Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe03g2024 ATGGATTTAATAAATGGGGGCGAGCCCGGCTACGCTCCGGTAGATAAGGATTCTGGTAAGTCTAGTAATCTTCGAGAGAAGGATTTGGGTTCTAAATTGGAGACAGGAAGCAAAAGCAGTAAGGATATGGTTTTTCGAGCTGATAAGATTGATTTCAAGAATTGGGATATTCAGCTGGACAGGCACGTGAGCAGGGCTTGGTCAAGGGACAGGGAAGTGCCTGCCAAAAGGGAAGAATGGGAGATTGATTTGTCTAAACTTGATATCAGATATGTGAAAGCTCATGGAACTTATGGTACTATTTACAGAGGAAATTATGATGGCAATGATGTTGCAGTGAAAGTGCTTGATTGGGGGGACGATGGTGTTTCCTCAGTTGCTGAAATTGCTTCTCTTCGAACATCTTTTCGCCAGGAAGTTGCTGTTTGGCATAAGCTTGACCATCCCAATGTTGCAAAGTTTTTTGGAGCATCAATGGGGACGTCCAACCTTAAAATCCCTCCCCAAAACTCGTTAATTGATAGTAACCAATCTTTTCCTTCAAGGGCATGCTGCGTTGTTGTTGAGTATCTTCCAGGTGGAACACTAAAGAGTTTTTTAATCAAAAGTAGGAAAAAGAAACTTGCATTTAAAGTTGTGATTCAACTTGCTTTGGATCTTTCTAGAGGCTTGAGTTATTTACACTCCAAAAAGATTGTACACCGTGATATTAAAACAGAGAATGTGCTCCTAGATGCTCAGAAGACTCTAAAAATTGTTGATTTTGGCGTTGCTCGAGTCGAAGCACAAAACCCGAGGGATATGACCGGAGAGACTGGCACCCTTGGTTACATGGCCCCCGAGGTCCTTGATGGTAAGCCTTATAATAGAAAATGTGATGTCTACAGTTTTGGCATATGTTTATGGGAAACATACTGTTGTGATATGCCTTACCCAGATCTAAGTTTTGCTGAAGTGTCATCTGCAGTTGTGCGACAGGTATATTTATTTCATTCGGTACACAATTATTTAGTTTTCTTTAAAGCTTTGTGA 1032 41.09 MDLINGGEPGYAPVDKDSGKSSNLREKDLGSKLETGSKSSKDMVFRADKIDFKNWDIQLDRHVSRAWSRDREVPAKREEWEIDLSKLDIRYVKAHGTYGTIYRGNYDGNDVAVKVLDWGDDGVSSVAEIASLRTSFRQEVAVWHKLDHPNVAKFFGASMGTSNLKIPPQNSLIDSNQSFPSRACCVVVEYLPGGTLKSFLIKSRKKKLAFKVVIQLALDLSRGLSYLHSKKIVHRDIKTENVLLDAQKTLKIVDFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWETYCCDMPYPDLSFAEVSSAVVRQVYLFHSVHNYLVFFKAL 343
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 77558104 77562390 - Hsped.03g20240.1 Hepe03g2024 567022
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe03g2024 343 MobiDBLite consensus disorder prediction 19 38 - -
Hepe03g2024 343 SUPERFAMILY Protein kinase-like (PK-like) 74 332 IPR011009 -
Hepe03g2024 343 ProSitePatterns Serine/Threonine protein kinases active-site signature. 232 244 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe03g2024 343 Gene3D Transferase(Phosphotransferase) domain 1 171 337 - -
Hepe03g2024 343 Pfam Protein kinase domain 95 328 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe03g2024 343 MobiDBLite consensus disorder prediction 1 38 - -
Hepe03g2024 343 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 59 326 IPR051681 GO:0004674(PANTHER)|GO:0005886(PANTHER)
Hepe03g2024 343 SMART serkin_6 87 337 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe03g2024 343 Gene3D Phosphorylase Kinase; domain 1 75 168 - -
Hepe03g2024 343 FunFam Kinase suppressor of Ras 1 76 170 - -
Hepe03g2024 343 ProSiteProfiles Protein kinase domain profile. 87 343 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe03g2024 343 CDD STKc_MAP3K-like 94 326 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g2024 Hepe-Chr3:77558104 Hepe09g0193 Hepe-Chr9:1528848 2.58e-141 dispersed
Hepe03g2024 Hepe-Chr3:77558104 Hepe05g1576 Hepe-Chr5:65319680 7.37e-170 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72688 PF07714 PK_Tyr_Ser-Thr 2.10E-44 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe03g2024 - - - 0.0