Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe03g2038 ATGAGCAAATACGAATCCAGTTACCATGAGATTCTACTTCTCAACATCAGCAAATCCAGAAGGAGATGGAGATTTGCTTTTGCAGCAATATACTCAATCCGGGCCATGCTTTCTCTAGCGGCGTCGAAAAGAAATGGCCATTGTAATTTACTCAACTTCAAGATCTTGCAGGAAGAAGATTCTTCTTCTGATAATGTGGAACAAACTATTACTATCTGCACAAAAGATGATCAGAAGAAACTGATTGAAATGGTGAAGAACAAAGACAGAGAAGCTTTTCGTGAGCTTGGCCGGGAGGCTGCAGCCATTGCTACTTCTCTCGGAACGAATCATGAGAAGGGAATCGAGGACAATGGCGAGGTTGTGAATGAACGGCGTAGAGTATTCGGTTCGAACACTTACCCCAAGCGGCCTCCTAAGAGTTTCTTTCATTTTGTGGTGGAAGCTTTCAAGGACACCACTATTCTCATTTTACTTGTGTGTGCGGCTCTGGCACTTGGGTTTGGAATAAAAGAACATGGAGTTCAAGAAGGATGGTATGAAGGTGGGAGCATATTTGTAGCTGTTGCCTTGGTAGTTGTTGTGTCATCTGTTAGTAACTTCAGACAGGAGGTTCAATTCGAGAAGTTGTCGAAAATAAGTAACAACATCAAAGTCGAGGTAATGAGAGATGGAAGGCGCATACAAGTTTCCATCTTCGATATCGTGGTTGGAGATGTCGTTATTCTAAAGCTTGGGGACCAAATTCCAGCTGATGGGTTGTTCTTAAGTGGCCATTCTTTGCTGGTGGATGAGTCAAGCATGACAGGAGAGAGCGATCATGTCGAACTCAATTCAACAGAGAACCCTTTCTTGTTGTCTGGAACAAAAGTAGTAGATGGCTATGGTCAAATGCTGGTGACATCAGTGGGAATGGACACGGCATGGGGCGAGATGATGAGCTCGATATCTCGGGATTCTGAGGAGCAAACACCATTGCAAGTTCGTCTTAACAAATTAACCACTTCGATAGGAAAGGTAGGACTCTCAGTTGCCTTCCTAGTCCTTGTTGTCATGTTAGCGCGCTATTTCACGGGAAACACGAAAGATGATTTCGGGAACGTAGAGTACAACGGTCGAAAAACGGACGTCGATGACGTGCTCAATGCAGTTACACGTATAGTTGCTGCTGCAGTTACCATAGTAGTGGTTGCAATTCCTGAAGGCCTGCCATTGGCTGTGACACTAACACTTGCTTACTCTATGAAGAGAATGATGGCAGATCAGGCAATGGTGAGGAAACTGTCTGCTTGTGAAACAATGGGATCGGCAACTGTGATTTGCACTGACAAAACAGGTACTTTGACATTGAACCAAATGAAAGTAACCAAATTTTGGCTTGGCCAAGAGTTCATTGAGGAAGAAAACTCTTCTCATACCATAGCAGAGACAGTTCATGAGTTGATAAATCAAGGAGTTGGCTTGAACACAACTGGTAGTGTCTATCAACCTTCACCAGAATCCAAAACTGAAATCTCTGGTAGTCCAACCGAGAAAGCGATTCTCTCATGGGCGGTCACGGAATTCGGTATGGACATGGTGAAGTTGAAGAAATCATATGCCATTCTTCATGTGGAAACCTTCAATTCAGAGAAGAAAAGAAGTGGGGTTTTGGTGAGAAAATTGGCTGATAACACAATCCATCAGCATTGGAAAGGAGCTGCTGAGATGATACTCTCATTGTGTTCAAGTTACTTTGAAAGAAATGGGAAAACATATCCCTTAGATAGCGAAAACCGACGAAAACTTGAGAACATAATCCAAGGAATGGCAGCAAGTAGCCTAAGATGTATTGCCTTTGCTTATAGACAAATCTCAGAAGAAGAGGAAAAAAACAGCATACCAAATCCAATTTCCTCAAACTTGAAAGAAGATGGCTTTACATTAATGGGAATAGTTGGCATTAAAGATCCATGTAGACCAGGGGTGAAGAAAGCTGTGGAAACATGTAAATCAGCTGGAGTTTCCATTAAAATGATCACAGGAGACAACATTTTCACAGCAAAAGCTATAGCCACAGAATGTGGAATATTGGATTTTGACCACAACAACACAGCAAACAGAGGAGGAGAAGTAATAGAAGGTTCCGAATTCCGAAACTACTCAAATGAAGAGAGACTGCAGAGGGTTGATCAAATCAAGGTAATGGCAAGATCCACTCCATTTGACAAGCTTCTGATGGTTCAATGCTTGAAACAGAAAGGCCATGTCGTAGCAGTAACCGGAGATGGTACGAACGACGCACCGGCTCTAAAAGAAGCCGACATAGGACTTTCGATGGGCATTGAAGGCACTGAGGTTGCAAAGGAGAGTTCAGACATTGTTATCTTGGATGATAACTTCACCACAGTAGCCACAGTCTTGAGGTGGGGAAGATGTGTTTACAACAACATCCAAAAATTCATCCAATTTCAATTGACAGTCAATGTAGCAGCTCTCACAATCAACTTCATAGCAGCAGTATCAGCTGGAGAAGTTCCCTTAACAGCAGTCCAATTATTGTGGGTGAATCTCATAATGGATACATTAGGAGCTCTTGCACTTGCTACTGAAAGACCAAATGATGAATTAATGCACAAGCCTCCAGTTGGAAGAACAGAGCCACTAATAACAAATATCATGTGGAGGAACCTTTTAGCTCAAGCTTTATACCAAATAACAATACTATTGATTTTCCAGTTCCAAGGAAGCAACATCTTCAATGTAAGTGGAGAGGTAAATGATACACTAATCTTCAACACTTTTGTTCTCTGCCAAATCTTTAATGAGTTCAACTCAAGGAAACTAGAGAAACAGAATGTCTTTGAAGGCATTCTAAAGAATCATTTGTTTCTAGGGATTGTGGGAGTAACAGTTGTTCTACAAGTTGTTATGGTAGAATTCCTAAAGAAATTTGCAAATACAGTGAATCTAAATGGTTGGCAGTGGGGACTTTGCATTGCTATTGCAGCTGTTTCTTGGCCTATTGGTTGGATTGTCAAATTCTTGCCTGTTTCTGATAAGCCTTTCCTTAGCTACTTCAAGTTTTTCAGGTTTTTCAAGGGCAGATCAGTTTACTAA 3099 41.72 MSKYESSYHEILLLNISKSRRRWRFAFAAIYSIRAMLSLAASKRNGHCNLLNFKILQEEDSSSDNVEQTITICTKDDQKKLIEMVKNKDREAFRELGREAAAIATSLGTNHEKGIEDNGEVVNERRRVFGSNTYPKRPPKSFFHFVVEAFKDTTILILLVCAALALGFGIKEHGVQEGWYEGGSIFVAVALVVVVSSVSNFRQEVQFEKLSKISNNIKVEVMRDGRRIQVSIFDIVVGDVVILKLGDQIPADGLFLSGHSLLVDESSMTGESDHVELNSTENPFLLSGTKVVDGYGQMLVTSVGMDTAWGEMMSSISRDSEEQTPLQVRLNKLTTSIGKVGLSVAFLVLVVMLARYFTGNTKDDFGNVEYNGRKTDVDDVLNAVTRIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMADQAMVRKLSACETMGSATVICTDKTGTLTLNQMKVTKFWLGQEFIEEENSSHTIAETVHELINQGVGLNTTGSVYQPSPESKTEISGSPTEKAILSWAVTEFGMDMVKLKKSYAILHVETFNSEKKRSGVLVRKLADNTIHQHWKGAAEMILSLCSSYFERNGKTYPLDSENRRKLENIIQGMAASSLRCIAFAYRQISEEEEKNSIPNPISSNLKEDGFTLMGIVGIKDPCRPGVKKAVETCKSAGVSIKMITGDNIFTAKAIATECGILDFDHNNTANRGGEVIEGSEFRNYSNEERLQRVDQIKVMARSTPFDKLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIEGTEVAKESSDIVILDDNFTTVATVLRWGRCVYNNIQKFIQFQLTVNVAALTINFIAAVSAGEVPLTAVQLLWVNLIMDTLGALALATERPNDELMHKPPVGRTEPLITNIMWRNLLAQALYQITILLIFQFQGSNIFNVSGEVNDTLIFNTFVLCQIFNEFNSRKLEKQNVFEGILKNHLFLGIVGVTVVLQVVMVEFLKKFANTVNLNGWQWGLCIAIAAVSWPIGWIVKFLPVSDKPFLSYFKFFRFFKGRSVY 1032
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 77823443 77827694 + Hsped.03g20380.1 Hepe03g2038 567036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe03g2038 1032 Gene3D - 121 317 - -
Hepe03g2038 1032 Pfam Cation transporter/ATPase, N-terminus 101 164 IPR004014 -
Hepe03g2038 1032 Pfam E1-E2 ATPase 217 419 - -
Hepe03g2038 1032 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 448 648 IPR023299 GO:0000166(InterPro)
Hepe03g2038 1032 SUPERFAMILY Calcium ATPase, transmembrane domain M 103 1011 IPR023298 -
Hepe03g2038 1032 SMART Cation_ATPase_N_a_2 94 170 IPR004014 -
Hepe03g2038 1032 FunFam Calcium-transporting ATPase 194 317 - -
Hepe03g2038 1032 Gene3D - 148 1008 - -
Hepe03g2038 1032 Pfam Cation transport ATPase (P-type) 495 578 - -
Hepe03g2038 1032 ProSitePatterns E1-E2 ATPases phosphorylation site. 443 449 IPR018303 -
Hepe03g2038 1032 FunFam Calcium-transporting ATPase 645 799 - -
Hepe03g2038 1032 SFLD C1.7: P-type atpase like 423 807 - -
Hepe03g2038 1032 Gene3D - 438 799 IPR023214 -
Hepe03g2038 1032 FunFam Calcium-transporting ATPase 771 1013 - -
Hepe03g2038 1032 Pfam haloacid dehalogenase-like hydrolase 641 768 - -
Hepe03g2038 1032 SUPERFAMILY HAD-like 439 859 IPR036412 -
Hepe03g2038 1032 PRINTS Sodium/potassium-transporting ATPase signature 183 203 - -
Hepe03g2038 1032 PRINTS Sodium/potassium-transporting ATPase signature 562 580 - -
Hepe03g2038 1032 PRINTS Sodium/potassium-transporting ATPase signature 434 455 - -
Hepe03g2038 1032 SFLD p-type atpase 423 807 IPR044492 -
Hepe03g2038 1032 FunFam Calcium-transporting ATPase 451 651 - -
Hepe03g2038 1032 PANTHER CATION TRANSPORTING ATPASE 65 1012 - GO:0005388(PANTHER)|GO:0005887(PANTHER)|GO:0019829(PANTHER)|GO:0043231(PANTHER)
Hepe03g2038 1032 Pfam Cation transporting ATPase, C-terminus 839 1009 IPR006068 -
Hepe03g2038 1032 NCBIfam HAD-IC family P-type ATPase 725 834 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Hepe03g2038 1032 NCBIfam HAD-IC family P-type ATPase 385 483 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Hepe03g2038 1032 Gene3D - 451 651 IPR023299 GO:0000166(InterPro)
Hepe03g2038 1032 NCBIfam calcium-translocating P-type ATPase, PMCA-type 75 1011 IPR006408 GO:0005388(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0070588(InterPro)
Hepe03g2038 1032 CDD P-type_ATPase_Ca_PMCA-like 122 887 - -
Hepe03g2038 1032 PRINTS P-type cation-transporting ATPase superfamily signature 666 676 - -
Hepe03g2038 1032 PRINTS P-type cation-transporting ATPase superfamily signature 264 278 - -
Hepe03g2038 1032 PRINTS P-type cation-transporting ATPase superfamily signature 754 773 - -
Hepe03g2038 1032 PRINTS P-type cation-transporting ATPase superfamily signature 644 655 - -
Hepe03g2038 1032 PRINTS P-type cation-transporting ATPase superfamily signature 778 790 - -
Hepe03g2038 1032 PRINTS P-type cation-transporting ATPase superfamily signature 441 455 - -
Hepe03g2038 1032 SUPERFAMILY Calcium ATPase, transduction domain A 216 315 IPR008250 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0300 Hepe-Chr2:2882380 Hepe03g2038 Hepe-Chr3:77823443 6.04e-108 dispersed
Hepe02g0301 Hepe-Chr2:2887473 Hepe03g2038 Hepe-Chr3:77823443 9.48e-111 dispersed
Hepe03g2038 Hepe-Chr3:77823443 Hepe08g2408 Hepe-Chr8:64608487 0.0 dispersed
Hepe03g2038 Hepe-Chr3:77823443 Hepe05g0808 Hepe-Chr5:20694183 6.64e-280 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe03g2038 K01537 - csv:101220140 1754.57