Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe03g1795 ATGGACGATAGCTGTGCTGTGTGTGCCGAAACTCTTGAATGGGTCGCCTATGGTTCTTGTGGCCATCGCGATGTCTGCTCCACCTGCGTTGCTCGTCTTCGATTCATTTGCGATGATCGCCACTGTTGCATCTGCAAGTCCGAATCCGCCGTCGTGTTTGTCACTAAGGCCTTAGGAGATTATACAAGGACGATTAGCGACTTCACAGTCTTTCCTTCTGAACCAAGGGAAGGCCGTAGTGGATCCTATTGGTATCATGAAGACACACAAACATTTTTTGATGATGTTGACCACTACAAGATGATAAAAGCAATGTGCAGGTTGACATGCAGTGAGTGTGATAAGATAGGTGAAGACCAACCAAATGATGGCTCAAAGCGCCGAGGAAGATTTCGGAACATTGACCAGCTAAAGGGTCATTTGTTTCATCAACATAAGCTGTTTATGTGCAGCCTTTGTTTGGAAGGAAGGAAGGTTTTTATTTGTGAACAAAAGCTATATAATAGAGCACAGTTGAAGCAGCATATACACACTGGTGACTCTGAGGTGGACGGAAGTGAGAGTGATAGAGGTGGTTTCGCCGGGCACCCTATGTGTGAATTTTGCAGAACTCCTTTTTACGGAGATAATGAGCTGTATACTCACATGTCAACTGAGCATTATACATGTCATATATGCCAAAGGCTCCATCCTGGACAGTATGAATACTATAAGAATTATGATGACCTAGAGATCCATTTCCGACAAGGGCATTTTCTTTGTGAAGATGAAGCCTGCCTTGCTAAAAAGTTTATAGTGTTCCAATCTGAAGCAGAAATGAAGAGGCATAATACTATTGAACATGGTGGCAAGCTATCTCGATCAAAGCGAAATGCTGCTTTGCAGATACCGACTAGTTTTCGATATCGAAGAAACGAGCAAGATAATCGCCGTGGTAGACGGACATTCCGTCGTGATTCTTCTGAAGATCTACTTTCTTTAGCCATACAAGCAAGTTTTGAAACAGCCAATGTTGATGAAACCAATCATGACCCATTGCCTAGCGGACAAGTAGCCTCAGATCAGGGAAATTTAAGCAATATTGATCCCTTAATGGAACCATTTGAATCATTAGCAATAACAGATCCTGAATCAGCTTCTAGATACCTTCAAGCCTTGGGCCATGCTAGGAATTCTCAATTGGAGCAATCATCCTTTCCACCCCTTTCAACAGCACCTGGCAGCAGCCATCCAAAGCCCGTGCATGACAAAGATGCTATAAATAATAACAGTATGGCAGCTCATCTTCGCCGCCAGAGGAAAGTGACTGTTCTGAATTCTGCTAAAGGTTGGCCAAAATCAAGTCGAGCTCCTGTGGCAAGTCGTGCCCCTGTGGCACCATCAAATAATTCTTCTCAAGCTTGGCCTGCAATAAATGTTAATCATGCAGCATCAAGCAGTTCTGGGCAGGCTAAGGGTGTTGTCACCATCAGTAATGGCCCTTCAGTCTCTGCTTACTCAAATGCTGCTCAGATGAAGGCTCGATCTAGTTCTTCAAGTGGATCAAGTAGTAGCAGTAGGATCGGCCACTCTGCTTCCGCTCCCAGTCTCACCGACATGGCCTATACTGAACCCTCAGTTAATGAATTCCCTCCAGTTTCTGCGGCACTGGCACGGAAGGTGCCCTCAAGTAGCCAGCGTTCAGTAAATGTGGAAGATGTCCAGATAGCAAACAAATCTCTAGTTGAAAAGATACGTGCTGCTCTTGATTTTGACCAAGATAGATATGCCATTTTTAAGGATATATCTGCACAATATCGTCTGGGTCAGATTGAAACGGAAATGTATCTAGACTGCGTGCAGCAGTTCGGTTTGTCACATCTTGTGATTGAGCTGGCTAGGCTCTGTCCTGATACTCGGAAACAGAAAGAACTGGTGGAGACCTATAATGCTAGTTTACATAAAGATGTGATCCAAGAAAATGGTAGGGCTCAAGGTAATATTCAATTTAAAGACAAAAGTAAAGGAAAGAAAGCTAAAGGGGGGAAGTCTATGGATGTTAAAGACAGCAGTTCCAAGGACAAATTAGCGGATAGTATCTTGAGTAGTGTCCGGGAACTGCAATCAAGTATCAGGCAATCGGAGGAAAATGTAGAGGTATTGTCAAAGGGTGAGTACCGTGCTGCGAAAGGGAAATCAAAGATATCATCTGACGACCAGCAAGGTGGAACAGGAGGCCAAAACAGTAAACCGTCTACTGGTCTATCAAACCAAAGCACTGGGGATGGGGGTGGGGGGAGCAAGCAGAAAAAGAAAACCTCGAAGTTTCATAGGGTTCGCTTAGGTGATGGTTCAGTTGCTGCACTTTTAGATTTAAAAAACTCCAATCCCGACCCGGACCCGGTAGAAAGAGTAGAGGACAGGAACAATGATGGGGCATTGCCTGTTCGTGGCGTCTGGCGAAATGGTGGTCAGAGGCTTTTCTCCTAG 2469 44.67 MDDSCAVCAETLEWVAYGSCGHRDVCSTCVARLRFICDDRHCCICKSESAVVFVTKALGDYTRTISDFTVFPSEPREGRSGSYWYHEDTQTFFDDVDHYKMIKAMCRLTCSECDKIGEDQPNDGSKRRGRFRNIDQLKGHLFHQHKLFMCSLCLEGRKVFICEQKLYNRAQLKQHIHTGDSEVDGSESDRGGFAGHPMCEFCRTPFYGDNELYTHMSTEHYTCHICQRLHPGQYEYYKNYDDLEIHFRQGHFLCEDEACLAKKFIVFQSEAEMKRHNTIEHGGKLSRSKRNAALQIPTSFRYRRNEQDNRRGRRTFRRDSSEDLLSLAIQASFETANVDETNHDPLPSGQVASDQGNLSNIDPLMEPFESLAITDPESASRYLQALGHARNSQLEQSSFPPLSTAPGSSHPKPVHDKDAINNNSMAAHLRRQRKVTVLNSAKGWPKSSRAPVASRAPVAPSNNSSQAWPAINVNHAASSSSGQAKGVVTISNGPSVSAYSNAAQMKARSSSSSGSSSSSRIGHSASAPSLTDMAYTEPSVNEFPPVSAALARKVPSSSQRSVNVEDVQIANKSLVEKIRAALDFDQDRYAIFKDISAQYRLGQIETEMYLDCVQQFGLSHLVIELARLCPDTRKQKELVETYNASLHKDVIQENGRAQGNIQFKDKSKGKKAKGGKSMDVKDSSSKDKLADSILSSVRELQSSIRQSEENVEVLSKGEYRAAKGKSKISSDDQQGGTGGQNSKPSTGLSNQSTGDGGGGSKQKKKTSKFHRVRLGDGSVAALLDLKNSNPDPDPVERVEDRNNDGALPVRGVWRNGGQRLFS 822
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 74892242 74897455 - Hsped.03g17950.1 Hepe03g1795 566793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe03g1795 822 MobiDBLite consensus disorder prediction 508 528 - -
Hepe03g1795 822 CDD RING-HC_ZNF598 3 53 IPR041888 -
Hepe03g1795 822 MobiDBLite consensus disorder prediction 336 355 - -
Hepe03g1795 822 ProSiteProfiles Zinc finger RING-type profile. 5 46 IPR001841 -
Hepe03g1795 822 MobiDBLite consensus disorder prediction 440 466 - -
Hepe03g1795 822 MobiDBLite consensus disorder prediction 728 760 - -
Hepe03g1795 822 MobiDBLite consensus disorder prediction 790 804 - -
Hepe03g1795 822 MobiDBLite consensus disorder prediction 391 419 - -
Hepe03g1795 822 PANTHER ZINC FINGER PROTEIN 598 1 817 IPR044288 GO:0016567(PANTHER)|GO:0043022(PANTHER)|GO:0061630(InterPro)|GO:0061630(PANTHER)|GO:0072344(PANTHER)|GO:0072344(InterPro)
Hepe03g1795 822 MobiDBLite consensus disorder prediction 720 822 - -
Hepe03g1795 822 MobiDBLite consensus disorder prediction 663 688 - -
Hepe03g1795 822 MobiDBLite consensus disorder prediction 657 688 - -
Hepe03g1795 822 MobiDBLite consensus disorder prediction 391 405 - -
Hepe03g1795 822 SMART c2h2final6 221 251 IPR013087 -
Hepe03g1795 822 SMART c2h2final6 197 220 IPR013087 -
Hepe03g1795 822 SMART c2h2final6 108 145 IPR013087 -
Hepe03g1795 822 SMART c2h2final6 252 281 IPR013087 -
Hepe03g1795 822 Coils Coil 697 717 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe03g1795 K22381 - csv:101214376 1362.05