTHER PHOSPHOLIPASE D 12 795 IPR015679 GO:0004630(PANTHER)|GO:0005886(PANTHER)|GO:0009395(PANTHER)
Hepe03g1618 808 SUPERFAMILY Phospholipase D/nuclease 151 439 - -
Hepe03g1618 808 SUPERFAMILY Phospholipase D/nuclease 448 738 - -
Hepe03g1618 808 CDD C2_plant_PLD 6 148 - -
Hepe03g1618 808 SMART pld_4 326 364 IPR001736 GO:0003824(InterPro)
Hepe03g1618 808 SMART pld_4 654 681 IPR001736 GO:0003824(InterPro)
Hepe03g1618 808 Gene3D Endonuclease Chain A 477 695 - -
Hepe03g1618 808 ProSiteProfiles C2 domain profile. 1 125 IPR000008 -
Hepe03g1618 808 PIRSF PLD_plant 1 808 IPR011402 GO:0004630(InterPro)|GO:0005509(InterPro)|GO:0016020(InterPro)|GO:0046470(InterPro)
Hepe03g1618 808 Gene3D Endonuclease Chain A 200 442 - -
Hepe03g1618 808 Pfam C2 domain 44 126 IPR000008 -
Hepe03g1618 808 CDD PLDc_pPLDalpha_2 492 701 - -
Hepe03g1618 808 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 149 IPR035892 -
Hepe03g1618 808 Pfam Phospholipase D C terminal 726 798 IPR024632 -
Hepe03g1618 808 Gene3D C2 domain 7 158 IPR035892 -
Hepe03g1618 808 Pfam Phospholipase D Active site motif 327 364 IPR001736 GO:0003824(InterPro)
Hepe03g1618 808 Pfam Phospholipase D Active site motif 656 681 IPR001736 GO:0003824(InterPro)
Hepe03g1618 808 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 326 364 IPR001736 GO:0003824(InterPro)
Hepe03g1618 808 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 654 681 IPR001736 GO:0003824(InterPro)
Hepe03g1618 808 SMART C2_3c 9 124 IPR000008 -
Hepe03g1618 808 FunFam Phospholipase D 467 700 - -
Hepe03g1618 808 FunFam Phospholipase D delta 201 444 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g1618 Hepe-Chr3:73083410 Hepe10g0187 Hepe-Chr10:1879061 1.56e-234 dispersed
Hepe02g1477 Hepe-Chr2:19180457 Hepe03g1618 Hepe-Chr3:73083410 1.52e-207 transposed
Hepe03g0480 Hepe-Chr3:7422899 Hepe03g1618 Hepe-Chr3:73083410 1.18e-240 transposed
Hepe04g1636 Hepe-Chr4:71716067 Hepe03g1618 Hepe-Chr3:73083410 1.78e-239 transposed
Hepe06g1205 Hepe-Chr6:61581699 Hepe03g1618 Hepe-Chr3:73083410 9.05e-241 transposed
Hepe10g0254 Hepe-Chr10:2651338 Hepe03g1618 Hepe-Chr3:73083410 0.0 wgd
Hepe02g1369 Hepe-Chr2:17394801 Hepe03g1618 Hepe-Chr3:73083410 0.0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe03g1618 K01115 - csv:101206113 1558.5