Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe03g1914 ATGGAGAGGGGAACCGTTTCCTATGAAGGGTTTCTAACCAATGAATGCAAAAGATTCAAAATACTTTTACAGTCTCCTTATAACTCTAACAGTACTCCCTTTGGCCAGATTCCAGCCCTAGAAGATGGTGATCTCACCCTATTTGAATCAAGAGCAATCACATCCTACATCGCCAACAAGCACAACCAAACCGGCCAGGATCTCCTCCTGCATCACCAAACCCCCAAAGAATCCGCCATTGTGAAGCTGTGGCTAGAAGTAGAGTCCCACCATTACAGCCCTGCAATCACTCCCATCATCCACCAATTCTTCACCGCCCACCTTCAGGGTCACGACCTCGACCGCGCTCTCATCGACCAGAACTTGAAGCGTCTAGGCGCCGTTTTAGACGTCTACGAGCAGCGCCTAGGCGCCAACAAGTACCTGGCCGGCCATTGCTACACATTGGCTGATCTCCACCATCTTCCTTACACTTTCTACTTGATGAAGACGCCGTGGGCCTCCCTGGTTAATGATCGGCCGAATGTTAAGGCTTGGTGGGATGATATTTCCGCTCGGCCCGCGTTTCTTAAGGATTTGAATCGAAATTTAATTGAGAGCCTTGGCTGA 609 49.75 MERGTVSYEGFLTNECKRFKILLQSPYNSNSTPFGQIPALEDGDLTLFESRAITSYIANKHNQTGQDLLLHHQTPKESAIVKLWLEVESHHYSPAITPIIHQFFTAHLQGHDLDRALIDQNLKRLGAVLDVYEQRLGANKYLAGHCYTLADLHHLPYTFYLMKTPWASLVNDRPNVKAWWDDISARPAFLKDLNRNLIESLG 202
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 76190410 76193975 - Hsped.03g19140.1 Hepe03g1914 566912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe03g1914 202 Gene3D - 71 191 - -
Hepe03g1914 202 SFLD Glutathione Transferase (cytosolic) 31 186 IPR040079 -
Hepe03g1914 202 PANTHER GLUTATHIONE S-TRANSFERASE RHO 33 191 - GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)|GO:0043295(PANTHER)
Hepe03g1914 202 Pfam Glutathione S-transferase, N-terminal domain 31 59 IPR004045 -
Hepe03g1914 202 FunFam Glutathione S-transferase F2 72 193 - -
Hepe03g1914 202 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 74 202 IPR010987 -
Hepe03g1914 202 Pfam Glutathione S-transferase, C-terminal domain 102 187 IPR004046 -
Hepe03g1914 202 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 65 IPR004045 -
Hepe03g1914 202 Gene3D Glutaredoxin 13 64 - -
Hepe03g1914 202 SFLD Main (cytGST) 31 186 - -
Hepe03g1914 202 SUPERFAMILY Thioredoxin-like 6 62 IPR036249 -
Hepe03g1914 202 CDD GST_C_Phi 76 191 IPR034347 -
Hepe03g1914 202 SUPERFAMILY GST C-terminal domain-like 56 192 IPR036282 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g1912 Hepe-Chr3:76171512 Hepe03g1914 Hepe-Chr3:76190410 3.69e-45 dispersed
Hepe03g1914 Hepe-Chr3:76190410 Hepe10g0172 Hepe-Chr10:1745951 2.22e-32 dispersed
Hepe03g1913 Hepe-Chr3:76180814 Hepe03g1914 Hepe-Chr3:76190410 1.26e-43 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe03g1914 K00799 - vvi:100247639 229.95