Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe03g2024 | ATGGATTTAATAAATGGGGGCGAGCCCGGCTACGCTCCGGTAGATAAGGATTCTGGTAAGTCTAGTAATCTTCGAGAGAAGGATTTGGGTTCTAAATTGGAGACAGGAAGCAAAAGCAGTAAGGATATGGTTTTTCGAGCTGATAAGATTGATTTCAAGAATTGGGATATTCAGCTGGACAGGCACGTGAGCAGGGCTTGGTCAAGGGACAGGGAAGTGCCTGCCAAAAGGGAAGAATGGGAGATTGATTTGTCTAAACTTGATATCAGATATGTGAAAGCTCATGGAACTTATGGTACTATTTACAGAGGAAATTATGATGGCAATGATGTTGCAGTGAAAGTGCTTGATTGGGGGGACGATGGTGTTTCCTCAGTTGCTGAAATTGCTTCTCTTCGAACATCTTTTCGCCAGGAAGTTGCTGTTTGGCATAAGCTTGACCATCCCAATGTTGCAAAGTTTTTTGGAGCATCAATGGGGACGTCCAACCTTAAAATCCCTCCCCAAAACTCGTTAATTGATAGTAACCAATCTTTTCCTTCAAGGGCATGCTGCGTTGTTGTTGAGTATCTTCCAGGTGGAACACTAAAGAGTTTTTTAATCAAAAGTAGGAAAAAGAAACTTGCATTTAAAGTTGTGATTCAACTTGCTTTGGATCTTTCTAGAGGCTTGAGTTATTTACACTCCAAAAAGATTGTACACCGTGATATTAAAACAGAGAATGTGCTCCTAGATGCTCAGAAGACTCTAAAAATTGTTGATTTTGGCGTTGCTCGAGTCGAAGCACAAAACCCGAGGGATATGACCGGAGAGACTGGCACCCTTGGTTACATGGCCCCCGAGGTCCTTGATGGTAAGCCTTATAATAGAAAATGTGATGTCTACAGTTTTGGCATATGTTTATGGGAAACATACTGTTGTGATATGCCTTACCCAGATCTAAGTTTTGCTGAAGTGTCATCTGCAGTTGTGCGACAGGTATATTTATTTCATTCGGTACACAATTATTTAGTTTTCTTTAAAGCTTTGTGA | 1032 | 41.09 | MDLINGGEPGYAPVDKDSGKSSNLREKDLGSKLETGSKSSKDMVFRADKIDFKNWDIQLDRHVSRAWSRDREVPAKREEWEIDLSKLDIRYVKAHGTYGTIYRGNYDGNDVAVKVLDWGDDGVSSVAEIASLRTSFRQEVAVWHKLDHPNVAKFFGASMGTSNLKIPPQNSLIDSNQSFPSRACCVVVEYLPGGTLKSFLIKSRKKKLAFKVVIQLALDLSRGLSYLHSKKIVHRDIKTENVLLDAQKTLKIVDFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWETYCCDMPYPDLSFAEVSSAVVRQVYLFHSVHNYLVFFKAL | 343 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 77558104 | 77562390 | - | Hsped.03g20240.1 | Hepe03g2024 | 567022 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe03g2024 | 343 | MobiDBLite | consensus disorder prediction | 19 | 38 | - | - | |
Hepe03g2024 | 343 | SUPERFAMILY | Protein kinase-like (PK-like) | 74 | 332 | IPR011009 | - | |
Hepe03g2024 | 343 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 232 | 244 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe03g2024 | 343 | Gene3D | Transferase(Phosphotransferase) domain 1 | 171 | 337 | - | - | |
Hepe03g2024 | 343 | Pfam | Protein kinase domain | 95 | 328 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe03g2024 | 343 | MobiDBLite | consensus disorder prediction | 1 | 38 | - | - | |
Hepe03g2024 | 343 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 59 | 326 | IPR051681 | GO:0004674(PANTHER)|GO:0005886(PANTHER) | |
Hepe03g2024 | 343 | SMART | serkin_6 | 87 | 337 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe03g2024 | 343 | Gene3D | Phosphorylase Kinase; domain 1 | 75 | 168 | - | - | |
Hepe03g2024 | 343 | FunFam | Kinase suppressor of Ras 1 | 76 | 170 | - | - | |
Hepe03g2024 | 343 | ProSiteProfiles | Protein kinase domain profile. | 87 | 343 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe03g2024 | 343 | CDD | STKc_MAP3K-like | 94 | 326 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe03g2024 | Hepe-Chr3:77558104 | Hepe09g0193 | Hepe-Chr9:1528848 | 2.58e-141 | dispersed | |
Hepe03g2024 | Hepe-Chr3:77558104 | Hepe05g1576 | Hepe-Chr5:65319680 | 7.37e-170 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
72688 | PF07714 | PK_Tyr_Ser-Thr | 2.10E-44 | CL0016 | Hepe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe03g2024 | - | - | - | 0.0 |