Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe03g1780 ATGTTACCAGCTCTGATCACTGCGGCACGTGGGAATCTCTACGAATGGATTACCGACCTCCTCCGCCGTCACAAGGGGACGTTTCAGTTTCGAGGACCATGGTTTAGTAGCCTCAACTGCGTCGTCACCGCCGATCCTCGAAACTTGGAGCATCTTCTCAAGACCAAATTTCCCTCCTATCCTAAAGGGCCATTCTTTCGCGACACGGTGAGAGACCTTCTTGGGGACGGAATATTCGGCGCCGATGACGAGACGTGGCAGCGACAAAGGAAGGTGGCCAGCATCGAGTTTCACTCGGCGAGGTTCCGACAGATGACGGTGGAGTCGCTAGTGGAGCTCGTGCACTCGAGGCTTGAAGGGGTGTTGGAGGACTTCGCCGGACGGTCGGCGGCGGTGGACCTGCAGGATGTTCTTCTAAGGCTGACGTTTGACAATGTGTGTATGATCGCCTTTGGGGTGGATCCCGGCTGCTTGCGCAGCGGCTTGCCGGAGATTCCATTTGCTAAGGCCTTCGAGGATGCCACTGAAGTCACTGTTTTGCGCTTCATCACACCTACTTTAATATGGAAAATCATGAGATACCTGAACTTGGGAATGGAGAGGAAGCTGAAGCAATCAATAAAAGCCGTCGACGAATTTGCAGAGAACGTGATTCAAACACGGAAGAGAGAACTCTCAGCGGCGGCGCAACCGCAAGCCAATAACCAAAGATCCGACCTATTAACCGTATTCATGAGGCTAAGAGACGAGCAAGGGCGGCCGTTCTCCGACAAGTTCCTCAGAGATATCTGCGTCAATTTCATACTCGCCGGAAGAGACACATCTTCAGTAGCATTGAGTTGGTTCTTCTGGTTGCTCGATCAAAATCCCGATGTGGAAGACAAAATTCTAGCAGAAATTTGCAGAATCGTCGGCGAACGAGATGAAGCCAAAACCAGAGAGCTTCGGTTCGATTCGTTAGTGTTCAAACCAGAGGAAATCAAGAGAATGGAGTATTTGCACGCCGCGATTTCCGAAGCCCTAAGATTGTATCCATCAGTTCCCGTCGATCACAAGGAGGTAATTAATTTAATTGCTCATTCACATTCCAATTTCAAAAACAAATATCAGAGATCTAATCAAGAATCCGTTCGACTTAGGTCGGGGAGGACGATGTATTCCCAGACGGAACGATTCTGA 1179 50.04 MLPALITAARGNLYEWITDLLRRHKGTFQFRGPWFSSLNCVVTADPRNLEHLLKTKFPSYPKGPFFRDTVRDLLGDGIFGADDETWQRQRKVASIEFHSARFRQMTVESLVELVHSRLEGVLEDFAGRSAAVDLQDVLLRLTFDNVCMIAFGVDPGCLRSGLPEIPFAKAFEDATEVTVLRFITPTLIWKIMRYLNLGMERKLKQSIKAVDEFAENVIQTRKRELSAAAQPQANNQRSDLLTVFMRLRDEQGRPFSDKFLRDICVNFILAGRDTSSVALSWFFWLLDQNPDVEDKILAEICRIVGERDEAKTRELRFDSLVFKPEEIKRMEYLHAAISEALRLYPSVPVDHKEVINLIAHSHSNFKNKYQRSNQESVRLRSGRTMYSQTERF 392
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 74713231 74715400 + Hsped.03g17800.1 Hepe03g1780 566778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe03g1780 392 Gene3D Cytochrome P450 2 356 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe03g1780 392 SUPERFAMILY Cytochrome P450 8 349 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe03g1780 392 PRINTS P450 superfamily signature 335 346 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe03g1780 392 PRINTS P450 superfamily signature 270 287 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe03g1780 392 PRINTS E-class P450 group I signature 279 305 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe03g1780 392 PRINTS E-class P450 group I signature 259 276 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe03g1780 392 PRINTS E-class P450 group I signature 334 352 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe03g1780 392 PANTHER CYTOCHROME P450 9 355 - -
Hepe03g1780 392 Pfam Cytochrome P450 32 351 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g1780 Hepe-Chr3:74713231 Hepe10g1310 Hepe-Chr10:48957050 3.85e-82 dispersed
Hepe03g1780 Hepe-Chr3:74713231 Hepe06g1535 Hepe-Chr6:66054091 5.59e-100 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe03g1780 K15402 - csv:101212202 655.981