Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe03g1916 ATGAGAAGAAAATCCAAAACCCTAAGAACGACGATGACGACAACGAGGAAGAAGATGAAAGCGACATTAACGAGGCATTTGCAGGTTCAGTTAGGGCAAGTTTCTCTCGCTCCTCTCCACCGCCACCGCTCCTCTTCCGCCGCCTCTTCCACCGCCGCTTGCTTCCAGAGCTTGCCTCAATCTGAACCACCGGCGACCGTCAACGCTTCCGATTCTCTCCTCCCTTCCTCGTCTCCTAAATTTGAGGACAGAGATTTCATTCTTAGCCAGGACTTCTTCTGCACCCCCGACTATATCACCCCGGACAATCAAAATCTGTTGAATGGTGTGGATTGCAACAAGGAAAGCACTCCTTGCCCCAAATCACCAGAGAAGATTAATACTATTAAAACTAAGAGAAAAATACACGATGGTGTTTTAGTAAATCCTTTGAGTCCAAGTTTGTCTGGCCGCGAACAAGTTGTGGAGCTTGGAAATGACATTTTTGGAACAGATGACGTGGATATGGATAAAGAGACAACAACAATGCCAAAGAAACAAAACTATGTTTCTCAATCTGCAGTGGCTCTACGTTGTCGAGTTATGCCACCTCCTTGCATGAAGAACCCATACTTGAAAGATGCTTCGGACGTGGGTGTAGACCCATTTGGTAATCAACGAATGAAATGTGCAGGATTTTTTCCTGCGTTGTTTAGTGGAGATGGTCTTTCAAGATATCACACCGATTTTCATGAGATTAAGCAAATAGGGACTGGAAATTTTAGCCGTGTATTCAAGGTATTTAAGAGAATTGATGGTTGCTTATATGCTGTCAAACAAAGCACAAGACCATTGCATCAAGACATAGAAAGGAGGAGGGCTTTGATGGAAGTTCAAGCTTTGGCAGCTTTAGGATCTCATGAAAACATTGTTGGATACAACTCTTCGTGGTTTGAAAATGAGCAACTCTACATTCAAATGGAACTCTGTGATTGTAGTTTATCCATTGGCAGGTATTCTCATCCATTCTCTGAGGCAGATGCGCTTAGAGCCTTGTATCAGATTGCAAAAGCATTGCTGTTTGTGCACGAGAAAGGAGTAGCTCATTTAGATGTGAAACCTGACAATATTTATGTCAAAGATGGTGTCTATAAACTTGGTGATTTTGGGTGTGCTACCCTTCTTGATAAAAGCCTACCAATTGAGGAGGGTGATGCACGCTATATGCCTCAAGAAATTCTGAATGAGAGATACGATCATCTTGACAAGGTTGATATTTTCTCCTTGGGAGTTTCTATTTATGAGATTGTGAGAGGATCGACATTGCCAGAAGCACATTTCATGATTCTTAAGGAGGGAAAATTGCCACTCCTCCCTGGTCATTCATTGCAGTTTCAAAACTTAATCAAGGTAATGGTGGATCCCGACCCGGCACGACGTCCTTTCGCAAGGGAAATTCTTGAGAATCCCATATTTGATAAGGTCAGACATCATCTGAAATCGTAG 1485 42.96 MRRKSKTLRTTMTTTRKKMKATLTRHLQVQLGQVSLAPLHRHRSSSAASSTAACFQSLPQSEPPATVNASDSLLPSSSPKFEDRDFILSQDFFCTPDYITPDNQNLLNGVDCNKESTPCPKSPEKINTIKTKRKIHDGVLVNPLSPSLSGREQVVELGNDIFGTDDVDMDKETTTMPKKQNYVSQSAVALRCRVMPPPCMKNPYLKDASDVGVDPFGNQRMKCAGFFPALFSGDGLSRYHTDFHEIKQIGTGNFSRVFKVFKRIDGCLYAVKQSTRPLHQDIERRRALMEVQALAALGSHENIVGYNSSWFENEQLYIQMELCDCSLSIGRYSHPFSEADALRALYQIAKALLFVHEKGVAHLDVKPDNIYVKDGVYKLGDFGCATLLDKSLPIEEGDARYMPQEILNERYDHLDKVDIFSLGVSIYEIVRGSTLPEAHFMILKEGKLPLLPGHSLQFQNLIKVMVDPDPARRPFAREILENPIFDKVRHHLKS 494
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 76208939 76215113 + Hsped.03g19160.1 Hepe03g1916 566914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe03g1916 494 Pfam Protein kinase domain 243 485 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe03g1916 494 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 46 481 IPR050339 GO:0004672(PANTHER)|GO:0004713(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)
Hepe03g1916 494 ProSitePatterns Protein kinases ATP-binding region signature. 249 272 IPR017441 GO:0005524(InterPro)
Hepe03g1916 494 Gene3D Transferase(Phosphotransferase) domain 1 323 489 - -
Hepe03g1916 494 SMART serkin_6 243 485 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe03g1916 494 MobiDBLite consensus disorder prediction 48 76 - -
Hepe03g1916 494 ProSiteProfiles Protein kinase domain profile. 243 485 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe03g1916 494 FunFam WEE protein kinase 233 321 - -
Hepe03g1916 494 Gene3D Phosphorylase Kinase; domain 1 233 322 - -
Hepe03g1916 494 ProSitePatterns Serine/Threonine protein kinases active-site signature. 360 372 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe03g1916 494 SUPERFAMILY Protein kinase-like (PK-like) 236 489 IPR011009 -
Hepe03g1916 494 FunFam Wee1-like protein kinase 322 489 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g1916 Hepe-Chr3:76208939 Hepe02g1189 Hepe-Chr2:14944239 4.78e-15 dispersed
Hepe03g1916 Hepe-Chr3:76208939 Hepe03g0239 Hepe-Chr3:3044734 3.42e-14 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72686 PF00069 Pkinase 3.40E-46 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe03g1916 K06632 - csv:101213255 848.58