Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe03g1792 ATGGGATGCTTTGGTTGCTGTGGAGAGGATGCTATCCAGAAGGCTGCTGATAACAGCAGCATGTACCCAGTAAAATATTCAGCAGGAACTGATGAAAGCTATCACAAACGGCAAACTGCACCTAAGAGTCCTCCAATGGTGAAAATGCGGCCTATTGAAGTCCCTGCCATATCATTTCAAGAACTAAAGGAGGTTACTAAAAATTTTGATGCAGACTGTTTGATTGGAGAGGGTTCCTACGGTAGAGTATACTATGGGGTATTTACTAGTGGACAGGCTGTGGGAATCAAAAAGTTGGATGCCAGCAAACAGCCTGATGATGAATTCTTATCCCAGGTTTCCATGGTTTCAAGACTAAAGCACAATCATTTTCTAAATTTGATTGGGTACTGTGTTGATGGCAATTTTCGATGTCTTGCATATGAGTATGCTTCAAATGGATCTCTTCACGACATTTTACATGGGAGGAAAGGAGTCAAAGGAGCACAACCCGGCCCTGTTCTTTCGTGGACACAGAGAGTAAAAATTGCTGTAGGTGCTGCTAAGGGGTTGGAGTATTTGCATGAAAAGGCCGATCCTCATATCATCCATCGTGACATAAAATCTAGCAACGTATTAGTATTTGATGATGATTTGGCAAAAATTGCTGACTTTGATTTGTCAAACCAAGCCCCTGATATGGCTGCACGGCTTCATTCCACCCGTGTTCTTGGAACCTTCGGTTATCATGCTCCCGAATACGCAATGACTGGACAATTGAATGCAAAGAGTGATGTGTACAGCTTTGGTGTTGTCCTGCTTGAACTTTTGACAGGAAGAAAGCCAGTTGATCATACATTGCCTCGAGGACAGCAAAGCCTCGTGACATGGGCCACGCCTAAACTTTGCGAGGATAAAGTTAAGCAGTGTGTTGATGCAAAACTAGGAAATGAGTACCCTCCCAAGTCCGTTGCAAAGTTTGCAGCGGTTGCTGCATTGTGCGTTCAATATGAAGCAGATTTCAGGCCGAACATGAGTATCGTAGTCAAAGCTCTGCAACCTCTGTTAAATGCTCGACCTGGTCCCGGTGGTGAAACACCTACCCGGTAA 1089 44.26 MGCFGCCGEDAIQKAADNSSMYPVKYSAGTDESYHKRQTAPKSPPMVKMRPIEVPAISFQELKEVTKNFDADCLIGEGSYGRVYYGVFTSGQAVGIKKLDASKQPDDEFLSQVSMVSRLKHNHFLNLIGYCVDGNFRCLAYEYASNGSLHDILHGRKGVKGAQPGPVLSWTQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLVFDDDLAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLCEDKVKQCVDAKLGNEYPPKSVAKFAAVAALCVQYEADFRPNMSIVVKALQPLLNARPGPGGETPTR 362
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 74851882 74856981 - Hsped.03g17920.1 Hepe03g1792 566790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe03g1792 362 Pfam Protein tyrosine and serine/threonine kinase 74 345 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe03g1792 362 PIRSF ILK 9 352 - -
Hepe03g1792 362 Gene3D Transferase(Phosphotransferase) domain 1 144 353 - -
Hepe03g1792 362 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 3 351 IPR052101 -
Hepe03g1792 362 ProSiteProfiles Protein kinase domain profile. 69 349 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe03g1792 362 SMART serkin_6 69 349 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe03g1792 362 CDD STKc_IRAK 75 348 - -
Hepe03g1792 362 Gene3D Phosphorylase Kinase; domain 1 29 143 - -
Hepe03g1792 362 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe03g1792 362 FunFam pto-interacting protein 1 145 356 - -
Hepe03g1792 362 SUPERFAMILY Protein kinase-like (PK-like) 44 345 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g1792 Hepe-Chr3:74851882 Hepe05g1260 Hepe-Chr5:59780518 2.59e-171 dispersed
Hepe02g1183 Hepe-Chr2:14757526 Hepe03g1792 Hepe-Chr3:74851882 3.88e-210 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72684 PF07714 PK_Tyr_Ser-Thr 4.20E-44 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe03g1792 K13436 - csv:101215263 679.863