Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe03g1809 ATGCCACGCGTCAACAGGAAAACGTTAACGTGTCTTCACAGGCAAGTCCCGATAACGGCGTTACGTGCTCCGTCTCCTTCCACCCGCGGCGGCTCCCTTATATATCCTCCTTCCTCGCCTACTCCGAAAGAAGAAGAAAAAATCTCCCAAATCCCGATTTCTACTTACCCTTCTTCTGATTATAGCGATTTTGATCTCTCTGTTGAAGAATCTGATTCTTTGTTAAATGTGAAAATGGTGGCTGAAGCTGAAGTTGTTGTTTGCTCCAAAACCCTCCCTGTTTTGGAGGTGCCGTATTTCGGTAAGGAAACTTGTCTTGTTGATGAAATTGAGTCCATCGATGGTGGGATTTCGATTGATCCGACTCTCGACCGTGTTCGCGCCTTCGAATCGGTCTGTTCCACCTCTCAATCGGATATTAAACCCATGAAGAAACTTCTGGATTCCGATGTAGATTCGTCGAACAGTAGGGAGTTTCCGAGCCTCCGGTCGGGGAGCTTTGCTGATATTGGACCTAGGAGGTACATGGAAGATGAACATATAAAGATAGATGATCTGTGTTCACATTTAGGGTCGCTCTTTAAGTTTCCCAACCCAAGTGCTTTCTATGGGGTGTTTGATGGACATGGAGGACCTGAAGCAGCAGCTTATATCAGAAAGAATGTTCTTAGACTCTTTTTTGAGGATGTTAGGTTTCCTCAAATGCCAGATGATGAAGTCTTGCCGGATGAGATCGAAAATTCCCTCCGAAAAGCATTTCTTCTGGCTGATCAAGCTCTGGCCGATGATCCCGGTGTCAGTAATTCGTCCGGGACGACGGCCCTGACTGCTCTTGTGCTTGGAAGGCTTTTAATGGTGGCGAATGTTGGAGATTGCCGGGCAGTTCTCAGTCGGAACGGAGAGGCGGTAGATATGTCTCAAGACCACCGGCCGATTTATTCTCCGGAGAAGCAACGGGTAGAAGAGTTGGGTGGCTATGTGGATGGTGGCTACCTCAACGGCGTTTTATCGGTTTCGAGGGCCTTGGGGGATTGGGACATGAAGCTACCCCATGGTTCTCCTTCACCTCTCATTGCAGAACCAGAATGCAGGCAGGTGGTTCTAACAGAGGAGGATGAGTTCTTGATCATAGCCTGCGACGGTATTTGGGACGTGATCTCAAGCCAGCAAGCAGTCAATGTAGTCCGACAGGGACTTCAACGACACGACGACCCTGAGCGATGCGCTCGAGATCTCGTCCTGCAGGCTTTGCGATTTGACTCATTCGATAATCTCACTGTTGTTGTTATTTGCTTCTCTAGTTTCCATCGCGACGGTTCCCCACTACCACAGCAGCGAAAATTGAGATACTGCAGTCTCTCTGCACAGGCTCTCTGTAGCTTGCAGAGATGGTTGGATAACAGTGGATGCCAATGA 1416 48.59 MPRVNRKTLTCLHRQVPITALRAPSPSTRGGSLIYPPSSPTPKEEEKISQIPISTYPSSDYSDFDLSVEESDSLLNVKMVAEAEVVVCSKTLPVLEVPYFGKETCLVDEIESIDGGISIDPTLDRVRAFESVCSTSQSDIKPMKKLLDSDVDSSNSREFPSLRSGSFADIGPRRYMEDEHIKIDDLCSHLGSLFKFPNPSAFYGVFDGHGGPEAAAYIRKNVLRLFFEDVRFPQMPDDEVLPDEIENSLRKAFLLADQALADDPGVSNSSGTTALTALVLGRLLMVANVGDCRAVLSRNGEAVDMSQDHRPIYSPEKQRVEELGGYVDGGYLNGVLSVSRALGDWDMKLPHGSPSPLIAEPECRQVVLTEEDEFLIIACDGIWDVISSQQAVNVVRQGLQRHDDPERCARDLVLQALRFDSFDNLTVVVICFSSFHRDGSPLPQQRKLRYCSLSAQALCSLQRWLDNSGCQ 471
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 75003845 75005805 - Hsped.03g18090.1 Hepe03g1809 566807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe03g1809 471 MobiDBLite consensus disorder prediction 22 51 - -
Hepe03g1809 471 FunFam Probable protein phosphatase 2C 22 148 435 - -
Hepe03g1809 471 SMART PP2C_SIG_2 178 432 IPR001932 -
Hepe03g1809 471 ProSitePatterns PPM-type phosphatase domain signature. 202 210 IPR000222 GO:0043169(InterPro)
Hepe03g1809 471 CDD PP2Cc 163 432 IPR001932 -
Hepe03g1809 471 Gene3D - 146 438 IPR036457 -
Hepe03g1809 471 SUPERFAMILY PP2C-like 157 434 IPR036457 -
Hepe03g1809 471 PANTHER PROTEIN PHOSPHATASE 2C 137 432 IPR015655 GO:0004722(InterPro)|GO:0006470(PANTHER)|GO:0006470(InterPro)
Hepe03g1809 471 ProSiteProfiles PPM-type phosphatase domain profile. 163 432 IPR001932 -
Hepe03g1809 471 SMART PP2C_4 153 430 IPR001932 -
Hepe03g1809 471 Pfam Protein phosphatase 2C 173 424 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g2353 Hepe-Chr1:88046733 Hepe03g1809 Hepe-Chr3:75003845 3.02e-106 dispersed
Hepe03g1669 Hepe-Chr3:73536757 Hepe03g1809 Hepe-Chr3:75003845 6.53e-20 dispersed
Hepe03g1809 Hepe-Chr3:75003845 Hepe08g2470 Hepe-Chr8:65762522 1.24e-84 dispersed
Hepe10g0050 Hepe-Chr10:463067 Hepe03g1809 Hepe-Chr3:75003845 3.98e-36 transposed
Hepe03g0022 Hepe-Chr3:251469 Hepe03g1809 Hepe-Chr3:75003845 2.61e-118 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe03g1809 K14803 - csv:101216626 706.442