Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe03g1771 ATGGCGGAATCCGAGCGTCGCGCGAAACGCCCTAGAATTACGAGGGGGGAAGATGATTATATGCCTGGAAGTATAGTTGAGATTGAGCTTCATAACTTTATGACCTTTAACCACTTGAAATGTAAACCAGGATCACGTCTAAACCTTGTAATTGGGCCCAATGGATCTGGTAAAAGCTCTATTGTATGTGCTATTGCCCTTGGCCTTGGTGGTGAGCCCCAGCTCCTTGGAAGGGCGACCAGTGTTGGAGCATATGTAAAGCGTGGGGAGGAGTCTGGTTATGTTAGAATAACCTTGAGAGGGAATACTAAAGAGGAGAAGATTACGATTACACGTAAAATGGACACACATAACAAATCTGAGTGGTTGTTCAATGGAAAAGTTGTGCCAAAAAAAGACGTAGCTGGAATCATTCAAAGGTTTAACATTCAAGTTAATAATTTGACTCAATTCTTACCTCAGGACAGGGTTTGTGAGTTTGCCAAATTAACTCCTGTGCAACTTCTAGAAGAGACTGAAAAGGCAGTTGGTGATCCTCAACTTCCAATCCTACATCGTGGACTTGTTCAGAAAAGTCATGACATAAAAAATATAGAACGAGCTGTTGAGAAAAATGGAGACACCCTAGATCAGCTAAAGGCATTAAATGTCGAGCAGGAGAAAGATGTTGAGCGTGTTCGTCAAAGAGATGAACTTTTAAAAAAGGTTGAATCCATGAAAAAGAAACTGCCATGGCTGAAGTATGACATGAAAAAGGCTGAATATATAGAAGTCAAGGAAAAGGAAAAGGAGGCCAAAAAGAAGTTGGATGAAGCTGCTAACATTTTGAATGATTTAAAGGAGCCAATTGAGAAACAAAAAAAGGAGAAGGCAAAGTTGGATGCTAAAACTAAAAAGTACAACACTCTCATTAATGATAATCACAAGAAAAGGATGGAACTTCAGGAAACTGAAAACCGTTTGGGGGTACAAATGCAAGGAAAGTTGAAAGAAATGGAAGACTTAAGGAAACAAGAAGAATATCGTCAACAGAGAATCTTACGAGCTAAAGAGGAACTCGAAGCTGCTGAATTGGAACTTCAAAATTTGCCTCCTTACGAACATCCCAAGGATGAGATTGAACGATTGCGTGCTCAAATTTTGGAGCTGGAAGTTTGTGCAAGTCAGAAGAGACATATGAAGTCAGAGATTGAAAAGAATATATCCCAAAAAAGAATTACTTTGAGGCAATGCTTGGATAGGTTAAGAGATATGGAGAATACTAATACAAAACTACTACAGGCATTGAGAAATTCTGGAACAGAGAAGATTTTTGAAGCTTATCATTGGCTTCAAGAACATCGCCATGAGTTCAAGAAGGAGGTGTATGGTCCAGTGTTGCTAGAGGTTAATGTATCAAATCGGACGCATGCTGACTACTTAGAAGGTCATATTCCATTATATGTCTGGAAGTCCTTCATAACTCAAGATTCTGATGATCGTGACATTATGGTAAAAAACTTGGGTTCATTTGGCGTTCCTGTCTTAAACTATGTGGGAGGTGAAAGCCGCACAAATCAGCATTTTGAGGTTTCTGAGGAGGTTCGTGCATTTGGCATATATTCTCGGCTAGACCAAATTTTTGATGCTCCTGCAGCTGTAAAGGAGGTTTTGACCACGCAGTTTTGTTTGGACCATTCATATATTGGGTCAAAGGTAACTGATCAGAAGGCAGATGAGGTCTCAAAATTGGGAATTTTAGATTTTTGGACTCCAGATAATCATTATCGATGGTCTCGCTCTAGATATGGTGGTCATATGTCTGGAAATGTGCAACTCGTTGACCGCTCACGTCTTCTTCTGTGCAACTTGGATGCGGGAGAAATTGATGGGCTTCGGTCCAGGAAAAATGAGCTAGAAGAATCTGTTTCTGCCTTAGAAGAAAACTCTAAATTATGTCAGATTGAGCTAAGATTGATAGAGGATGAAGAAGCTAAACTTCGCAAACATCGGGATGACATTTTAAGTACTGTGCAACATGAGAAGAGAAAACGCCGTGAAATGGAAAATCGCATTGATCAAAGGAAAAAGAAATTAGAATCTATGGAGCGGGAAGATGATCTGGATACTGTTGTGGCCAAGCTTGTCGATCAAGCTGCAAATTTTAACATTCAAAGGTTCCATTGTGCAATTGAAATTAAGCATTTGCTTGTTGAGGCCGTTTCTTATAGACAGGGCTTGACTAAGAACCATATGTCCTCCATTGAAATTGAAGCAAAGATCAGAGAATTGGAGGTAAATCTGAAGCAGCATGAAAAGTCTGCTCTGCAAGCGTCGGTGCAGTTCGAGTACTGCAAGAAGGAAGTTGAGGACTATCGACAGCAACTTTCAGTTGCCAAGAAGCATGCAGAATCTATTGCCGTGATCACACCTGACCTTGAGAAGGAATTTCTTGAGATGCCTACTACAATTGAGGAATTGGAGGCTGCTATTCAAGATAATATTTCTCAAGCTAATTCCATTCTATTCTTAAACCACAATGTGCTGGAGGAATATGAACATCGTCAGCGTCAGATAAATACCATTGCATGCAAACTAGAAGCTGATAAACATGAACTAAGGAAGTGTATGGCTGAAGTTGAGGAGTTGAAGGGAAATTGGCTTCCAACATTAAGAAAACTTGTTTCTCAGATAAATGAGACTTTTAGTCGCAATTTTCAAGAGATGGCTGTTGCTGGAGAAGTGTTATTGGATGAGCATGATATGGACTTCGATCAATTTGGGATACTTATTAAAGTGAAGTTCAGACAAGCAAGTCAGCTTCAGGTTCTCAGTGCACATCATCAATCTGGAGGGGAACGCTCGGTGTCGACAATTCTGTATCTTGTTTCCCTTCAAGACCTTACCAACTGCCCATTTAGAGTAGTTGACGAGATAAACCAAGGAATGGATCCCATAAATGAACGGAAGATGTTCCAGCAATTGGTGAGAGCTGCCAGCCAAACAAATACACCACAGTGTTTCCTACTTACTCCAAAGTTACTTCCTGAGTTGGAATATAGTGAGGCCTGTAGTATATTGAATATAATGAATGGTCCTTGGATCGAGCAGCCCTCGAGAGCATGGAGCAATGGAGATAGCTGGGGAACGTTGATGAACTACGTAGGAGAAAGCCGATGTTGA 3162 40.54 MAESERRAKRPRITRGEDDYMPGSIVEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGNTKEEKITITRKMDTHNKSEWLFNGKVVPKKDVAGIIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPILHRGLVQKSHDIKNIERAVEKNGDTLDQLKALNVEQEKDVERVRQRDELLKKVESMKKKLPWLKYDMKKAEYIEVKEKEKEAKKKLDEAANILNDLKEPIEKQKKEKAKLDAKTKKYNTLINDNHKKRMELQETENRLGVQMQGKLKEMEDLRKQEEYRQQRILRAKEELEAAELELQNLPPYEHPKDEIERLRAQILELEVCASQKRHMKSEIEKNISQKRITLRQCLDRLRDMENTNTKLLQALRNSGTEKIFEAYHWLQEHRHEFKKEVYGPVLLEVNVSNRTHADYLEGHIPLYVWKSFITQDSDDRDIMVKNLGSFGVPVLNYVGGESRTNQHFEVSEEVRAFGIYSRLDQIFDAPAAVKEVLTTQFCLDHSYIGSKVTDQKADEVSKLGILDFWTPDNHYRWSRSRYGGHMSGNVQLVDRSRLLLCNLDAGEIDGLRSRKNELEESVSALEENSKLCQIELRLIEDEEAKLRKHRDDILSTVQHEKRKRREMENRIDQRKKKLESMEREDDLDTVVAKLVDQAANFNIQRFHCAIEIKHLLVEAVSYRQGLTKNHMSSIEIEAKIRELEVNLKQHEKSALQASVQFEYCKKEVEDYRQQLSVAKKHAESIAVITPDLEKEFLEMPTTIEELEAAIQDNISQANSILFLNHNVLEEYEHRQRQINTIACKLEADKHELRKCMAEVEELKGNWLPTLRKLVSQINETFSRNFQEMAVAGEVLLDEHDMDFDQFGILIKVKFRQASQLQVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQTNTPQCFLLTPKLLPELEYSEACSILNIMNGPWIEQPSRAWSNGDSWGTLMNYVGESRC 1053
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 74605876 74627281 + Hsped.03g17710.1 Hepe03g1771 566769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe03g1771 1053 Coils Coil 408 428 - -
Hepe03g1771 1053 FunFam Structural maintenance of chromosomes 5 849 1020 - -
Hepe03g1771 1053 Coils Coil 300 320 - -
Hepe03g1771 1053 Coils Coil 859 879 - -
Hepe03g1771 1053 Pfam RecF/RecN/SMC N terminal domain 25 993 IPR003395 -
Hepe03g1771 1053 Coils Coil 622 656 - -
Hepe03g1771 1053 Coils Coil 341 361 - -
Hepe03g1771 1053 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 1 1045 IPR027131 GO:0000724(InterPro)|GO:0000724(PANTHER)|GO:0003697(PANTHER)|GO:0005524(InterPro)|GO:0005634(PANTHER)|GO:0006281(InterPro)|GO:0016887(InterPro)|GO:0030915(InterPro)|GO:0030915(PANTHER)
Hepe03g1771 1053 Coils Coil 747 774 - -
Hepe03g1771 1053 Coils Coil 252 296 - -
Hepe03g1771 1053 Coils Coil 671 698 - -
Hepe03g1771 1053 Coils Coil 195 229 - -
Hepe03g1771 1053 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 25 996 IPR027417 -
Hepe03g1771 1053 Gene3D - 24 220 IPR027417 -
Hepe03g1771 1053 Gene3D - 847 1022 IPR027417 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g1771 Hepe-Chr3:74605876 Hepe07g0267 Hepe-Chr7:2675351 1.38e-16 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe03g1771 K22803 - csv:101210248 1909.03