Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe04g0308 | ATGGCTGACCCATGTTCCAACTCATTACCAAGTGTTCTAAAATTCAACTCCCTCCACCACCATTTTCCACCCTCACAATCTTCAATCCGTCCTCCACAGGTGAATATGTCTCCCAATTGTTTCTCTTATCCCTACCCGACACCACCTCCACCGCCGTCTCCGCCGCTCCGAGAGGCTCTGCCACTTCTCGGGCTGATGTCTCCACCCGAGCAGCGGCGGGAGCAAGAGGAAGAAGACGACGGCGGAGGCGGCAGAGGGGACGACGAGTCGGTAACCGTGGCACTCCACATAGGGCTACCGAGCCCTAGCGCGGCCGAGATAGCTTCTGTGATGTGTGGGTCTTCATCTGAAATTGATCATGTTGGTGATGGTGATCATAGTAGTAACAATAATAATAACCATGATCATGATTTTGGGCAGTCCACCAAAACCCTAATAAAGGGGCAGTACTGGATCCCTACTCCTTCTCAAATCCTCATTGGTCCAACCCAATTCTCTTGCCCTGTTTGCTTCAAAACCTTCAATAGATACAACAATATGCAGATGCACATGTGGGGGCATGGCTCTCAGTACAGAAAAGGCCCCGAATCACTCCGGGGCACGCAGCCAACGGGCATGCTACGGCTTCCTTGCTACTGCTGCGCACCGGGGTGCCGCAACAACATCGACCATCCCCGGGCCAAGCCGCTCAAGGACTTCAGAACACTGCAAACACACTACAAGCGCAAGCACGGTCTGAAGCCCTTCATGTGCCGCAAGTGCGGCAAGGCGTTCGCCGTGCGCGGGGACTGGCGGACACATGAGAAGAATTGTGGCAAGCTTTGGTACTGCATTTGTGGCTCTGATTTCAAGCACAAGCGTTCCCTCAAGGACCATGTCAAGGCCTTCGGTAACGACCATGCCGCGTACGGCGGTGGTGGGATCGACGGGTTTGGAGATGAAGAGGATGAGCCTGCTTCTGAAGTCGAACAAGATAACGATGAGTGA | 987 | 53.9 | MADPCSNSLPSVLKFNSLHHHFPPSQSSIRPPQVNMSPNCFSYPYPTPPPPPSPPLREALPLLGLMSPPEQRREQEEEDDGGGGRGDDESVTVALHIGLPSPSAAEIASVMCGSSSEIDHVGDGDHSSNNNNNHDHDFGQSTKTLIKGQYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTGMLRLPCYCCAPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGLKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHVKAFGNDHAAYGGGGIDGFGDEEDEPASEVEQDNDE | 328 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 48818921 | 48821682 | + | Hsped.04g03080.1 | Hepe04g0308 | 567446 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe04g0308 | 328 | MobiDBLite | consensus disorder prediction | 306 | 328 | - | - | |
Hepe04g0308 | 328 | FunFam | zinc finger protein WIP2-like | 164 | 187 | - | - | |
Hepe04g0308 | 328 | MobiDBLite | consensus disorder prediction | 116 | 137 | - | - | |
Hepe04g0308 | 328 | MobiDBLite | consensus disorder prediction | 23 | 89 | - | - | |
Hepe04g0308 | 328 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 167 | 187 | IPR013087 | - | |
Hepe04g0308 | 328 | MobiDBLite | consensus disorder prediction | 42 | 58 | - | - | |
Hepe04g0308 | 328 | SMART | c2h2final6 | 165 | 187 | IPR013087 | - | |
Hepe04g0308 | 328 | SMART | c2h2final6 | 249 | 269 | IPR013087 | - | |
Hepe04g0308 | 328 | FunFam | Zinc finger protein WIP2 | 218 | 300 | - | - | |
Hepe04g0308 | 328 | Pfam | Zinc finger, C2H2 type | 165 | 184 | IPR013087 | - | |
Hepe04g0308 | 328 | MobiDBLite | consensus disorder prediction | 310 | 328 | - | - | |
Hepe04g0308 | 328 | SUPERFAMILY | beta-beta-alpha zinc fingers | 234 | 269 | IPR036236 | - | |
Hepe04g0308 | 328 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 165 | 192 | IPR013087 | - | |
Hepe04g0308 | 328 | PANTHER | ZINC FINGER PROTEIN WIP2 | 36 | 326 | IPR043584 | GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0010468(PANTHER)|GO:0010468(InterPro)|GO:0048856(PANTHER) | |
Hepe04g0308 | 328 | MobiDBLite | consensus disorder prediction | 23 | 41 | - | - | |
Hepe04g0308 | 328 | SUPERFAMILY | beta-beta-alpha zinc fingers | 161 | 187 | IPR036236 | - | |
Hepe04g0308 | 328 | Gene3D | Classic Zinc Finger | 164 | 187 | - | - | |
Hepe04g0308 | 328 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 249 | 269 | IPR013087 | - | |
Hepe04g0308 | 328 | Gene3D | Classic Zinc Finger | 212 | 302 | - | - | |
Hepe04g0308 | 328 | Pfam | BIRD-IDD transcription factor, third C2HC zinc finger | 248 | 272 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe04g0273 | Hepe-Chr4:46967259 | Hepe04g0308 | Hepe-Chr4:48818921 | 1.42e-227 | dispersed | |
Hepe04g0308 | Hepe-Chr4:48818921 | Hepe05g0565 | Hepe-Chr5:7947960 | 5.45e-133 | dispersed | |
Hepe02g2725 | Hepe-Chr2:75570150 | Hepe04g0308 | Hepe-Chr4:48818921 | 9.84e-108 | transposed | |
Hepe10g0981 | Hepe-Chr10:36769382 | Hepe04g0308 | Hepe-Chr4:48818921 | 1.65e-104 | wgd | |
Hepe04g0308 | Hepe-Chr4:48818921 | HepeContig66g0154 | Hepe-ChrContig66:13039420 | 6.98e-105 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
55354 | None | None | None | None | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe04g0308 | - | - | - | 0.0 |