Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe03g1913 ATGGCGAGCATCAAAGTTCACGGAAGCCCAGTTTCCACAGCCACAGCAAGAATTCTGGCTTGTATCTACGAGAAAGATCTGGATTATGAACTTGTTCTTGTCGACATGAAAAATAACGAGCACAAGAAACAACCTTTCCTCTCCATCAACCCGTTTGGTCAAGTTCCTGGGTTTCAAGATGGGGATCTCACCCTTTTCGAATCAAGGGCCATTACTCAATACCTTGCCTGCGCCTACGCCAGCAAGGGAACCCAATTGATCTCGGACGACCCAAAGAAAGCAGCGATCATATCTACGTGGGTCGAAGTGGAGGGCCACCACTACGATCCACCGGCGGTGGCGCTGACCTACGAGCATCTTGTCAAGCCAATATACGGGCTCGGTGTAACCGATCCGGCGGTGGTGGCGGAGAACGAAGCGAAGCTGGAGAAAGTTCTTGACATCTATGAGAAACAGCTGACCAAAACCAAATTCTTGGCTGGCAATGAGTTCAGTCTGGCGGATTTGCACCACATCCCCAATGTCAGCTACTTGTTGGCGACGCCGTCGAAGAAGCTGTACGAGTCGCGTCCGCACGTTAGCGCTTGGGCGGCTGAGATCACTGCAAGGCCTTCCTGGGGTAAGGTTGTTACCTTGCGCAATCCAAAGTGA 651 51.77 MASIKVHGSPVSTATARILACIYEKDLDYELVLVDMKNNEHKKQPFLSINPFGQVPGFQDGDLTLFESRAITQYLACAYASKGTQLISDDPKKAAIISTWVEVEGHHYDPPAVALTYEHLVKPIYGLGVTDPAVVAENEAKLEKVLDIYEKQLTKTKFLAGNEFSLADLHHIPNVSYLLATPSKKLYESRPHVSAWAAEITARPSWGKVVTLRNPK 216
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 76180814 76183264 - Hsped.03g19130.1 Hepe03g1913 566911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe03g1913 216 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 216 IPR010987 -
Hepe03g1913 216 CDD GST_C_Phi 92 210 IPR034347 -
Hepe03g1913 216 Gene3D Glutaredoxin 2 87 - -
Hepe03g1913 216 SUPERFAMILY GST C-terminal domain-like 85 208 IPR036282 -
Hepe03g1913 216 PANTHER GLUTATHIONE S-TRANSFERASE RHO 1 213 - GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)|GO:0043295(PANTHER)
Hepe03g1913 216 FunFam Glutathione S-transferase F2 3 87 - -
Hepe03g1913 216 SFLD Glutathione Transferase (cytosolic) 1 211 IPR040079 -
Hepe03g1913 216 SFLD Main.5: Phi-like 1 211 - -
Hepe03g1913 216 SUPERFAMILY Thioredoxin-like 1 82 IPR036249 -
Hepe03g1913 216 CDD GST_N_Phi 4 76 - -
Hepe03g1913 216 Pfam Glutathione S-transferase, C-terminal domain 130 204 IPR004046 -
Hepe03g1913 216 Gene3D - 90 214 - -
Hepe03g1913 216 Pfam Glutathione S-transferase, N-terminal domain 5 76 IPR004045 -
Hepe03g1913 216 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 83 IPR004045 -
Hepe03g1913 216 FunFam Glutathione S-transferase F2 88 210 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g1913 Hepe-Chr3:76180814 Hepe10g0172 Hepe-Chr10:1745951 7.79e-60 dispersed
Hepe03g1912 Hepe-Chr3:76171512 Hepe03g1913 Hepe-Chr3:76180814 2.42e-110 tandem
Hepe03g1913 Hepe-Chr3:76180814 Hepe03g1914 Hepe-Chr3:76190410 1.26e-43 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe03g1913 K00799 - csv:101212771 375.17