Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe03g1708 ATGGAGCTTGGCCTGAGCTTGGGCGACGCCCCCAGGCCCTTCCGCTTTGTCGAGAAGCAACCGCAACCACCTCCGCCGCAGCGCGGCCTTTCCCGTCCAGATTTAGGTTTCTGCGTCGACTTATCGATCGGCCGTCCGGTCGCTGGAGATAAAGAAGACGACGAGGAAATACCTAATCAGAGAGAAGATGAATCCGACGGAAATGAAGATCCACCGATTCAACTCGATCTTCTTCCTCACAATCCCGTTCCTCGAAACCTAACAAATCCGTACCAAGGATTCCCATGGCCGTCGTCCGAAAACGATGAAGGCGAAGATCGAACCGCGTCGCCGAACAGCGCAGCGTCGTCGTTTCAGATGGAATTCGGACTGTACGGCGGCGGAGGGAACATCTCTTCCCGGCGAGATCAAATCGAAAATGGCGTAATGAACGAAGTAGGCGAATCTGAGAGAGCGTCTTCACGAGCTAGCGACGATGAAGAAAATGGCTCAACGAGGAAGAAACTCAGACTCTCGAAAGAACAATCCGCTTTCCTCGAAGAGAGCTTCAAAGAACACAACACCTTGAATCCTAAACAGAAAATCGCACTCGCAAAGCAACTGAATCTTCGTCCTCGTCAAGTGGAAGTTTGGTTTCAAAACAGAAGGGCTAGGACGAAATTGAAGCAAACAGAAGTGGATTGTGAGTATTTGAAACGATGCTGCGAAACATTAACAGAAGAGAACAGACGGCTTCAAAAGGAACTCCATGAATTAAGAGCTTTGAAATCTACGAATTCATTCTACATGCAATTACCAGCTACAACTCTCACCATGTGTCCTTCTTGTGAAAAAGTGACCTCAACGTCGGCCGGCGCCACCGCAGGAGGTGGTGCCGGCGCCGGAAAAACGACGGAGGCAGTTTCGAAACGATCCGGATTCCCATTTTCTGCTGCTAGAACGCAGACCCACCAGTCAACAGCTTCATGA 969 50.46 MELGLSLGDAPRPFRFVEKQPQPPPPQRGLSRPDLGFCVDLSIGRPVAGDKEDDEEIPNQREDESDGNEDPPIQLDLLPHNPVPRNLTNPYQGFPWPSSENDEGEDRTASPNSAASSFQMEFGLYGGGGNISSRRDQIENGVMNEVGESERASSRASDDEENGSTRKKLRLSKEQSAFLEESFKEHNTLNPKQKIALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELHELRALKSTNSFYMQLPATTLTMCPSCEKVTSTSAGATAGGGAGAGKTTEAVSKRSGFPFSAARTQTHQSTAS 322
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 74003902 74006483 + Hsped.03g17080.1 Hepe03g1708 566706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe03g1708 322 Gene3D - 170 220 - -
Hepe03g1708 322 MobiDBLite consensus disorder prediction 151 169 - -
Hepe03g1708 322 MobiDBLite consensus disorder prediction 308 322 - -
Hepe03g1708 322 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 55 296 IPR050762 -
Hepe03g1708 322 Pfam Homeobox associated leucine zipper 222 256 IPR003106 GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe03g1708 322 CDD homeodomain 166 223 IPR001356 GO:0003677(InterPro)
Hepe03g1708 322 ProSitePatterns 'Homeobox' domain signature. 197 220 IPR017970 GO:0000981(InterPro)|GO:0006355(InterPro)
Hepe03g1708 322 FunFam Homeobox-leucine zipper protein 18 150 227 - -
Hepe03g1708 322 SUPERFAMILY Homeodomain-like 157 223 IPR009057 -
Hepe03g1708 322 MobiDBLite consensus disorder prediction 144 169 - -
Hepe03g1708 322 MobiDBLite consensus disorder prediction 283 322 - -
Hepe03g1708 322 Pfam Homeodomain 166 220 IPR001356 GO:0003677(InterPro)
Hepe03g1708 322 MobiDBLite consensus disorder prediction 1 113 - -
Hepe03g1708 322 SMART HOX_1 164 226 IPR001356 GO:0003677(InterPro)
Hepe03g1708 322 Coils Coil 228 258 - -
Hepe03g1708 322 SMART halz 222 265 IPR003106 GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe03g1708 322 ProSiteProfiles 'Homeobox' domain profile. 162 222 IPR001356 GO:0003677(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g1708 Hepe-Chr3:74003902 Hepe04g1352 Hepe-Chr4:69173731 1.19e-62 dispersed
Hepe09g0430 Hepe-Chr9:3892704 Hepe03g1708 Hepe-Chr3:74003902 1.95e-50 transposed
Hepe02g1268 Hepe-Chr2:15816742 Hepe03g1708 Hepe-Chr3:74003902 1.08e-59 wgd
Hepe03g1708 Hepe-Chr3:74003902 Hepe05g0516 Hepe-Chr5:7049597 1.34e-81 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55310 PF00046 Homeodomain 1.40E-15 CL0123 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe03g1708 K09338 - csv:101221600 545.814