Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe03g2138 | ATGGATTATCCAAAGAAGTCAAACAAAATCAGAGACATCGTAAGGCTTCAACAAATCGTGAAGAAGTGGAAGAGGTTAGCAAATGGGGAAAAGAGCAGGAAGACAGGAATGAAGAAGTGCCTTTCCTTTACAGAGGATGTTGTTCCAAAAGGGCTCGCGCTTCTTATGTTTGGCATTTTCGGGGAAAAGGAAGGAATATTAGGAATTTTCAAAATTCAGCGACCAGTCTCAGGGGGCGATTTGCCCCAGGGTGGCGAGTATAACCCTTATCCTATTGCGCGGAGGCTAAATTCCTCCCATACCGTGGTCATGGATGATGACATTGAAAATTCTAGTTTGAGGGCATACCAAGATAGGCAAAGGACTTTCCCTGACATGCGTAGTAAAGTCAACACCCCATTCATATTTCGAATTTTGATGGGGATAAATATTCGTGTTCTCTTAGTACTTCTTCTCTTCGCATTTGGATTTATATTCTACATTGGAGCAAGCACTTCCCCTATTATAGTGTTTGTCTTGTCGATTTGCATTATCAGCTTCTGCTTTGCGATATATCTTACCAAGTGGGTGCTCTCGAAAGATGAAGGGCCACAGGAGATGGTTCAGATTTCAGAGGCAATACGTGATGGGGCAGAAGGTTTCTTTAGGACGCAGTATGGTACCATCTCTAAAATGGCTATGTTACTTGCAGTAGTGATTCTTTGCATATACTTGTTTCGTAGTACTACTCCTCAACAAGAATCTTCTGGAATAGGGAGGTCAACATCTGCTTATATCACTGTTGCAGCATTTCTGTTAGGAGCCTTGTGTTCAGGTATTGCAGGGTATGTTGGAATGTGGGTTTCAGTTCGTGCAAATGTCAGGGTCTCTAGTGCTGCCAGGCGGTCTGCGAGGGAGGCATTGCAGATCGCTGTTCGCGCTGGTGGTTTTTCTGCCATAGTTGTTGTTGGCATGGCTGTTATTGGTATAGCTATCCTGTATGCTGCATTTCATGTTTTATTGGATGTGGGTTCGCCAGGTTCAACAAAGGTTACTGACTTGCCTCTTCTCCTTGTGGGTTATGGTTTTGGAGCTTCTTTCGTTGCCCTTTTTGCTCAGTTGGGTGGTGGTATCTATACAAAAGCTGCTGATGTTGGAGCAGACCTTGTTGGAAAAGTTGAGCAGGGGATACCAGAAGATGATCCAAGAAATCCTGCTGTTATTGCAGATCTGGTTGGAGACAATGTTGGCGATTGTGCCGCTCGAGGTGCAGATCTTTTTGAAAGCATTGCTGCTGAAATCATTAGTGCCATGATACTTGGGGGAACAATGGCACGACGCTATCCATCTGGTTTCATTTTGTTTCCACTGGTAGTACACTCCTTTGATCTGGTGATTTCATCAATTGGTATTCTCTCTATCAGGAGGGGTACACGTGAATCTGGTGTGAAGAGTCCCATAGAGGATCCAATGGCTATTCTGCAGAGAGGATATTCTGTCACTCTTGTTTTGGCTGTTCTAACATTTGGTGTGTCTACCCGGTGGTTGCTTCATACTGAACAAGCACCTTCTGCATGGTTCAACTTTGCCTTGTGTGGGTTGGTTGGTATTATCACTGCTTACCTTTTTGTCTGTATCACCAAATACTACACTGACTACAAACATGAGCCTGTGCGTTCATTAGCACTTTCTAGCTCCACGGGCCATGGGACAAACATAATTGCCGGAGTCAGCTTGGGCCTGGAATCAACAGCACTTCCTGTTCTTGTTATTTGTGTATCTATTGTTTCGGCATTCTGGTTGGGTCAAACATCAGGACTTGTGGACGAATCTGGAAATCCAACAGGTGGGCTGTTTGGTACTGCTGTAGCAACAATGGGAATGCTCAGCACTGCTGCCTATGTTCTCACAATGGATATGTTTGGGCCAATAGCTGATAATGCTGGTGGAATTGTTGAGATGAGTCAGCAGCCAGAAAGCGTTCGGGAGATTACTGATCTTCTTGATGCAGTAGGTAATACAACTAAAGCGACCACAAAAGGTTTTGCCATTGGCTCTGCAGCACTTGCATCCTTCCTACTTTTTAGTGCTTATATGGATGAAGTAGCTACATTTGCTCAAGAACCTTTTAAACAGGTAGATATTGCAATTCCAGAAGTTTTCGTTGGTGGTTTGTTGGGTTCCATGCTTATTTTTCTCTTTAGTGGTTGGGCCTGCTCTGCTGTTGGCCGAACAGCCCAAGAGGTTGTAAAGGAAGTAAGAAGACAATTCATTGAGAGGCCTGGTATAATGGACTATACGGAGAAACCAGATTATGGACGTTGCGTTGCTATTGTAGCATCAGCATCTTTAAGGGAGATGATTAAACCTGGTGCTTTGGCTATCATTTCTCCTATGGCTGTTGGCCTCCTGTTTAGAATACTGGGACACTATACTGGGCATCCGCTTCTAGGGGCGAAGGTTGTTGCTGCGATGCTGATGTTTGCGACAGTTTCGGGTATTCTCATGGCCCTATTTCTGAACACGGCAGGGGGTGCGTGGGATAATGCGAAGAAGTATATAGAGACGGGGGTTCTTGGAGGTAAAGGTAGTGATTGTCATAAAGCAGCCGTAACTGGGGACACAAAGGGTGGCATCCCCGATGAAAACATAATAGTTTTCATGTATGACGATATTGCATTCCATCCAGACAATCCAACCCCAGGAATTATTATCAACAAACCCAATGGCATTGATGTTTACCATGGAGTTCCCAAGGACTACACTGGAAAGCATGTGAATGCACTCAACTTTTACGCTGCCATTTCCGCCAACAAATCTACTGGTCGTAAGCTTCTCGATAGTGGCCCCAATGATCATATTTTCATCTACTACACCGACCATGGTGCTGCAGGGATACTCGGAATGCCCGAGGGTGATTATATTTACGTCAAGGACCTAATACACGTGCTGAAGCAAAAACACGAAGCCAAAGCTTACAAAAGCATGGTAATATATGTGGAAGCATGCGACGACAGGCATGATTTGAGAAAGGAAACTTTGAACCAACAATATCAAGCGGTACGAAGAAGAACTTTGGATGATAACTTGGGTTACGGTTCTCATGTAATGTTGTATGGAAACAAAAGCATCGGCAACAATTTCCTTAGCACCTATATTGGTAATACCACCCACCAGCCTCATCATCATCATAATCAGATCATCTCTTCAAATACGGTCACCCAGCGTGATGCCACTCTCATTCATTATTTGTACAAGTTTCAAAATGCTCCAACTGGCTCTACAAAAAAGATGGAGGCTAGAAAGCAGCTAGAGGATGAAATTTTGAATAGAAGGCACGCTGACTACACTATAAATCACATTGCTCAACTTTTGTTTGGACATGCAAACAGCTCACAAGTGTTAAACAACGTTAGGCAGGAAGGACAATCCCTTGTTGATGATTGGGACTGCTTTGCAAAATTTGTGAAAACCTATGAGAAACATTGCAAAAGACTGTCAAGCTATGGGATGAAATACACACGAGCTCTAGCTAATATATGCAATGCTGGGATTACAACCAATCAAATGGAACAGGCCTGTCTGCAAACTTGCCTTCCTACAACTTGA | 3588 | 43.84 | MDYPKKSNKIRDIVRLQQIVKKWKRLANGEKSRKTGMKKCLSFTEDVVPKGLALLMFGIFGEKEGILGIFKIQRPVSGGDLPQGGEYNPYPIARRLNSSHTVVMDDDIENSSLRAYQDRQRTFPDMRSKVNTPFIFRILMGINIRVLLVLLLFAFGFIFYIGASTSPIIVFVLSICIISFCFAIYLTKWVLSKDEGPQEMVQISEAIRDGAEGFFRTQYGTISKMAMLLAVVILCIYLFRSTTPQQESSGIGRSTSAYITVAAFLLGALCSGIAGYVGMWVSVRANVRVSSAARRSAREALQIAVRAGGFSAIVVVGMAVIGIAILYAAFHVLLDVGSPGSTKVTDLPLLLVGYGFGASFVALFAQLGGGIYTKAADVGADLVGKVEQGIPEDDPRNPAVIADLVGDNVGDCAARGADLFESIAAEIISAMILGGTMARRYPSGFILFPLVVHSFDLVISSIGILSIRRGTRESGVKSPIEDPMAILQRGYSVTLVLAVLTFGVSTRWLLHTEQAPSAWFNFALCGLVGIITAYLFVCITKYYTDYKHEPVRSLALSSSTGHGTNIIAGVSLGLESTALPVLVICVSIVSAFWLGQTSGLVDESGNPTGGLFGTAVATMGMLSTAAYVLTMDMFGPIADNAGGIVEMSQQPESVREITDLLDAVGNTTKATTKGFAIGSAALASFLLFSAYMDEVATFAQEPFKQVDIAIPEVFVGGLLGSMLIFLFSGWACSAVGRTAQEVVKEVRRQFIERPGIMDYTEKPDYGRCVAIVASASLREMIKPGALAIISPMAVGLLFRILGHYTGHPLLGAKVVAAMLMFATVSGILMALFLNTAGGAWDNAKKYIETGVLGGKGSDCHKAAVTGDTKGGIPDENIIVFMYDDIAFHPDNPTPGIIINKPNGIDVYHGVPKDYTGKHVNALNFYAAISANKSTGRKLLDSGPNDHIFIYYTDHGAAGILGMPEGDYIYVKDLIHVLKQKHEAKAYKSMVIYVEACDDRHDLRKETLNQQYQAVRRRTLDDNLGYGSHVMLYGNKSIGNNFLSTYIGNTTHQPHHHHNQIISSNTVTQRDATLIHYLYKFQNAPTGSTKKMEARKQLEDEILNRRHADYTINHIAQLLFGHANSSQVLNNVRQEGQSLVDDWDCFAKFVKTYEKHCKRLSSYGMKYTRALANICNAGITTNQMEQACLQTCLPTT | 1195 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 79507765 | 79552998 | + | Hsped.03g21380.1 | Hepe03g2138 | 567136 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe03g2138 | 1195 | CDD | legumain_C | 1070 | 1187 | IPR048501 | - | |
| Hepe03g2138 | 1195 | Gene3D | - | 1069 | 1194 | IPR046427 | - | |
| Hepe03g2138 | 1195 | Pfam | Peptidase C13 family | 869 | 997 | IPR001096 | GO:0006508(InterPro)|GO:0008233(InterPro) | |
| Hepe03g2138 | 1195 | Pfam | Legumain, prodomain | 1095 | 1191 | IPR048501 | - | |
| Hepe03g2138 | 1195 | Gene3D | - | 999 | 1068 | - | - | |
| Hepe03g2138 | 1195 | Pfam | Inorganic H+ pyrophosphatase | 177 | 870 | IPR004131 | GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro) | |
| Hepe03g2138 | 1195 | PRINTS | Hemoglobinase (C13) cysteine protease signature | 937 | 956 | IPR001096 | GO:0006508(InterPro)|GO:0008233(InterPro) | |
| Hepe03g2138 | 1195 | PRINTS | Hemoglobinase (C13) cysteine protease signature | 913 | 928 | IPR001096 | GO:0006508(InterPro)|GO:0008233(InterPro) | |
| Hepe03g2138 | 1195 | PRINTS | Hemoglobinase (C13) cysteine protease signature | 866 | 895 | IPR001096 | GO:0006508(InterPro)|GO:0008233(InterPro) | |
| Hepe03g2138 | 1195 | PRINTS | Hemoglobinase (C13) cysteine protease signature | 986 | 1002 | IPR001096 | GO:0006508(InterPro)|GO:0008233(InterPro) | |
| Hepe03g2138 | 1195 | FunFam | Vacuolar-processing enzyme beta-isozyme | 1068 | 1195 | - | - | |
| Hepe03g2138 | 1195 | Gene3D | - | 861 | 998 | - | - | |
| Hepe03g2138 | 1195 | PANTHER | K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP | 170 | 870 | IPR004131 | GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro) | |
| Hepe03g2138 | 1195 | Hamap | Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. | 166 | 900 | IPR004131 | GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro) | |
| Hepe03g2138 | 1195 | NCBIfam | V-type H(+)-translocating pyrophosphatase | 171 | 870 | IPR004131 | GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe03g2138 | Hepe-Chr3:79507765 | Hepe08g2654 | Hepe-Chr8:68541636 | 5.36e-122 | dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe03g2138 | K23025 | - | csv:101217198 | 1362.44 |