Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe03g2055 | ATGGAAGAGGTTGAAGAAGCTAATAGACTAGCTGTTGAGAGTTGTCATAAAGTGTTGAATCTGTTGACTATGGCGTCTCCGTCTCCGTCGCCTCAAGATCAGTCGAAGCTCAGGAGTTGTTTAATGGCGGAAACTGGAGAGGCTGTGTTTAAGTTTAGGAAAGTTTTGTGTCTTCTTGATTCTTCTGGGTTGGGTCATGCAAGGGTCAGGAAAAACAAGGTTAAGAAGAGCTTTCTGTTTAGTAATTCCCCTTTTCCTCCTCCTCTTCCCCAATCCTTGTTTTTAGAAAGTTCTTCCATTAATTGCAGATTGGACCTTCTCCACGGGAGGAATTTGCAGATGGGTCCTCTTTCTTTGGGGAACCCATCTTTGGAATTGAGCTCAAATGCCAAATCTGCTGCTCATTTTCATCATCATTTCCTTCAGAACAGGGTGTTGTTGAACAATATTCCTAATCCAAAACAGCCTGAAATGGTGTATCTTAGGAGCAATAGTGGGATTAACTTGAATTTTGATAGCTCTAGCTGCACACAACACACAATGTCATCCACTAGGTCTTTTATTTCTTCCTTGAGCATTGATGGGAGTGTGGCTAACTTGGATGGGACTGGGAGTGCCTTTCATTTGATCGGGGCGCCCCGGTCGTCCGATCAGAATTCGAACCATAAGAGGAAGTGCAGTGGGAGAGGGGAAGATGGGAGTGTTAAATGTGGAAGTAGTGGGAGATGTCACTGCTCTAAGAAGAGGAAACATAGAGTGAAGCGGTCGATCAAGGTGCCCGCGATTAGTAACAAGCTTGCAGATATCCCTCCTGATGATTATTCATGGAGGAAATATGGCCAAAAGCCAATCAAGGGTTCTCCTCACCCGAGAGGATACTATAAGTGCAGCAGCATGAGAGGTTGTCCAGCAAGGAAGCACGTCGAGAGGTGTCTCGAGGAACCTTCAATGCTCATTGTTACATATGAAGGTGAACACAACCATCCCAGAATACCTTCTCAATCTGCAAATACTTGA | 1017 | 44.74 | MEEVEEANRLAVESCHKVLNLLTMASPSPSPQDQSKLRSCLMAETGEAVFKFRKVLCLLDSSGLGHARVRKNKVKKSFLFSNSPFPPPLPQSLFLESSSINCRLDLLHGRNLQMGPLSLGNPSLELSSNAKSAAHFHHHFLQNRVLLNNIPNPKQPEMVYLRSNSGINLNFDSSSCTQHTMSSTRSFISSLSIDGSVANLDGTGSAFHLIGAPRSSDQNSNHKRKCSGRGEDGSVKCGSSGRCHCSKKRKHRVKRSIKVPAISNKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEEPSMLIVTYEGEHNHPRIPSQSANT | 338 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 78089943 | 78092262 | - | Hsped.03g20550.1 | Hepe03g2055 | 567053 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe03g2055 | 338 | Gene3D | WRKY domain | 256 | 331 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe03g2055 | 338 | Pfam | WRKY DNA -binding domain | 272 | 329 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe03g2055 | 338 | SMART | WRKY_cls | 270 | 330 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe03g2055 | 338 | FunFam | WRKY transcription factor 65 | 254 | 331 | - | - | |
Hepe03g2055 | 338 | ProSiteProfiles | WRKY domain profile. | 265 | 331 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe03g2055 | 338 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 2 | 334 | IPR044810 | GO:0003700(InterPro) | |
Hepe03g2055 | 338 | MobiDBLite | consensus disorder prediction | 211 | 237 | - | - | |
Hepe03g2055 | 338 | Pfam | Plant zinc cluster domain | 223 | 268 | IPR018872 | - | |
Hepe03g2055 | 338 | SUPERFAMILY | WRKY DNA-binding domain | 268 | 330 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe03g2055 | Hepe-Chr3:78089943 | Hepe04g1263 | Hepe-Chr4:68169831 | 3.97e-55 | dispersed | |
Hepe03g2055 | Hepe-Chr3:78089943 | Hepe06g1960 | Hepe-Chr6:70850247 | 1.91e-112 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
55336 | PF03106 | WRKY | 3.30E-26 | CL0274 | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe03g2055 | - | - | - | 0.0 |