Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe03g2097 | ATGAAAAAGCTTAAAAAATCAGAGATGCTTCGAAGGGGGCAGGTGGAGCATGTGAGAGCTGAAAGAAATCTGCTTGCTGAAGTAGACAGCAATTGCATCGTGAAACTCTATTGTTCTTTTCAAGATGATGAGTTTCTTTACCTTATTATGGAGTACCTACCTGGTGGAGATATGATGACTTTATTGATGAGAAAGGATACTTTGACTGAAGATGAAGCAAGGTTTTACGTTGGAGAGATAGTTTTGGCTATTGAATCTATTCATAAGCACAACTACATTCATAGAGATATTAAGCCTGACAACTTGCTGCTTGATAAATTTGGGCACTTGAGACTCTCAGACTTTGGACTATGCAAGCCATTAGATTGCAGTACACTCCAAGAACAAGATTTTGATAGTGCCCGTAATGAAGCGGGACAAACTGATGAGCGCAATGCAGCTCCTACACGTACTCAACAAGAGCAACTACAACATTGGCAGAAGAATCGTAGAATGCTTGCTTATTCAACAGTTGGAACACCAGATTATATTGCTCCAGAGGTTTTGTTGAAGAAAGGTTATGGAATGGAATGCGACTGGTGGTCCCTTGGAGCTATTATGTATGAAATGCTTGTTGGCTACCCACCTTTTTACTCTGATGATCCAATGTCGACATGTCGGAAGATAGTGAACTGGAGAACTCATTTGAAGTTCCCTGACGAGGCAAAGCTATCTCCCATGGCAAAAGATCTCGTCAGCAAACTACTATGCAATGTTAACCAGAGGCTAGGTACAAATGGCGCAGATGAAATTAAGGTTCATCTGTGGTTTGACAGTATTGAATGGGATAGGCTATACCAAATGGAAGCTGCATTTGTTCCTGAGGTTAAAGATGAGCTAGACACTCAAAATTTTGAAAAGTTTGAAGAGTCTGACTCGCAAAGCAGTACTTCATCTAAATCAGGTCCATGGAGAAAGATGCTCTCATCTAAGGACATCAACTTTGTTGGATACACTTATAAGAACTTTGAAATTGTCAACGATTATCAATTGCCTGGGATGGCTGAATTGAAGAAAAAAAGCAGCAAACCAAAAAGACCTTCAATCAAGTCACTCTTTGATGGCGAGTCGGAGGTATTAGATGCATCTGATACATCTAATCATAGTCATAGTCAGCCTACCGAAGGTAGCTTTTCGAACTCAACGACATCTCAATTGGATGTAGTCGAAAAGAGGGAAGAGCCAATGTAA | 1230 | 40.41 | MKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVGEIVLAIESIHKHNYIHRDIKPDNLLLDKFGHLRLSDFGLCKPLDCSTLQEQDFDSARNEAGQTDERNAAPTRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPDEAKLSPMAKDLVSKLLCNVNQRLGTNGADEIKVHLWFDSIEWDRLYQMEAAFVPEVKDELDTQNFEKFEESDSQSSTSSKSGPWRKMLSSKDINFVGYTYKNFEIVNDYQLPGMAELKKKSSKPKRPSIKSLFDGESEVLDASDTSNHSHSQPTEGSFSNSTTSQLDVVEKREEPM | 409 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 78932258 | 78938735 | - | Hsped.03g20970.1 | Hepe03g2097 | 567095 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe03g2097 | 409 | SMART | serkin_6 | 1 | 270 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe03g2097 | 409 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 1 | 338 | IPR050236 | GO:0004674(PANTHER)|GO:0018105(PANTHER)|GO:0035556(PANTHER) | |
Hepe03g2097 | 409 | MobiDBLite | consensus disorder prediction | 351 | 409 | - | - | |
Hepe03g2097 | 409 | FunFam | Non-specific serine/threonine protein kinase | 57 | 124 | - | - | |
Hepe03g2097 | 409 | MobiDBLite | consensus disorder prediction | 373 | 399 | - | - | |
Hepe03g2097 | 409 | ProSiteProfiles | AGC-kinase C-terminal domain profile. | 271 | 343 | IPR000961 | GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe03g2097 | 409 | FunFam | Non-specific serine/threonine protein kinase | 169 | 288 | - | - | |
Hepe03g2097 | 409 | Pfam | Protein kinase domain | 1 | 125 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe03g2097 | 409 | Pfam | Protein kinase domain | 167 | 270 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe03g2097 | 409 | Gene3D | Transferase(Phosphotransferase) domain 1 | 57 | 288 | - | - | |
Hepe03g2097 | 409 | Pfam | Protein kinase C terminal domain | 289 | 333 | IPR017892 | GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe03g2097 | 409 | MobiDBLite | consensus disorder prediction | 351 | 365 | - | - | |
Hepe03g2097 | 409 | ProSiteProfiles | Protein kinase domain profile. | 1 | 270 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe03g2097 | 409 | MobiDBLite | consensus disorder prediction | 133 | 155 | - | - | |
Hepe03g2097 | 409 | SUPERFAMILY | Protein kinase-like (PK-like) | 1 | 321 | IPR011009 | - | |
Hepe03g2097 | 409 | SMART | pkinase_C_6 | 271 | 335 | IPR000961 | GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe03g2097 | 409 | CDD | STKc_NDR_like | 1 | 334 | - | - | |
Hepe03g2097 | 409 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 92 | 104 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe03g2097 | 409 | Gene3D | Phosphorylase Kinase; domain 1 | 1 | 299 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe03g2097 | Hepe-Chr3:78932258 | Hepe04g2071 | Hepe-Chr4:75535640 | 1.40e-192 | dispersed | |
Hepe03g2097 | Hepe-Chr3:78932258 | Hepe01g1901 | Hepe-Chr1:83849529 | 6.74e-167 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
72691 | PF00069 | Pkinase | 5.90E-53 | CL0016 | Hepe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe03g2097 | K08790 | - | csv:101221720 | 737.643 |