Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe04g0241 | ATGGGAGACGGCAATAACACCAACAGAGGCCTTGTCTCGGCCAACGCCGCCGCCAATTCCAACCGGAACAACGGCAGCCACCACAGGAAACCGGAGTGGCTACAGCAGTACGATCTGATAGGGAAGATCGGAGAGGGAACCTATGGCCTTGTGTTCCTTGCTAAAATCAAACCCCCTTCTCCGAGTCGCGGCAAGTCCATTGCCATCAAGAAGTTCAAGCAATCCAAGGACGGTGATGGCGTCTCCCCAACTGCCATCCGCGAAATTATGTTACTGCGGGAAATAACACATGAGAATGTCGTCAAGCTTGTAAATGTTCATATCAACCATGCCGATATGTCGCTGTATCTAGCTTTTGATTATGCTGAACATGACCTCTACGAAATCATTAGACATCATCGGGACAAAGCTAACCATCCCCTTAATCAGTACACCGTTAAATCCTTGCTCTGGCAACTTCTCAATGGATTGAACTATCTCCACAGTAACTGGATCATTCATCGTGATCTAAAGCCCTCAAATATTTTGGTAATGGGTGAAGGAGAAGAACAAGGAGTGGTTAAAATAGCTGATTTTGGACTTGCAAGAGTATACCAAGCTCCCTTGAAGCCATTATCTGAAAATGGAGTTGTCGTCACCATTTGGTATCGTGCACCTGAACTTCTCCTTGGAGCAAAGCACTATACTAGTGCTGTTGATACGTGGGCGGTTGGATGTATTTTTGCTGAGCTTTTGACGTTGAAGCCATTATTTCAAGGGCAAGAAGTCAAAGGGACTCCGAATCCTTTCCAGCTTGATCAACTCGACAAGATTTTTAAGGTTTTAGGCCATCCCACACTAGACAAGTGGCCAACGCTTGCTAATCTTCCACATTGGCAACAAGATTTACAGCACATACAGGGGCACAAATATGACAATGTTGGATTGTATAATGTTGTCCACCTTTCTCCAAAAAGTCCTGCATACGATCTTCTGTCCAAAATGCTCGAGTATGATCCTCGAAAGCGTATAACAGCAGCCCAAGCTCTTGAGCATGAGTATTTTCGTTTAGAACCTCTGCCGGGATACAATACTCTGGTACCAATCCAACCTGGAGAGAAGGTCATTAATTATCCAACTCGCCCTGTGGACACAACCACGGACTTTGAGGGAACAACCAACATTCAACCCTCACAAACGGTAACATCTGGAAATGCTGTAAACATGCAAGGTGCTCATGCTGTAAACAGATCCGTCTCTCGGCCAATGGCAGGAGTTGGCATGCAAAGGATTCCGCCTCAGAGCATGGCTGCGTATAACCTTGCATCTCAGGCTGGGATGGGTATGAATCCTGGTGGTAGTATGAATCCTGGGGGCATCCCTATGCAGCGAGGTGTTTCTGCCCAAGCTCATCAGCAACAACAGTTGAGGAGAAAAGATCAAGGAATGGGAATGCCAGGTTATCCTCCGCAGCAGAAACAACAAAGACGCTACTGA | 1476 | 46.54 | MGDGNNTNRGLVSANAAANSNRNNGSHHRKPEWLQQYDLIGKIGEGTYGLVFLAKIKPPSPSRGKSIAIKKFKQSKDGDGVSPTAIREIMLLREITHENVVKLVNVHINHADMSLYLAFDYAEHDLYEIIRHHRDKANHPLNQYTVKSLLWQLLNGLNYLHSNWIIHRDLKPSNILVMGEGEEQGVVKIADFGLARVYQAPLKPLSENGVVVTIWYRAPELLLGAKHYTSAVDTWAVGCIFAELLTLKPLFQGQEVKGTPNPFQLDQLDKIFKVLGHPTLDKWPTLANLPHWQQDLQHIQGHKYDNVGLYNVVHLSPKSPAYDLLSKMLEYDPRKRITAAQALEHEYFRLEPLPGYNTLVPIQPGEKVINYPTRPVDTTTDFEGTTNIQPSQTVTSGNAVNMQGAHAVNRSVSRPMAGVGMQRIPPQSMAAYNLASQAGMGMNPGGSMNPGGIPMQRGVSAQAHQQQQLRRKDQGMGMPGYPPQQKQQRRY | 491 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 45185773 | 45203082 | + | Hsped.04g02410.1 | Hepe04g0241 | 567379 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe04g0241 | 491 | SMART | serkin_6 | 37 | 348 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe04g0241 | 491 | FunFam | Cyclin-dependent kinase e-1 | 25 | 121 | - | - | |
Hepe04g0241 | 491 | Gene3D | Phosphorylase Kinase; domain 1 | 20 | 119 | - | - | |
Hepe04g0241 | 491 | CDD | STKc_CDK8_like | 36 | 348 | - | - | |
Hepe04g0241 | 491 | Gene3D | Transferase(Phosphotransferase) domain 1 | 120 | 359 | - | - | |
Hepe04g0241 | 491 | ProSitePatterns | Protein kinases ATP-binding region signature. | 43 | 71 | IPR017441 | GO:0005524(InterPro) | |
Hepe04g0241 | 491 | SUPERFAMILY | Protein kinase-like (PK-like) | 31 | 349 | IPR011009 | - | |
Hepe04g0241 | 491 | ProSiteProfiles | Protein kinase domain profile. | 37 | 348 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe04g0241 | 491 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 165 | 177 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe04g0241 | 491 | PANTHER | CELL DIVISION PROTEIN KINASE | 36 | 348 | IPR050108 | GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0016592(PANTHER) | |
Hepe04g0241 | 491 | FunFam | Putative cyclin-dependent kinase E-1 | 122 | 361 | - | - | |
Hepe04g0241 | 491 | MobiDBLite | consensus disorder prediction | 444 | 491 | - | - | |
Hepe04g0241 | 491 | Pfam | Protein kinase domain | 37 | 348 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe04g0241 | Hepe-Chr4:45185773 | Hepe10g1534 | Hepe-Chr10:52091184 | 2.07e-72 | dispersed | |
Hepe01g0154 | Hepe-Chr1:26638225 | Hepe04g0241 | Hepe-Chr4:45185773 | 8.79e-48 | wgd | |
Hepe04g0241 | Hepe-Chr4:45185773 | Hepe04g0381 | Hepe-Chr4:52457355 | 1.21e-17 | wgd | |
Hepe04g0241 | Hepe-Chr4:45185773 | Hepe06g0383 | Hepe-Chr6:14344402 | 1.27e-54 | wgd | |
Hepe04g0241 | Hepe-Chr4:45185773 | Hepe07g1035 | Hepe-Chr7:14915394 | 2.30e-51 | wgd | |
Hepe04g0241 | Hepe-Chr4:45185773 | Hepe07g1598 | Hepe-Chr7:55767256 | 1.83e-46 | wgd | |
Hepe04g0241 | Hepe-Chr4:45185773 | Hepe09g1602 | Hepe-Chr9:46187710 | 1.64e-47 | wgd | |
Hepe04g0241 | Hepe-Chr4:45185773 | HepeContig66g0067 | Hepe-ChrContig66:5589760 | 4.60e-18 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
72701 | PF00069 | Pkinase | 3.10E-67 | CL0016 | Hepe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe04g0241 | K02208 | - | csv:101203984 | 901.738 |