Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe04g0285 ATGGCGATGCTCCACGGACTTCAGATGGCTGAACGCAATGACATATCTTGTTTGTATGTTGAATCAGATGCCCAACATTTAGTCAAAACAATAAATTCAAGTGAGTTGATGTCTTCTCCACAAGGGGCCATCATCCATGAGATTCGAACGACTCTTCTCAAGTGTAATGAATCGACCCTTTTGACCTTCAAATCTTCCATCAAAGATTCAACAAACTCTCTCTCGAACTGGGTTTCTTCTTCTCCGACCCATTTCTGTAATTGGACTGGGATTTCTTGTGTCAACGTATCTTCTTCTTCTTCGCTTTCGCTTTCGGTTTCCGCCATTGATCTTCAGGGTTTGAATCTCTCTGGTGAAATTTCGTCTTCCATTTGTGAACTCCCTCGTTTGGCCCATCTTAACCTTGCCGATAATCGCTTCAATCAGCCCATTCCTCTTCATCTCTCGCAGTGCAGCTCGTTGGAGACTTTGAATCTGAGCAATAATATGATCTGGGGCACCATTCCAGATCAGATTTCTCTGTTTGGTTCTTTGCGAGTGCTTGATTTTGGGAAGAATCATATTGAAGGGAAGATTCCTGACGGGATTGGGGCTTTGAAGAATCTTCAAATTCTGAATCTGAGAAGCAATTTGATTTCTGGTAGAGTTCCTTCTGTTGTCTTTCATAATCTTACTCAACTTCTTGTTGTTGATTTGTCTGAAAATGCTTATCTTTTGAGTGATATTCCTAGTGAGATTGGGAAGCTTGAGAAACTTGAGGAGCTATGGCTTCAAACCTCTGGTTTCTATGGTGAAATTCCTTTTTCTTTGATGGGTTTGAGAAGTTTGACTGTTTTGGATCTTTCTCAGAACAATCTCACTGGGAAAATCCCTGAAATGTTGGGTTCTTCTTTGAAGAATTTGGTGTACTTTGATGTTTCTGAGAATAAGCTTGTGGGGTCTTTCCCAAATGGGGTTTGTAGTGGAAAAGGGCTTGTGAGTCTTAGTCTTCATACCAATTTTTTCACTGGGATTTTGCCTAATTCCTTGAATCAGTGCTTGAATCTTGAGAGGTTTCAAGTTCAGAACAATGGGTTTTCAGGGGATTTTCCCAAATCCTTGTGGTCATTGCCTAAGATTAAGCTCATTAGAGCTGAAAACAATGGTTTCTCTGGTGAAGTTCCTGAGTCTATATCAATGGCTGCTCAGCTTGAGCAAGTTCAGCTTGATAACAACAGTTTTTCGAGTAAGATACCCTGGGGTCTTGGGTCGATTCGGAGCTTATACCGATTCTCTGCGTCGCTCAATCACTTTTATGGTGAATTGCCACCGAACTTCTGTGATTCGCCGTTGATGAGTATAATTAATCTGTCTCACAATTCTCTTTCGGGACGGATTCCCGAGCCCAAAAACTGCAAGAAACTGGTGTATTTGTCCTTGGCAGGCAATAGTCTTACTGGAGAAATTCCTACTTCCCTTGCAGATCTACCTGTGTTAACTTATCTTGATCTTTCTGATAACAATCTCACTGGTTCGATACCTCAAGGACTCGAAAACTTGAAGCTAGCGCTCTTTAACGTTTCGTTCAATCGATTATCGGGCGCTGTTCCGTTCTCTTTGATTTCAGGGCTACCGGCTTCGTTTCTTCAAGGAAATCCTGATCTTTGTGGCCCTGGTTTGCAGACTCCTTGTTCTCAAGGCCATCCGATAAACCATATGTCTGGACTTAACAAAATGACATGCGCACTCATATCTATAGCTTGTGTTCTAGGAGTTATGAGCTTAGCTGCCGGGTTCTTTCTGTATTACCGATCCTACAAGCCGAAATCTCGAGTCGATAACTGGCATTCGGTTTACTTCTACCCTCTTAGAATCAGTGAACATGAGTTGATCATGGGGATGAATGAGAAAACTGCACAAGGATGTGGGGGACCGTTTGGCCAAGTGTTCATTTTAAGCTTACCGAGCCGTGAACTGATCGCCGTAAAGAAACTGGTTAACTTCGGGAGTCGTTCGTGGAAGTCGTTGAAAGCCGAGGTCAAGACATTGGCCAAGATCAGGCACAAGAACATCATAAAAATTCTGGGGTTTTGCTATTCTGATGATGCCATTTTTCTGATTTATGAATTCTTACACAAAGGAAGCTTGGCTGACTTGATATGCAGAAATGACTCTTGTCTGAATTGGAATGTGAGACTGAGAATTGCCATTGAGGTTGCTCAAGGACTAACTTACATTCAAAAGGACCATGTCCCTCATTTACTTCATCGAAACGTTAAATCGTCAAACATTCTATTGGACGCCGACTTTGTCCCAAAGCTCACGGATTTTGCTCTTCACCATATCGTTGGAGAGTCAGCATTTCACTCGACAGTGGCTTCGGAATCTGCTCATTCCTGCTATATTGCACCAGAATATAAATACAACAAAAAGGCAACAGAGCAAATGGATGTGTACAGCTTTGGTGTAGTGTTGCTAGAACTGGTGACTGGTAGACAAGCCGAGCGATCGGAATCAACGGACTCTCTCGACGTCGTCCAGTGGGTGAGAAGGAAGGTGAACATAGCCAATGGAGCTTCCCAAGTCCTGGACCCGAGCGTCTTGGAGCATTCTCAACGACAAATGCTGGAAGCTCTAGACATTGCCCTCCAATGCACTTCTATGATGCCTGAAAAACGACCGTCGATGCTCGAAGTCGCCAAGGCGCTGCAACTGATCGGCTTGACTATGAACCTCCACGACGCAGCCTTCTCGGCTGCAGAGGATGGAAACTTTTTGATTAGGAGATTGCAATGTTTGGGACATGGTATTTCTGAGTGTGCTCAACAATCAATGGAATCTCCGAATGTGGATCTCCCTACCACGGACAAAGAAATCATACCGGAGAAGATTGAGGATGAAGAGATCAAAGAGCCTTCGTTTCATTGCGAGCTTTGCGATGCCGAAATTGTTCACAAACTCGCTCAGGTTCTCCTTCCTGGGTTGTCCACCGCATGCGTCGATAACACCAGTGGCGACATCTTTCGAACCCCTGGTTCTGTCGCTGCCGATATGAGGAAGGAAATGGTCGATTATCTTACCATGAGGAGCGAAACTTGTGTTGCCGAATCTGTAATTTTAGACAATGTTACCGATACCGAGGTATCTGATCATCCTTACGATATTATCTCTGATTTTGTTGATGATTTTGTTGCTACCAAGAGAAATTTGTTTAGTAGAGTTTCTGGATGGGTTCTCAGTGAGAAAAGAGAGGATAAGATAGATGATTTTGTTCAGGAAATGGACGTTAATGGTTTTTGGCCACTTGATAGGAGAGCAGTACTTTGCCAAATTTTGCTTAAGAATGTTGATTTTAAGAGTGAGTTTCATTGTGACAAGAAATATCACTCTGTACAAGAACTAGCTGAGCATGTTGAAAACTGTGGGTTTAGGTCCTTAACCTGCTCAAATGAAGGCTGCACTGCTAGATTTTGTGCAACCCATGCAGAACAGCATGATTTAATCTGCCCCTTCAAGATTATTTCATGTGAACAGAAGTGTTCTACCTTTATCATGAGACGCGAAATGGACCGCCATTGCATAACTGTTTGTCCTATGAAGCTTGTCAACTGCCCCTTCTATAATATGGGTTGTCAATCCCCTGTTCCTTACTCTTTGATATTGGAGCATTGTGTAGAGACTTTTGATTCTCATTTGCTGCACATTCTTCACACTGTACACAAGGAAGCAAATGAAGAGACTCTTGTACATAGACGCCAACAGCTTCAAGAGGCATCATCACTTGACCACCTTAGAGGGCTTCAAAACCTGAGACTGTTAATCTTGAAAATCAAAGAATTTGACTCTAAGTTAGGACCATTAGTAGTCATCTCCAAGAAAGAGGAGACGGAAGAAGCGAAGGATTCTTCTGACGAAAGTGAAGGAGAGAAGGATGCCTCTAATGCAACCGAAGAAAAGAAGGGCGTATCTAATATAACAGAAGAAACGAAGGATGCCTCTACTGCAACTGAAGAAAGGAAGGATGTGTCTAGTGCAATTCAAGAGATGGATGTCATGTCTAGTGCAATTGAAGTAATGGATGTCATGTCTAGTGCAGTTGAAGTAATGAAGGACGCTTCTAATGAAAAAGAAGAAATGGAGAAGGATACTTCTGATGTGAAGGAAGAAAAGAAGGATGGTTCTGATTCAGAGGAAGAAAAGAAAACTGCTTCTGATGTAAAGGAAGAAACGAAGGCTGGTTCTGATTCAGAGGAAGAAATGAAGAATGCTTCTAATGTAAAGGAAGAAGAAAAGAAGGATGGTTCTGATTCAGAGGAAGAAATTAAGACTGCTTCTGATGAAAAGGAAGAAGAAAAGAAGGATGGTTCTGATTCAGAGGAAGAAACGAAGAATGCTTCTGATGTACAGGAAGAAGAAAAGAAGGATGGTTCTGATTCGGAGGAAGAAAGGAAGAATGCTTATGATGTAAAGGAAGAAGAAACGAAGGATGGTTCTGATTCGGAGGAAGAAACGAAGAATGTTTCTGATGTACAGGAAGAAGAAAGGAAGGATTCTTCTGATTCAGGGGAAGAAATGGAAGAAGTGAAGTACGCCCCGAAAGAAACTGAAGAAAGCGAAGATGCTTCGGACCCTCCCAATGTAAATGAAGAAATAAAGGTTACTTCAAATCTAGTAAGAAATGATTCAGATGAAGAAGAAGGTGCAAGATAA 4689 42.27 MAMLHGLQMAERNDISCLYVESDAQHLVKTINSSELMSSPQGAIIHEIRTTLLKCNESTLLTFKSSIKDSTNSLSNWVSSSPTHFCNWTGISCVNVSSSSSLSLSVSAIDLQGLNLSGEISSSICELPRLAHLNLADNRFNQPIPLHLSQCSSLETLNLSNNMIWGTIPDQISLFGSLRVLDFGKNHIEGKIPDGIGALKNLQILNLRSNLISGRVPSVVFHNLTQLLVVDLSENAYLLSDIPSEIGKLEKLEELWLQTSGFYGEIPFSLMGLRSLTVLDLSQNNLTGKIPEMLGSSLKNLVYFDVSENKLVGSFPNGVCSGKGLVSLSLHTNFFTGILPNSLNQCLNLERFQVQNNGFSGDFPKSLWSLPKIKLIRAENNGFSGEVPESISMAAQLEQVQLDNNSFSSKIPWGLGSIRSLYRFSASLNHFYGELPPNFCDSPLMSIINLSHNSLSGRIPEPKNCKKLVYLSLAGNSLTGEIPTSLADLPVLTYLDLSDNNLTGSIPQGLENLKLALFNVSFNRLSGAVPFSLISGLPASFLQGNPDLCGPGLQTPCSQGHPINHMSGLNKMTCALISIACVLGVMSLAAGFFLYYRSYKPKSRVDNWHSVYFYPLRISEHELIMGMNEKTAQGCGGPFGQVFILSLPSRELIAVKKLVNFGSRSWKSLKAEVKTLAKIRHKNIIKILGFCYSDDAIFLIYEFLHKGSLADLICRNDSCLNWNVRLRIAIEVAQGLTYIQKDHVPHLLHRNVKSSNILLDADFVPKLTDFALHHIVGESAFHSTVASESAHSCYIAPEYKYNKKATEQMDVYSFGVVLLELVTGRQAERSESTDSLDVVQWVRRKVNIANGASQVLDPSVLEHSQRQMLEALDIALQCTSMMPEKRPSMLEVAKALQLIGLTMNLHDAAFSAAEDGNFLIRRLQCLGHGISECAQQSMESPNVDLPTTDKEIIPEKIEDEEIKEPSFHCELCDAEIVHKLAQVLLPGLSTACVDNTSGDIFRTPGSVAADMRKEMVDYLTMRSETCVAESVILDNVTDTEVSDHPYDIISDFVDDFVATKRNLFSRVSGWVLSEKREDKIDDFVQEMDVNGFWPLDRRAVLCQILLKNVDFKSEFHCDKKYHSVQELAEHVENCGFRSLTCSNEGCTARFCATHAEQHDLICPFKIISCEQKCSTFIMRREMDRHCITVCPMKLVNCPFYNMGCQSPVPYSLILEHCVETFDSHLLHILHTVHKEANEETLVHRRQQLQEASSLDHLRGLQNLRLLILKIKEFDSKLGPLVVISKKEETEEAKDSSDESEGEKDASNATEEKKGVSNITEETKDASTATEERKDVSSAIQEMDVMSSAIEVMDVMSSAVEVMKDASNEKEEMEKDTSDVKEEKKDGSDSEEEKKTASDVKEETKAGSDSEEEMKNASNVKEEEKKDGSDSEEEIKTASDEKEEEKKDGSDSEEETKNASDVQEEEKKDGSDSEEERKNAYDVKEEETKDGSDSEEETKNVSDVQEEERKDSSDSGEEMEEVKYAPKETEESEDASDPPNVNEEIKVTSNLVRNDSDEEEGAR 1562
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 48007645 48024055 + Hsped.04g02850.1 Hepe04g0285 567423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe04g0285 1562 MobiDBLite consensus disorder prediction 1360 1562 - -
Hepe04g0285 1562 ProSiteProfiles Leucine-rich repeat profile. 491 514 IPR001611 GO:0005515(InterPro)
Hepe04g0285 1562 ProSiteProfiles Zinc finger TRAF-type profile. 1153 1209 IPR001293 GO:0008270(InterPro)
Hepe04g0285 1562 Pfam TRAF-type zinc finger 1158 1211 IPR001293 GO:0008270(InterPro)
Hepe04g0285 1562 MobiDBLite consensus disorder prediction 1287 1338 - -
Hepe04g0285 1562 Gene3D Phosphorylase Kinase; domain 1 635 704 - -
Hepe04g0285 1562 Coils Coil 1355 1385 - -
Hepe04g0285 1562 Gene3D Ribonuclease Inhibitor 321 433 IPR032675 -
Hepe04g0285 1562 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 100 897 IPR050647 -
Hepe04g0285 1562 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 704 903 - -
Hepe04g0285 1562 MobiDBLite consensus disorder prediction 1287 1339 - -
Hepe04g0285 1562 SUPERFAMILY Protein kinase-like (PK-like) 637 904 IPR011009 -
Hepe04g0285 1562 SUPERFAMILY L domain-like 238 549 - -
Hepe04g0285 1562 FunFam Leucine-rich repeat family protein 55 217 - -
Hepe04g0285 1562 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1157 1221 IPR013083 -
Hepe04g0285 1562 Pfam Protein tyrosine and serine/threonine kinase 637 895 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe04g0285 1562 Coils Coil 1420 1454 - -
Hepe04g0285 1562 ProSiteProfiles Protein kinase domain profile. 628 899 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe04g0285 1562 SUPERFAMILY L domain-like 58 320 - -
Hepe04g0285 1562 ProSiteProfiles Leucine-rich repeat profile. 275 297 IPR001611 GO:0005515(InterPro)
Hepe04g0285 1562 Pfam Leucine rich repeat N-terminal domain 58 93 IPR013210 -
Hepe04g0285 1562 FunFam probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 618 703 - -
Hepe04g0285 1562 ProSiteProfiles Leucine-rich repeat profile. 153 175 IPR001611 GO:0005515(InterPro)
Hepe04g0285 1562 SMART LRR_typ_2 152 175 IPR003591 -
Hepe04g0285 1562 SMART LRR_typ_2 298 322 IPR003591 -
Hepe04g0285 1562 SMART LRR_typ_2 199 223 IPR003591 -
Hepe04g0285 1562 SMART LRR_typ_2 224 249 IPR003591 -
Hepe04g0285 1562 SMART LRR_typ_2 127 151 IPR003591 -
Hepe04g0285 1562 SMART LRR_typ_2 489 513 IPR003591 -
Hepe04g0285 1562 SMART LRR_typ_2 273 297 IPR003591 -
Hepe04g0285 1562 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 297 560 - -
Hepe04g0285 1562 Gene3D Transferase(Phosphotransferase) domain 1 705 911 - -
Hepe04g0285 1562 Gene3D Ribonuclease Inhibitor 54 219 IPR032675 -
Hepe04g0285 1562 MobiDBLite consensus disorder prediction 1363 1533 - -
Hepe04g0285 1562 Pfam Leucine Rich Repeat 275 296 IPR001611 GO:0005515(InterPro)
Hepe04g0285 1562 Pfam Leucine Rich Repeat 153 173 IPR001611 GO:0005515(InterPro)
Hepe04g0285 1562 Pfam Leucine Rich Repeat 177 199 IPR001611 GO:0005515(InterPro)
Hepe04g0285 1562 Pfam Leucine Rich Repeat 467 489 IPR001611 GO:0005515(InterPro)
Hepe04g0285 1562 Pfam Leucine Rich Repeat 492 513 IPR001611 GO:0005515(InterPro)
Hepe04g0285 1562 Gene3D Ribonuclease Inhibitor 434 558 IPR032675 -
Hepe04g0285 1562 Gene3D Ribonuclease Inhibitor 220 320 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g0285 Hepe-Chr4:48007645 Hepe04g0325 Hepe-Chr4:49899240 0.0 dispersed
Hepe04g0326 Hepe-Chr4:49926362 Hepe04g0285 Hepe-Chr4:48007645 4.80e-251 transposed
Hepe01g0190 Hepe-Chr1:30929819 Hepe04g0285 Hepe-Chr4:48007645 3.73e-41 wgd
Hepe02g2209 Hepe-Chr2:62428442 Hepe04g0285 Hepe-Chr4:48007645 4.34e-39 wgd
Hepe04g0285 Hepe-Chr4:48007645 Hepe07g1016 Hepe-Chr7:14323610 4.73e-44 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72703 PF07714 PK_Tyr_Ser-Thr 4.10E-37 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe04g0285 - - - 0.0