Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe03g1756 ATGGCGAGGACTAGGGTTCATGAGCCATCGCGATCGTTAAGAGGTGATAGATGCACGGTTCGCTTGACTGAAATTTTTGGCAGGGCGACCAAATCTATTTTGGGCTTCTTTCTCATGGTGGGTCTTTGCAATGGCGTGCATTACCTTATGAGGCCCTTTTCTCAACCTCGCATTGCCTCTGATACGATCGTAGGTATGGTTGTTGGCAACTTCATGAGGAAAGAACTTGATTTATCAACGATGAAGACGCTGCGTTATATCGTTGACTTTGGTATGATATGCTATATGTTTGTGTTGGGATTGGAGATGGATCCATATGTACTCTTCAAAGCACCTACACGTGATGCTAAAGTAGCTTATGCTGGAATGATTTCGACACTCATCTTAGCCTGTTCCATAACCCCATTTTTCCACTTTTCAAAGACGAAAGAGATCAGTTTCATCCTCTCCCTCTCAACTGTCCTCTCTAGCACCGCTTCTCCTGTGCTAACCCGTTTGATCACAAGTCTTAAAATAGGCAGGTCAGATATAGGCCGGCTCGTTATTGCTGCTGGAATGCATTCTGATTTTATATCCACTCTCATTATCTGTATTGGTTATCTCTTTTGCAAATGCCAAGAGACACGCCTCTCATTTTTTAAAGGGTTTCAATTAGGTGTTGTGTTAATATTTCAGACAATAGTCACAGCGAAGGTTTCACCGGTATTCATGAACTGGGTAAATAACGAAAACCCCGAGGGTAAACCGATGAAAGGTCCTCATCTGGTTCTTGCAGTTGCTTTCATGGCCTTCCTTTGCAGCTGCCCTACTATGTTTGGTTACAATCCGATTCTCAGTGCATTCTTAGCTGGAACGTTTTTACCTCGAGAAGGTAGAGTATCAAGATGGGCAGTTGGAAAAATTAACTACCTGCTTACTACCGTTTTCTATCCCATCTTCTTCTTTTGGATGGGGGTTGAATCCAAGTTGACTGACTTTGAGCCTGGACAAATGATGACATGGGTCAGGTTACTTCTGCTTTTTGCTATTGTAACCGTAGGAAAAGTTGTTGGCACTGTCATTGCTGGGGTAATTTTGGGGTTTCATTGGCCTGAATCAGTAGCACTTGGGCTGCTGCTAACCATGAAGGGACATTTTCATATATACTTGGCCATTGCTGCAAAAACAGCTGGAAAGACTTCTACATCTACGACCATTGTGATGGTAATTGTAACCTTCTTCACAGTTGTGCATGCTCCAAACGTTGTAGCACACATAATCAAAACGGCAAGGAAACGCACACCTACACATCGAATGGCACTCCAACTGCTTGATCCATCAAGTGAGCTTAAGATCTTGTTATGTATACATGGACTTCAGAACACTGCAGCAGCCATTAACATCATGGAGATTTCTCGGGGGACTGCTAACCCTGGAGTTGTTGTATATGTCACAGACATGATTGAACTTACAGATGAAGTAGCAGCCACATTAGTGCAAGGTGAAGGAGTGGACACGGTGACTGTAACCCACCCGGGAGTGACACAAATAAGAGACGAAATTACTGCTGCAGTTCAGAGCTATGTAGATGAAAATGGAGAAGGAATTACCCTTAGAAGAATGTTAGCTCTCTCAACATTCAATTCTATGGCTCAGGACGTTTGCATTTTGGCAGAGGAATTGTTGGGAGCTATTATCATACTGCCATTCCACAAGAGCCAGCGTGGAGATGGGTCGTTGAGTGAAGGCCACACAGGTTTCCGCTATGTAAACCGCAAGGTTCTCAGGCACGCCCCCTGCTCTGTGGGAATTCTAGTGGATCGAGGTCTTGGATCAGTAGAGAAAATTTCAAGGTCTTATGTATCTCAGAATGTGGCAGTTATCTTCATTGGCGGTAAAGACGACCGAGAAGCACTAGCCTACGCTGGTCGAGTAGCAAGGCATCCCGGAGTTAAACTCTCTGTGATTAGATTCCTGGTGGATGCCGATGCAGAAAATGCTGCAAGAAGAGCTGGGACTTATAGGATAAGTGTAGCTGAGCAAGAAGAGATAATGAGACTAGACGATGAATGCTTTGCCTATTTTTACGAACGGCATGTGGCCGGTGGGCACGTCGCTTATGTCGAAAAACACCTTGCCAGTTCCTCCGAGACGTATTCTACATTGAAATCACTGGAAGGACAATATGCACTCATAATCGTCGGTCGAGGTGGGGGGGTCAACTCGGTGTTAACTTTTGGGATGAATGACTGGCAACAATGTCCAGAACTGGGTCCTATAGGGGATGTTCTTTCCGGGTCTGAATTCTCTGTTAGGACCTCAGTTTTGATCATCCAACAACACATTCTAAAAGGAGAACTAGATGGACTTGATGATGATTTTTCCATTATGTAG 2373 44.37 MARTRVHEPSRSLRGDRCTVRLTEIFGRATKSILGFFLMVGLCNGVHYLMRPFSQPRIASDTIVGMVVGNFMRKELDLSTMKTLRYIVDFGMICYMFVLGLEMDPYVLFKAPTRDAKVAYAGMISTLILACSITPFFHFSKTKEISFILSLSTVLSSTASPVLTRLITSLKIGRSDIGRLVIAAGMHSDFISTLIICIGYLFCKCQETRLSFFKGFQLGVVLIFQTIVTAKVSPVFMNWVNNENPEGKPMKGPHLVLAVAFMAFLCSCPTMFGYNPILSAFLAGTFLPREGRVSRWAVGKINYLLTTVFYPIFFFWMGVESKLTDFEPGQMMTWVRLLLLFAIVTVGKVVGTVIAGVILGFHWPESVALGLLLTMKGHFHIYLAIAAKTAGKTSTSTTIVMVIVTFFTVVHAPNVVAHIIKTARKRTPTHRMALQLLDPSSELKILLCIHGLQNTAAAINIMEISRGTANPGVVVYVTDMIELTDEVAATLVQGEGVDTVTVTHPGVTQIRDEITAAVQSYVDENGEGITLRRMLALSTFNSMAQDVCILAEELLGAIIILPFHKSQRGDGSLSEGHTGFRYVNRKVLRHAPCSVGILVDRGLGSVEKISRSYVSQNVAVIFIGGKDDREALAYAGRVARHPGVKLSVIRFLVDADAENAARRAGTYRISVAEQEEIMRLDDECFAYFYERHVAGGHVAYVEKHLASSSETYSTLKSLEGQYALIIVGRGGGVNSVLTFGMNDWQQCPELGPIGDVLSGSEFSVRTSVLIIQQHILKGELDGLDDDFSIM 790
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 74440533 74445947 - Hsped.03g17560.1 Hepe03g1756 566754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe03g1756 790 Gene3D - 29 429 IPR038770 -
Hepe03g1756 790 PANTHER CATION/H + ANTIPORTER 37 774 IPR050794 GO:0006885(PANTHER)|GO:0012505(PANTHER)|GO:0015672(PANTHER)
Hepe03g1756 790 Pfam Sodium/hydrogen exchanger family 49 419 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
Hepe03g1756 790 FunFam Cation/H(+) antiporter 28 30 429 - -
Hepe03g1756 790 Gene3D - 444 743 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g1756 Hepe-Chr3:74440533 Hepe08g1241 Hepe-Chr8:13197270 2.05e-110 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe03g1756 K26731 - csv:101211645 1392.87