Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe03g2043 | ATGGCGAACAATCATTCCGACACTCCAGCCGATGATTTCCTCGAGCAGATTCTTGGGATTTCCCCTTTTGGGTCGGCGGAGCAAGGGTTAGCTGGAACTGACGGCGGCTTGGCCGGAGCTGCGTCGGCTCAGGCTCCGATGATGCTTCAGCTTAGCTCCGGCGACGGAGCTGGCCACATGGCTACGATTGGAAGTGGGAGTGTCGGTGGAGCAGGGTTCCATGGCGGACCCCCTTTTCCGTTGGGGTTGAGCTTGGACCAAGGGAAGGGCGGGTTTCTTAAGGCTGAGGAAGCTTCTGGAAGTGGGAAGCGGTATTGTGGTGAGGTTGTTGATGTTCGAGCTTCGTCTATGAAAAATATGTTTCAAGGCCAACAAATGCATGCTACTATGGGTGTAGCCCCACATCCACCAACAATGCGCCCTAGGGTACGGGCAAGACGAGGACAGGCGACTGATCCACATAGCATTGCCGAGCGGTTACGGCGAGAAAGGATAGCAGAGAGAATTAGGGCTTTGCAAGAGCTTGTTCCGAGTGTCAATAAGACGGATAGAGCTGCGATGCTCGATGAAATAGTGGACTACGTAAAGTTCCTACGTCTCCAAGTAAAGGTTCTGAGCATGAGTAGATTGGGTGGAGCTGGTGCTGTGGCACCACTTGTAACGGACATTCCACTATCATCAGTTGAGGAAGAAGGAAGTGAAGGCGGTAGGAATCAACCCGCATGGGATAAGTGGTCAAATGACGGTACGGAGAGACAAGTTGCTAAGCTTATGGAAGAAAACGTGGGAGCTGCAATGCAATTCCTTCAATCAAAGGCGCTCTGCATCATGCCCATCTCGTTGGCTTCGGCGATTTATCACACGCAACCGCCCGATAGCTCGAGTGTTGTGAAGCCAGAGAGCATCCCTCCTCCATAG | 918 | 52.83 | MANNHSDTPADDFLEQILGISPFGSAEQGLAGTDGGLAGAASAQAPMMLQLSSGDGAGHMATIGSGSVGGAGFHGGPPFPLGLSLDQGKGGFLKAEEASGSGKRYCGEVVDVRASSMKNMFQGQQMHATMGVAPHPPTMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEEGSEGGRNQPAWDKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLASAIYHTQPPDSSSVVKPESIPPP | 305 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 77926067 | 77929402 | + | Hsped.03g20430.1 | Hepe03g2043 | 567041 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe03g2043 | 305 | Gene3D | - | 144 | 206 | IPR036638 | GO:0046983(InterPro) | |
Hepe03g2043 | 305 | Pfam | Helix-loop-helix DNA-binding domain | 154 | 199 | IPR011598 | GO:0046983(InterPro) | |
Hepe03g2043 | 305 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 147 | 208 | IPR036638 | GO:0046983(InterPro) | |
Hepe03g2043 | 305 | FunFam | Basic helix-loop-helix transcription factor | 144 | 206 | - | - | |
Hepe03g2043 | 305 | SMART | finulus | 155 | 204 | IPR011598 | GO:0046983(InterPro) | |
Hepe03g2043 | 305 | MobiDBLite | consensus disorder prediction | 130 | 153 | - | - | |
Hepe03g2043 | 305 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 149 | 198 | IPR011598 | GO:0046983(InterPro) | |
Hepe03g2043 | 305 | PANTHER | TRANSCRIPTION FACTOR BHLH83-RELATED | 89 | 284 | IPR045843 | GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0006357(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe03g2043 | Hepe-Chr3:77926067 | Hepe09g0590 | Hepe-Chr9:5547958 | 6.53e-56 | dispersed | |
Hepe03g2043 | Hepe-Chr3:77926067 | Hepe09g1511 | Hepe-Chr9:38643167 | 1.71e-90 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
55333 | PF00010 | HLH | 1.10E-07 | No_clan | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe03g2043 | - | - | - | 0.0 |