Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe03g2029 ATGGGTAACGCCGACTACGTGTATCCATCGACGGCGGCGGCGGGGGGAGGCGGCGAGTGTTTACACAGAGCGGCAATTCCGCCGGCGCAGCCGTTCGTGAAGTCGGTGAAGAACTCTCTGAAGGAGACGTTCTTCCCGGACGACCCGCTCCGGCAGTTCAAGAACCAGCCGGCGGGGAGAAGGGTTATTCTGGGGTTGCAGTACTTTTTTCCGGTGGTGGAATGGGGACCTCGGTATAATCTCGGGCTTCTGAAATCGGATCTTATCTCGGGTATCACCATTGCTAGTCTCGCCATTCCTCAGGGGATTAGCTATGCTAAGCTCGCTAACTTGCCCCCTATCCTCGGCCTCTATTCAAGTTTTATTCCGCCGTTGATTTATGCGATGATGGGAAGCTCGAAGGACTTGGCGGTCGGAACGGTGGCGGTAGCATCGCTTCTGATCAGCTCAATGTTAGGAGCAGAGGTTAATCCTGTCCAAAATCCCACTCTTTATCTCCACCTTGCTTTCACCGCCACCTTCTTCGCCGGAGTCTTCCAAGCTTCTTTAGGCCTCTTAAGGTTAGGGTTCATCGTGGATTTTTTGTCACATGCAACTATAGTTGGGTTCATGGCCGGCGCCGCAACGGTGGTGTGCCTTCAACAACTCAAAGGCATTTTGGGTCTAACCCATTTCACTCACGCTACTGACCTTGTCTCCGTCCTTCGTTCGGTCTTCACCCAAGTTAATCAGTGGAGATGGGAAAGTGGGGTTTTGGGGTGCGGTTTTCTCTTCTTCCTCCTCGTCACGAGATACTTTAGCAAGAAAAAGCCAAAGTTCTTTTGGATATCGGCAATGGCACCTTTGACCTCAGTGATTTTGGGAAGTCTTCTCGTGTTTCTCACTCATGCAGAAAAACACGGCGTTGAAGTGATTGGAGAATTGAAGAAAGGGCTAAATCCAGTGTCGATTACAGATTTGGTGATGGTGTCGCCTTATCTTTCCGTTGCTATTAAAACTGGCATCATCACTGGGGTCATTGCTCTCGCGGAAGGAATAGCAGTTGGAAGAAGCTTTGCGATGTTCAAACATTACAACATCGATGGCAACAAGGAAATGGTAGCCATTGGCACCATGAACATGGTCGGCTCTTGCTTCTCTTGCTATCTCACCACAGGCCCATTTTCCCGATCGGCTGTGAACTACAACGCAGGATGCAAAACTGCGGTTTCGAATGTGATAATGGCGATTGCAGTGATGTTGACGCTCCTGTTCTTGACTCCCCTGTTCCACTACACTCCTCTCGTCGTGCTTTCCTCCATCATCATTTCCGCCATGCTTGGCCTCATCGATTACGAGGCTGCCATTCACTTGTGGAAGGTCGATAAGTTCGATTTCCTCGTCTGCATTGGCGCTTATGCTGGCGTCGTCTTTGCTAGTGTTGAAATTGGCTTGGTCATTGCGGTTGCAATATCTGTGCTCAGACTACTTTTGTTCGTTGCAAGGCCGAGGACGCTCGTGCTCGGAAACCTTCCCAATTCCACAGTTTACAGGAACGTCGAGCAATACCCGAATGCTGATAATGTTCCCGGCATTCTCATACTTCAGATTGATGCTCCCATTTACTTTGCAAATTCCAGCTACTTGAGAGAAAGGATTATAAGGTGGGTTGACGAAGAGGAAGACAGGATAAAGGCTTCAGGAGAAAGCACCTTACAATATGTCGTTTTGGACATGAGTGCTGTTGGAAACATTGACACGAGTGGAATAAGCATGTTTGAAGAGATCAGGAAGATTTTAGACAGAAGGGGATTGAAGTTAGTTTTGGCCAACCCTGGAGCTGAGGTGATGAAGAAGCTAGACAAGGGCAAGTTCATCGAGAGCCTCGGACACGAATGGATCTATCTTACGGTGGCGGAAGCCGTAGCAGCCTGCAACTATATGCTTCACTCTTGCAAACCAAACCCTGATGAGAAAGCAGAGCCATGGAACAATGTGTAA 1980 49.24 MGNADYVYPSTAAAGGGGECLHRAAIPPAQPFVKSVKNSLKETFFPDDPLRQFKNQPAGRRVILGLQYFFPVVEWGPRYNLGLLKSDLISGITIASLAIPQGISYAKLANLPPILGLYSSFIPPLIYAMMGSSKDLAVGTVAVASLLISSMLGAEVNPVQNPTLYLHLAFTATFFAGVFQASLGLLRLGFIVDFLSHATIVGFMAGAATVVCLQQLKGILGLTHFTHATDLVSVLRSVFTQVNQWRWESGVLGCGFLFFLLVTRYFSKKKPKFFWISAMAPLTSVILGSLLVFLTHAEKHGVEVIGELKKGLNPVSITDLVMVSPYLSVAIKTGIITGVIALAEGIAVGRSFAMFKHYNIDGNKEMVAIGTMNMVGSCFSCYLTTGPFSRSAVNYNAGCKTAVSNVIMAIAVMLTLLFLTPLFHYTPLVVLSSIIISAMLGLIDYEAAIHLWKVDKFDFLVCIGAYAGVVFASVEIGLVIAVAISVLRLLLFVARPRTLVLGNLPNSTVYRNVEQYPNADNVPGILILQIDAPIYFANSSYLRERIIRWVDEEEDRIKASGESTLQYVVLDMSAVGNIDTSGISMFEEIRKILDRRGLKLVLANPGAEVMKKLDKGKFIESLGHEWIYLTVAEAVAACNYMLHSCKPNPDEKAEPWNNV 659
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 77628122 77636912 - Hsped.03g20290.1 Hepe03g2029 567027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe03g2029 659 FunFam Sulfate transporter 31 495 641 - -
Hepe03g2029 659 PANTHER SULFATE TRANSPORTER 40 639 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe03g2029 659 CDD STAS_SulP_like_sulfate_transporter 516 631 - -
Hepe03g2029 659 Gene3D STAS domain 495 641 IPR036513 -
Hepe03g2029 659 ProSiteProfiles STAS domain profile. 515 638 IPR002645 -
Hepe03g2029 659 SUPERFAMILY SpoIIaa-like 520 639 IPR036513 -
Hepe03g2029 659 Pfam Sulfate permease family 84 464 IPR011547 GO:0016020(InterPro)
Hepe03g2029 659 ProSitePatterns SLC26A transporters signature. 113 134 IPR018045 GO:0008271(InterPro)|GO:0008272(InterPro)
Hepe03g2029 659 Pfam STAS domain 516 634 IPR002645 -
Hepe03g2029 659 NCBIfam sulfate permease 71 634 IPR001902 GO:0016020(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0398 Hepe-Chr1:55983863 Hepe03g2029 Hepe-Chr3:77628122 5.17e-255 dispersed
Hepe02g0764 Hepe-Chr2:8401530 Hepe03g2029 Hepe-Chr3:77628122 1.15e-210 dispersed
Hepe02g2353 Hepe-Chr2:68163732 Hepe03g2029 Hepe-Chr3:77628122 2.98e-244 dispersed
Hepe03g1569 Hepe-Chr3:72488887 Hepe03g2029 Hepe-Chr3:77628122 2.39e-261 dispersed
Hepe03g2029 Hepe-Chr3:77628122 Hepe09g0746 Hepe-Chr9:7147260 3.43e-225 dispersed
Hepe02g3006 Hepe-Chr2:79216345 Hepe03g2029 Hepe-Chr3:77628122 6.07e-106 transposed
Hepe03g2029 Hepe-Chr3:77628122 Hepe05g1581 Hepe-Chr5:65397265 0.0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe03g2029 K17471 - csv:101222260 1211.82