Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe03g1662 ATGCCGGTCGACGGCTCTTCAACTTCCTCCCCCACCGTCTGCGTCACCGGCGCCGGCGGCTTCATTGCCTCATGGATCGTCAAACTCCTCCTCCAGAAAGGCTATATCGTAAGAGGAACCGTCAGAAATCCAGAGGATCCGAAGAACGGGCATTTGAGAGAACTTGAAGGCGCGGCGGAGAGGCTGAGTTTGCATAAAGCGGATCTTCTCGATTTCGAAAGCCTGAGAGCGGCGATCAACGGCTGCGATGGTGTTTTCCACACGGCGTCGCCTGTCACTGACGATCCGGAGCAAATGGTGGAACCGGCAGTCAACGGCACAACGAACATTATAATTGCGGCGGCCGAAGCCAATGTCCGTCGCGTGGTGTTCACTTCGTCGATTGGTGCAGTCTACATGGACCCTAACCGTGGTCCAGACGAGATCGTAGACGAGTCCTGTTGGAGCGATCTCGAGTTCTGCAAGAACACCAAGAATTGGTATTGCTATGGGAAAGCTGTGGCGGAGCAGGCGGCATGGGAGGTTGCGAAGGAGAAAGGAGTGGATTTGGTGGTGGTGAATCCTGTGCTAGTGTTAGGGCCATTGTTGCAATCCACCATTAACGCGAGCATAATTCATATACTGAAGTACTTGACTGGATCAGCGAAGACGTACGTCAATTCAGTTCAGGCGTACGTGCATGTCAAGGATGTGGCTCTAGCACATATTCTCGTGTACGAGAATCCCTCCGCCGCTGGCCGGTACCTCTGCGCCGAGAGTGTGCTCCACAGGGGAGAAGTTGTTGAGATTCTGGCCAAGTTGTTCCCAGAATATCCCATTCCCACCAAGTGCTCAGATGAAGTGAACCCAAGGAAGAAGGCATACAAGTTCTCCAACCAGAAGCTTAAGGACTTGGGATTGGAATTCACTCCAACAAAGCAGTGCCTATACGACACCGTTAAGAGCCTGCAAGAGAAAGCTCATCTCCCAATTCCCACTTCTACTCAACCACCAGACTCCATTCGAATTCAATCTTAA 1017 52.31 MPVDGSSTSSPTVCVTGAGGFIASWIVKLLLQKGYIVRGTVRNPEDPKNGHLRELEGAAERLSLHKADLLDFESLRAAINGCDGVFHTASPVTDDPEQMVEPAVNGTTNIIIAAAEANVRRVVFTSSIGAVYMDPNRGPDEIVDESCWSDLEFCKNTKNWYCYGKAVAEQAAWEVAKEKGVDLVVVNPVLVLGPLLQSTINASIIHILKYLTGSAKTYVNSVQAYVHVKDVALAHILVYENPSAAGRYLCAESVLHRGEVVEILAKLFPEYPIPTKCSDEVNPRKKAYKFSNQKLKDLGLEFTPTKQCLYDTVKSLQEKAHLPIPTSTQPPDSIRIQS 338
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 73479061 73484345 + Hsped.03g16620.1 Hepe03g1662 566660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe03g1662 338 Gene3D - 4 337 - -
Hepe03g1662 338 CDD FR_SDR_e 13 300 - -
Hepe03g1662 338 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 317 IPR036291 -
Hepe03g1662 338 Pfam NAD dependent epimerase/dehydratase family 13 245 IPR001509 -
Hepe03g1662 338 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 12 315 IPR050425 GO:0016616(PANTHER)
Hepe03g1662 338 FunFam Cinnamoyl-CoA reductase 1 4 335 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g1300 Hepe-Chr2:16492509 Hepe03g1662 Hepe-Chr3:73479061 6.12e-188 dispersed
Hepe02g1301 Hepe-Chr2:16508689 Hepe03g1662 Hepe-Chr3:73479061 2.94e-181 dispersed
Hepe01g1194 Hepe-Chr1:77129957 Hepe03g1662 Hepe-Chr3:73479061 8.04e-75 transposed
Hepe07g0560 Hepe-Chr7:6006051 Hepe03g1662 Hepe-Chr3:73479061 2.88e-80 transposed
Hepe07g1111 Hepe-Chr7:19156738 Hepe03g1662 Hepe-Chr3:73479061 1.06e-47 transposed
Hepe08g0135 Hepe-Chr8:1133826 Hepe03g1662 Hepe-Chr3:73479061 5.03e-92 transposed
Hepe08g0360 Hepe-Chr8:3241114 Hepe03g1662 Hepe-Chr3:73479061 9.81e-75 transposed
Hepe10g1354 Hepe-Chr10:49771651 Hepe03g1662 Hepe-Chr3:73479061 4.11e-93 transposed
Hepe02g1297 Hepe-Chr2:16345609 Hepe03g1662 Hepe-Chr3:73479061 6.67e-175 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe03g1662 K09753 - csv:101213412 622.468