Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe03g2097 ATGAAAAAGCTTAAAAAATCAGAGATGCTTCGAAGGGGGCAGGTGGAGCATGTGAGAGCTGAAAGAAATCTGCTTGCTGAAGTAGACAGCAATTGCATCGTGAAACTCTATTGTTCTTTTCAAGATGATGAGTTTCTTTACCTTATTATGGAGTACCTACCTGGTGGAGATATGATGACTTTATTGATGAGAAAGGATACTTTGACTGAAGATGAAGCAAGGTTTTACGTTGGAGAGATAGTTTTGGCTATTGAATCTATTCATAAGCACAACTACATTCATAGAGATATTAAGCCTGACAACTTGCTGCTTGATAAATTTGGGCACTTGAGACTCTCAGACTTTGGACTATGCAAGCCATTAGATTGCAGTACACTCCAAGAACAAGATTTTGATAGTGCCCGTAATGAAGCGGGACAAACTGATGAGCGCAATGCAGCTCCTACACGTACTCAACAAGAGCAACTACAACATTGGCAGAAGAATCGTAGAATGCTTGCTTATTCAACAGTTGGAACACCAGATTATATTGCTCCAGAGGTTTTGTTGAAGAAAGGTTATGGAATGGAATGCGACTGGTGGTCCCTTGGAGCTATTATGTATGAAATGCTTGTTGGCTACCCACCTTTTTACTCTGATGATCCAATGTCGACATGTCGGAAGATAGTGAACTGGAGAACTCATTTGAAGTTCCCTGACGAGGCAAAGCTATCTCCCATGGCAAAAGATCTCGTCAGCAAACTACTATGCAATGTTAACCAGAGGCTAGGTACAAATGGCGCAGATGAAATTAAGGTTCATCTGTGGTTTGACAGTATTGAATGGGATAGGCTATACCAAATGGAAGCTGCATTTGTTCCTGAGGTTAAAGATGAGCTAGACACTCAAAATTTTGAAAAGTTTGAAGAGTCTGACTCGCAAAGCAGTACTTCATCTAAATCAGGTCCATGGAGAAAGATGCTCTCATCTAAGGACATCAACTTTGTTGGATACACTTATAAGAACTTTGAAATTGTCAACGATTATCAATTGCCTGGGATGGCTGAATTGAAGAAAAAAAGCAGCAAACCAAAAAGACCTTCAATCAAGTCACTCTTTGATGGCGAGTCGGAGGTATTAGATGCATCTGATACATCTAATCATAGTCATAGTCAGCCTACCGAAGGTAGCTTTTCGAACTCAACGACATCTCAATTGGATGTAGTCGAAAAGAGGGAAGAGCCAATGTAA 1230 40.41 MKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVGEIVLAIESIHKHNYIHRDIKPDNLLLDKFGHLRLSDFGLCKPLDCSTLQEQDFDSARNEAGQTDERNAAPTRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPDEAKLSPMAKDLVSKLLCNVNQRLGTNGADEIKVHLWFDSIEWDRLYQMEAAFVPEVKDELDTQNFEKFEESDSQSSTSSKSGPWRKMLSSKDINFVGYTYKNFEIVNDYQLPGMAELKKKSSKPKRPSIKSLFDGESEVLDASDTSNHSHSQPTEGSFSNSTTSQLDVVEKREEPM 409
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 78932258 78938735 - Hsped.03g20970.1 Hepe03g2097 567095
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe03g2097 409 SMART serkin_6 1 270 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe03g2097 409 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 338 IPR050236 GO:0004674(PANTHER)|GO:0018105(PANTHER)|GO:0035556(PANTHER)
Hepe03g2097 409 MobiDBLite consensus disorder prediction 351 409 - -
Hepe03g2097 409 FunFam Non-specific serine/threonine protein kinase 57 124 - -
Hepe03g2097 409 MobiDBLite consensus disorder prediction 373 399 - -
Hepe03g2097 409 ProSiteProfiles AGC-kinase C-terminal domain profile. 271 343 IPR000961 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe03g2097 409 FunFam Non-specific serine/threonine protein kinase 169 288 - -
Hepe03g2097 409 Pfam Protein kinase domain 1 125 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe03g2097 409 Pfam Protein kinase domain 167 270 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe03g2097 409 Gene3D Transferase(Phosphotransferase) domain 1 57 288 - -
Hepe03g2097 409 Pfam Protein kinase C terminal domain 289 333 IPR017892 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe03g2097 409 MobiDBLite consensus disorder prediction 351 365 - -
Hepe03g2097 409 ProSiteProfiles Protein kinase domain profile. 1 270 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe03g2097 409 MobiDBLite consensus disorder prediction 133 155 - -
Hepe03g2097 409 SUPERFAMILY Protein kinase-like (PK-like) 1 321 IPR011009 -
Hepe03g2097 409 SMART pkinase_C_6 271 335 IPR000961 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe03g2097 409 CDD STKc_NDR_like 1 334 - -
Hepe03g2097 409 ProSitePatterns Serine/Threonine protein kinases active-site signature. 92 104 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe03g2097 409 Gene3D Phosphorylase Kinase; domain 1 1 299 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g2097 Hepe-Chr3:78932258 Hepe04g2071 Hepe-Chr4:75535640 1.40e-192 dispersed
Hepe03g2097 Hepe-Chr3:78932258 Hepe01g1901 Hepe-Chr1:83849529 6.74e-167 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72691 PF00069 Pkinase 5.90E-53 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe03g2097 K08790 - csv:101221720 737.643