Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe03g1745 ATGGAAACAGGAGAATCTGTGGCAAAGGTTATAAAGAACATGGACCCCCACGGCTGTCAAATATGTGGAGACAATGTCGGGAAGACCGACGAGAGCGAACCGTTTGTTGCTTGCAATGTTTGCACATTTCCGGTTTGCAGACCATGCTATGAGTACGAGAGAAAAGATGGGAATCAGTCTTGTCCTAAATGCAAAAGCAGATACAAGAGGCACAATGGAAGTCCTGCTGTTCTTGGTGATGAAGAGGATGCTGTGCTTGGTGATGATGATGATGCCATTATTGATTTAAATTACATTTCTGAAAGTCAAAAACAGAAGCAGAAGATTGCGGAGCGTATGATGAGCTGGCAGATGGAATATGGACAAGCACAAGATCTCCCGCCTCCAAATTACGACAAGGAAGTTTCTATAAATCACATTCCCTTGCTCACCAATGGGCAGGAGGTTTCTGGAGAACTTTCAGCTGCATCGCCCGAGCATCATTTGATGGCATCTCGTGGGAAGCCCATATATTCTCTTCCTTATGCAGCCGATATTAACCAATCACTTAATGTGCAAGGCGTGGACCCTACAAAAGAGTATAACTCATCAGGGCTAGGCAATGTAGCTTGGAAAGAGAGAGTTGATGGCTGGAAGATGAAACAGGAGAGGAATCTTGTACCAATGAGCACAGCCCATGCTGCATCTGAAAGGGGAGGTGGAGATATTGATGCCTGCACAGATATTCTTGTTGATGACTCCTTACTAAATGATGAAGCTCGCCAGCCTCTCTCGCGAAAGGTTTCTGTTCCATCATCTAGGATAAACCCTTACCGAATGGTGATTGTTCTGCGGCTTGTGATTCTTTGTTTTTTCTTGCACTACCGAATAACAAATCCAGTACGCAATGCATACGCTCTATGGCTGATATCTGTTATATGTGAGATTTGGTTTGCAATATCCTGGATATTAGATCAGTTCCCAAAGTGGCTTCCTGTAAACCGTGAAACATATCTTGATCGGCTTGCATTAAGATATGATAGGGAAGGAGAACCATCACAGCTTGCTGCTGTTGACATTTTTGTGAGTACGGTTGACCCTCTGAAGGAGCCTCCACTTGTCACAGCCAACACCGTGCTATCTATTCTCGCTGTTGACTACCCAGTTGACAAGGTTTCGTGCTATGTCTCTGATGATGGAGCTGCCATGTTGACATTTGAAGCATTATCCGAGACATCAGAGTTTGCAAAGGTATGGGTGCCTTTCTGCAAGGAATACAACATCGAGCCTCGGGCTCCAGAATGGTACTTCGCTCAGAAAATTGATTACTTGAAGGATAAAGTCGAGCCATCATTTGTCAAAGATCGAAGAGCAATGAAGAGAGAATATGAGGAATTTAAGGTTCGCATCAACAGTCTGGTATCAAAGGCGCAGAAGGTTCCTGAAGAAGGATGGATCATGCAAGATGGAACTCCGTGGCCCGGAAATAATATTAGAGACCATCCAGGAATGATTCAGGTTTTCTTAGGCCAAAACGGTGGACTGGATTCTGAAGGTCGCGAGTTGCCTCGTTTAGTCTATGTATCTCGTGAAAAACGTCCAGGATTCCAACATCATAAGAAAGCTGGTGCAATGAATGCTCTTGTTCGAGTGTCTGCTGTCCTTACTAATGGCCCGTTTTTGTTGAATCTTGACTGTGATCACTACATAAACAATAGCCAGGCATTGAGGGAAGCAATGTGTTTCATGATGGATCCAAACCTTGGCAAATACGTCTGTTATGTTCAGTTTCCTCAAAGATTTGACGGTATTGATAGGAACGATCGATATGCCAACCGTAATACCGTTTTCTTTGATATAAATTTAAGAGGTTTAGATGGCCTTCAAGGTCCAGTTTATGTGGGCACTGGATGTGTCTTCAACAGAACTGCTCTGTATGGTTATGAACCTCCTCACAAACCGAAGCATCGGAAACCAGGGTTTCTGTCTTCGCTCTGTGGCGGTTCTCGAAAGAAGAGTTCAAAATCAAGTAAGAAGAGTCCAGACAAGAAGAAATCAAGCAGGCCTGTAGACCCGACAGTGCCCATTTTCACTCTCGACGACATTGAAGAAGTGGTTGAAGGTGCTGGATTTTATGATGAGAAGTCACTGCTAATGTCGCAAATGACCCTGGAGCAAAGGTTTGGCCAGTCTGCTGTTTTTGTTGCTTCAACCCTTATGGAAAACGGTGGCGTTCCTCAATCCGCAACGCCCGAGTCTCTTCTGAAGGAGGCTATTCATGTTATCAGCTGTGGATATGAAGACAAAACTGACTGGGGAACTGAGATAGGATGGATTTATGGCTCTGTCACTGAAGATATCCTTACAGGATTCAAGATGCATGCCCGTGGTTGGCGGTCGATTTATTGCATTCCTAAGCGTCCCGCCTTTAAAGGGTCTGCCCCTATCAATCTTTCAGATCGATTAAACCAAGTGCTTCGATGGGCCCTCGGTTCCGTGGAGATTCTCCTGAGTAGGCATTGCCCTATCTGGTATGGCTATGGAGGAAGACTCAAATGGCTCGAAAGGTTCGCATATATAAACACTACAATCTATCCGATCACCGCCATTCCTCTTCTTATGTATTGTACCTTACCAGCCGTGTGTCTGCTGACGAACAAATTCATTATTCCCCAGATTAGTAACATTGCAAGTATATGGTTCATAGCCCTCTTCCTCTCCATCTTTGCAACTGGCATTCTCGAGATGAGATGGAGCGGGGTTGGAATCGACGAGTGGTGGAGAAACGAACAATTTTGGGTCATTGGTGGTGTTTCAGCTCACCTGTTTGCTGTTTTCCAAGGTCTGCTCAAGGTTCTCGCTGGAATCGATACCAACTTCACAGTCACGTCCAAGGCATCGGATGAAGATGGTGACTTTACCGAGCTTTACATGTTCAAATGGACGACTCTTCTCATTCCACCAACAACACTCCTCATAGTAAACTTGGTTGGGGTCGTTGCGGGGATATCTTATGCAATCAACAGCGGATACCAATCATGGGGACCGCTGTTTGGCAAGCTATTCTTCGCCTTTTGGGTGATCATTCATCTCTATCCATTCTTGAAAGGTTTGATGGGTCGCCAAAACAGAACGCCTACCATCGTCGTAGTGTGGTCGATCCTGCTTGCTTCCATCTTCTCGTTGTTATGGGTGAGGATCGATCCGTTCACTACATCAGTCACAGGTCCCGACATCGAGCAGTGTGGCATCAACTGCTAG 3240 45.28 METGESVAKVIKNMDPHGCQICGDNVGKTDESEPFVACNVCTFPVCRPCYEYERKDGNQSCPKCKSRYKRHNGSPAVLGDEEDAVLGDDDDAIIDLNYISESQKQKQKIAERMMSWQMEYGQAQDLPPPNYDKEVSINHIPLLTNGQEVSGELSAASPEHHLMASRGKPIYSLPYAADINQSLNVQGVDPTKEYNSSGLGNVAWKERVDGWKMKQERNLVPMSTAHAASERGGGDIDACTDILVDDSLLNDEARQPLSRKVSVPSSRINPYRMVIVLRLVILCFFLHYRITNPVRNAYALWLISVICEIWFAISWILDQFPKWLPVNRETYLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFAKVWVPFCKEYNIEPRAPEWYFAQKIDYLKDKVEPSFVKDRRAMKREYEEFKVRINSLVSKAQKVPEEGWIMQDGTPWPGNNIRDHPGMIQVFLGQNGGLDSEGRELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSQALREAMCFMMDPNLGKYVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGLQGPVYVGTGCVFNRTALYGYEPPHKPKHRKPGFLSSLCGGSRKKSSKSSKKSPDKKKSSRPVDPTVPIFTLDDIEEVVEGAGFYDEKSLLMSQMTLEQRFGQSAVFVASTLMENGGVPQSATPESLLKEAIHVISCGYEDKTDWGTEIGWIYGSVTEDILTGFKMHARGWRSIYCIPKRPAFKGSAPINLSDRLNQVLRWALGSVEILLSRHCPIWYGYGGRLKWLERFAYINTTIYPITAIPLLMYCTLPAVCLLTNKFIIPQISNIASIWFIALFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFTELYMFKWTTLLIPPTTLLIVNLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIIHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRIDPFTTSVTGPDIEQCGINC 1079
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 74335562 74342563 - Hsped.03g17450.1 Hepe03g1745 566743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe03g1745 1079 Pfam Zinc-binding RING-finger 10 83 IPR027934 -
Hepe03g1745 1079 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 271 1048 - GO:0005802(PANTHER)|GO:0005886(PANTHER)|GO:0009833(PANTHER)|GO:0016759(PANTHER)|GO:0030244(PANTHER)
Hepe03g1745 1079 MobiDBLite consensus disorder prediction 644 685 - -
Hepe03g1745 1079 SUPERFAMILY Nucleotide-diphospho-sugar transferases 365 901 IPR029044 -
Hepe03g1745 1079 Coils Coil 449 469 - -
Hepe03g1745 1079 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 478 642 IPR029044 -
Hepe03g1745 1079 CDD mRING-HC-C4C4_CesA 19 67 - -
Hepe03g1745 1079 Pfam Cellulose synthase 351 1072 IPR005150 GO:0016020(InterPro)|GO:0016760(InterPro)|GO:0030244(InterPro)
Hepe03g1745 1079 SUPERFAMILY RING/U-box 6 85 - -
Hepe03g1745 1079 FunFam Cellulose synthase 468 642 - -
Hepe03g1745 1079 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 94 IPR013083 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g2033 Hepe-Chr1:85034194 Hepe03g1745 Hepe-Chr3:74335562 0.0 dispersed
Hepe03g1745 Hepe-Chr3:74335562 Hepe04g0384 Hepe-Chr4:52598062 0.0 dispersed
Hepe03g1745 Hepe-Chr3:74335562 Hepe07g1844 Hepe-Chr7:61367337 3.64e-292 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe03g1745 K10999 - csv:101206590 2070.05