Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe04g0093 | ATGAAAAAGACAGCCAAGGTTTTGGATGAGATGTTTAATAAATGGTTGAAAGAACATCGACAAAAGGGAAATTCCGGTGAGGTGCAGACAGAAGGGTATGACTTCATGGATGTCATGCTTTCTGCTGTTAAAGATTACGGACAACTTTCTAACTACGATCATGATACTATCATCAAAGCTACATGTTTGGCTCTAATATTGGGTGGATATGATACTACATCAATAACAATGCAATGGGCTCTTTCTCTACTTCTGAACCACGAAGAAGCACTGAAGAAAGTCCAGCTTGAGTTAGACCAACAAATTGGAAGAGAAAGAGAAGTGAAAGAATCAGATGTGAAAAATCTAATATATCTTCAAGCTATAGTGAAGGAAACATTACGTTTATACCCTGCAGCACCAATTGGAATTCCTCATGAGTCTATAGAAAACTGCACAGTTGGTGACTACCACATCTTTGCAAAGACTCGGCTAATAGTGAATCTTCAGAAGCTGCATAGAGATCCTCTTGTTTGGGAGGATCCTAACGAATTTCGACCAGAAAGATTTCTAACAACTTCTCAAAAGCACTTTGATGTTAGAGGGCAATGTCCTCAACTAATACCATTTGGAAGTGGTCGAATGATATGTCCTGGAATCACTTTTGGCCTCCAACTTTTGTATCTCACACTTGCAAATCTACTTCATATGTTTGATGTTGGCAGGCCATCCAAAGAATTGCTTGATATGGAAGAGGGTGTTGGAATGACTTGTATTAGAAAGAACCCTCTTCAAATTGTTTTAAATCCACGTCTCCTGGCTGAAGTTTATGGATGA | 816 | 38.85 | MKKTAKVLDEMFNKWLKEHRQKGNSGEVQTEGYDFMDVMLSAVKDYGQLSNYDHDTIIKATCLALILGGYDTTSITMQWALSLLLNHEEALKKVQLELDQQIGREREVKESDVKNLIYLQAIVKETLRLYPAAPIGIPHESIENCTVGDYHIFAKTRLIVNLQKLHRDPLVWEDPNEFRPERFLTTSQKHFDVRGQCPQLIPFGSGRMICPGITFGLQLLYLTLANLLHMFDVGRPSKELLDMEEGVGMTCIRKNPLQIVLNPRLLAEVYG | 271 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 29181078 | 29182550 | + | Hsped.04g00930.1 | Hepe04g0093 | 567231 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe04g0093 | 271 | PRINTS | P450 superfamily signature | 121 | 132 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g0093 | 271 | PRINTS | P450 superfamily signature | 68 | 85 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g0093 | 271 | PRINTS | P450 superfamily signature | 201 | 210 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g0093 | 271 | Gene3D | Cytochrome P450 | 1 | 267 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g0093 | 271 | PRINTS | E-class P450 group I signature | 57 | 74 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g0093 | 271 | PRINTS | E-class P450 group I signature | 77 | 103 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g0093 | 271 | PRINTS | E-class P450 group I signature | 120 | 138 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g0093 | 271 | PRINTS | E-class P450 group I signature | 161 | 185 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g0093 | 271 | PRINTS | E-class P450 group I signature | 210 | 233 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g0093 | 271 | PRINTS | E-class P450 group I signature | 200 | 210 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g0093 | 271 | PANTHER | CYTOCHROME P450 82C3-RELATED | 1 | 265 | IPR050651 | - | |
| Hepe04g0093 | 271 | Coils | Coil | 84 | 104 | - | - | |
| Hepe04g0093 | 271 | Pfam | Cytochrome P450 | 2 | 251 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g0093 | 271 | SUPERFAMILY | Cytochrome P450 | 2 | 264 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g0093 | 271 | FunFam | Uncharacterized protein | 1 | 266 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe04g0093 | Hepe-Chr4:29181078 | Hepe04g0098 | Hepe-Chr4:29448452 | 3.58e-121 | dispersed | |
| Hepe04g0093 | Hepe-Chr4:29181078 | Hepe04g0095 | Hepe-Chr4:29304125 | 6.38e-125 | proximal | |
| Hepe04g0087 | Hepe-Chr4:28799005 | Hepe04g0093 | Hepe-Chr4:29181078 | 2.63e-77 | wgd | |
| Hepe04g0093 | Hepe-Chr4:29181078 | HepeContig67g0029 | Hepe-ChrContig67:4294175 | 9.88e-31 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe04g0093 | - | - | - | 0.0 |