Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe03g1669 ATGGGAATATATCTCAGCTCCCCCAAAACAGAAAAGGCCTCGGATGATGGCGAGAACGAAAGCCTTCGGTACGGCGTATCCTCTATGCAAGGGTGGCGTGCAACCATGGAAGATGCTCATGCAGCCTGTCTAGATTTGGACACATCAACATCTTTCTTTGGCGTTTATGATGGCCATGGAGGTAAAGCAGTTTCTAAGTTCTGTGCCAAGTATCTTCACCGACAGGTGCTCAAGCATGAATCATACATGGCTGGAGATTTGGGAACTTCAGTACAGAAGGCCTTTCTCAGGATGGATGAGATGATGCTTGGACAACGAGGATGGAGAGAATTAGCTATTTTGGGAGACAAAATGGACAAGATTTCTGGTATGATAGAAGGATTTATATGGTCGCCCAGGAGTAGTGAAGCTAACAACCAAGTGGATGATTGGTCTCCGGAGGAGGGACCTCACTCTGACTTTCATGGACCAAATGCTGGAAGCACAGCTTGTGTTGCAATAATACGAAATAACCAACTTGTGGTGGCAAATGCTGGTGATTCTCGCTGTGTCATTTCCAGAAAGGGCCAGGCATATAATTTATCTAAAGATCACAAGCCTGATCTTGAGGTTGAGAAGGACAGGATTCTGAAAGCCGGTGGTTTCATCCGAGTTGGCCGTGTCAATGGAAGTCTCAACTTGGCACGGGCTATAGGAGACATGGAATTTAAGCAGAATAAAAGTATGCCTGTAGAAAAGCAGATTGTAACTGCCAACCCAGATGTAACAACTGTACGTGTTAATGGTTTCAAATTTCAATATTTATATATGTTTATATGTATTCTTTTAATTATTGTTATGCAGCGATTTTTCTAG 855 43.39 MGIYLSSPKTEKASDDGENESLRYGVSSMQGWRATMEDAHAACLDLDTSTSFFGVYDGHGGKAVSKFCAKYLHRQVLKHESYMAGDLGTSVQKAFLRMDEMMLGQRGWRELAILGDKMDKISGMIEGFIWSPRSSEANNQVDDWSPEEGPHSDFHGPNAGSTACVAIIRNNQLVVANAGDSRCVISRKGQAYNLSKDHKPDLEVEKDRILKAGGFIRVGRVNGSLNLARAIGDMEFKQNKSMPVEKQIVTANPDVTTVRVNGFKFQYLYMFICILLIIVMQRFF 284
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 73536757 73541921 - Hsped.03g16690.1 Hepe03g1669 566667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe03g1669 284 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169(InterPro)
Hepe03g1669 284 SMART PP2C_4 13 279 IPR001932 -
Hepe03g1669 284 MobiDBLite consensus disorder prediction 1 20 - -
Hepe03g1669 284 Pfam Protein phosphatase 2C 23 103 IPR001932 -
Hepe03g1669 284 Pfam Protein phosphatase 2C 155 261 IPR001932 -
Hepe03g1669 284 PANTHER PROTEIN PHOSPHATASE 2C 19 261 IPR015655 GO:0004722(InterPro)|GO:0006470(PANTHER)|GO:0006470(InterPro)
Hepe03g1669 284 ProSiteProfiles PPM-type phosphatase domain profile. 23 284 IPR001932 -
Hepe03g1669 284 Gene3D - 1 271 IPR036457 -
Hepe03g1669 284 SUPERFAMILY PP2C-like 3 261 IPR036457 -
Hepe03g1669 284 CDD PP2Cc 23 261 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g1669 Hepe-Chr3:73536757 Hepe03g1809 Hepe-Chr3:75003845 6.53e-20 dispersed
Hepe01g1955 Hepe-Chr1:84375311 Hepe03g1669 Hepe-Chr3:73536757 3.12e-159 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe03g1669 K17499 - csv:101214132 510.76