Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe03g1940 | ATGGATTCATATTTAGGAAAATCTGTGATGAAGTTGGCTTTGAATTCAGACCCTGAAGAACATCGTGTCGCATTGTTTGTGTTACTTCTCTGTGCTTGTATTGTAATTGGCCATCTTCTTGAGAAAAATCGTTGGATAAATGAATCAGTTACTGCCATTTTCATTGGTCTTTTCACTGGAACTGTCATCTTATTAACAACCAAAGGCAGAAACTCGCGTATCCTAGTGTTTAGTGAAGATCTTTTCTTCAATTATGTTCTTCCACCTATAATTTTTAATGCCGGGTTTCAGGTGAAAAAGAAACAGTTCTTTCGTAATTTTCTAATGATCATGTTGTTTGGGGCTGTTGGTACTGTGATCTCATTTTTCATCATATCACTAGGTTCGCTCCATTTATTCAAGAAATTGGATATTGGCTTCTTAGACGTGGGTGATTATTTTGCCCTTGGAGCAATCTTAACAGCCACAGATAGCGTTTGCACCTTGCAGGTGCTTAATCAGGATGAGACTCCTTTACTGTATAGTCTAGTCTTTGGTGAAGGTGTGGTTAATGATGCTACCTCTGTAGTACTTTTCAAAGCAATCCAGAGATTTGACCTCTCTCACATCACCTCAGCCAATGGCTTTCAGCTTCTGGGAAATTTTTTCTATTTATTTTGTATGAGCACCTTGCTGGGAGTAATAGTTGGGCTGTCCAGTGCATACATCATAAAGAAACTGTACTTTGGCAGGCACTCAACTGATCGGGAGGTTGCTTTGATGATTTTAATGCCTTACCTTTCATATATGACTGCGGAATTTTGCAATCTTAGTGGTATTCTTACCATGTTCTTTTGTGGGATTGTCATGTCTCATTACACTTGGCATAACGTGACTGAAAGTTCAAGAGTGACCACCAAGCATACTTTTGCAACATTCTCATTTGTTTCAGAGATTTTCATCTTCTTATATGTCGGTATGGATGCCTTGGATATTGAGAAGTGGAAAGTTGTTAGCCAAAGGCCCTGGACATCGGCTGGAGTGAGTCTGATACTGCTAGGTTTAGTCCTTGTTGCGAGAGCAGCTTTTGTATTTCCACTCTCTTTTATATCTAACTTGACTAGAAGGTCTCAGAATGACAAAATTGGGTTTAAGCAGCAGTTTACAATTTGGTGGGCTGGACTCATGAGAGGTGCTGTATCAGTGGCACTTGCTTATAATCAGTTTACAAGGTCAGGGCACACGCAACTGCAAGGGAATGCGATCATGATTACTAGCACAATCACAATTGTTCTCTTTACTAATGTGGTATTTGGACTATTAACTAAGCCTATTGTAAGGTACATGCTTTCACTGCCTAATAGACAAATAGACGGCACAAATTTAGCAGATTCTCCATTTAAGTCGCTGAATGAGCCTTTTTTGCTCGGTGGCGAAGATGTCGAATCCGATGTTGGAGGATCGAACATTCCCCGTCCTACCAGCTTACGAATGCTGTGGACAACTCCAACTCGTTCTGTCCATTACTATTGGCGAATGTTCGATGATCGATACATGCGTCCCGTTTTTGGTGGAAGAGGTTTTGTACCTTTTATCCCTGGTTCACCAACTGAAAAGTATATCCACTGA | 1608 | 40.36 | MDSYLGKSVMKLALNSDPEEHRVALFVLLLCACIVIGHLLEKNRWINESVTAIFIGLFTGTVILLTTKGRNSRILVFSEDLFFNYVLPPIIFNAGFQVKKKQFFRNFLMIMLFGAVGTVISFFIISLGSLHLFKKLDIGFLDVGDYFALGAILTATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFKAIQRFDLSHITSANGFQLLGNFFYLFCMSTLLGVIVGLSSAYIIKKLYFGRHSTDREVALMILMPYLSYMTAEFCNLSGILTMFFCGIVMSHYTWHNVTESSRVTTKHTFATFSFVSEIFIFLYVGMDALDIEKWKVVSQRPWTSAGVSLILLGLVLVARAAFVFPLSFISNLTRRSQNDKIGFKQQFTIWWAGLMRGAVSVALAYNQFTRSGHTQLQGNAIMITSTITIVLFTNVVFGLLTKPIVRYMLSLPNRQIDGTNLADSPFKSLNEPFLLGGEDVESDVGGSNIPRPTSLRMLWTTPTRSVHYYWRMFDDRYMRPVFGGRGFVPFIPGSPTEKYIH | 535 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 76547620 | 76555538 | + | Hsped.03g19400.1 | Hepe03g1940 | 566938 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe03g1940 | 535 | Gene3D | - | 143 | 194 | - | - | |
| Hepe03g1940 | 535 | NCBIfam | sodium/hydrogen exchanger 3 | 22 | 453 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Hepe03g1940 | 535 | PRINTS | Na+/H+ exchanger signature | 150 | 160 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Hepe03g1940 | 535 | PRINTS | Na+/H+ exchanger signature | 81 | 92 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Hepe03g1940 | 535 | PRINTS | Na+/H+ exchanger signature | 95 | 109 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Hepe03g1940 | 535 | PRINTS | Na+/H+ exchanger signature | 110 | 118 | IPR004709 | GO:0006814(InterPro)|GO:0006885(InterPro)|GO:0015385(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Hepe03g1940 | 535 | Pfam | Sodium/hydrogen exchanger family | 32 | 440 | IPR006153 | GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro) | |
| Hepe03g1940 | 535 | PANTHER | SODIUM/HYDROGEN EXCHANGER | 14 | 525 | IPR018422 | GO:0005886(PANTHER)|GO:0006812(InterPro)|GO:0015385(PANTHER)|GO:0015385(InterPro)|GO:0015386(PANTHER)|GO:0016020(InterPro)|GO:0051453(PANTHER)|GO:0071805(PANTHER)|GO:0098719(PANTHER)|GO:1902600(InterPro) | |
| Hepe03g1940 | 535 | ProSiteProfiles | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 33 | - | - | |
| Hepe03g1940 | 535 | ProSiteProfiles | cAMP/cGMP binding motif profile. | 121 | 158 | IPR000595 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe03g1940 | Hepe-Chr3:76547620 | Hepe09g1607 | Hepe-Chr9:46355457 | 5.08e-256 | dispersed | |
| Hepe03g0130 | Hepe-Chr3:1569976 | Hepe03g1940 | Hepe-Chr3:76547620 | 2.17e-249 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe03g1940 | - | - | - | 0.0 |