Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe04g0374 ATGGGCAAGAACCGTGTAGTAGAAAATTGGAAGTTTGTGAAACAAGTTGTTGAAGGACGATGGTTTTCGGTATTTGCCTCATTTTTTATCATGATTGGTTGCGGTTCAACTTACTTGTTTGGAACATACTCCAAAGTGATAAAGACCAAATTTGATTACAATCAAACTCAAGTTACCACCTTGGGATTCGCCAAAGATTTGGGCTCCAACCTTGGAGTGTTTGCTGGACTTCTAGCTGAGGTGGCTCCACCATGGGTGTTGTTCCTTGTGGGATCATCCTTCAACTTTGTCAGTTACTTCATGATCTGGCTCTCCGTTGCGGGCTTCATCCCAAAACCTCAATTCTGGCTAATGTTCGTTTACATTTGTATGTCTGCTAATTCACAAAATTTCGCCAACACTGCTGTTATGGTCATCAACGTTAAAAACTTCCCTGACCGACGAGGCATCATTTTGGGGCTTCTTAAGGGCTTTGTTGGCCTTGGTGGCGCCGTTCTGACTCAGATCTATTTAGCAATTTACGACAACCAAAATCCTACTGATCTTCTCCTCTTTCTTTCGTGGCTACCCTCCATTATATCTCTTATATTTTTTCTTTCAATTCGAACAATCAAAGCTCAAAAGCATCCCCAGGCACTCAAGGTGTTCTACCACTTGCTTTTCGTGTCCATAACAATGGCGGTGTTCATCTTTTTTCTAACCATAACCCAAAGACAAATTGTTTTCTCTCACACTGGATATGTCGGTGGTGTCGTCGTCATCGTAGTCTTTCTGTGCCTACCCCTTTTGATCGCAATTAAAGAAGAATTGTTTCTCTTCAAACTCAACAAGCAAACTATGGATCCTTTCGTCGTCGTTTTAATCCCCGAAGATGTGAAACCGAAGGATAAGGAAATTTTAGAAACTTCTTCACCATGTTCAACAAATGTGTGTAACAAGCCGCAAAGAGGGGAAAATTTTAACATCTTGCAAGCTCTCCTTAGCAAAGACATGGCTCTTGTTTTTTTAGCTACGGTTTCTGCTTGTGGGTCATCTATTACAGCCATTGACAATATTGGGCAGATCGCCGAGTCACTTAACTACCCAGCTCATTCCATAAGCATTTTCATTTCATGGATTTCCATTTCCAATTTCTTTGGTCGAGTCTTCTCCGGGTTCATCTCTGAAATATTTATGACCAAATACCAATTACCTCGTCCTTTGATGTTCGGCTTTGCCCAGCTCCTTACCTGTACCGGTCTACTCTCCATCGCCTTCCCCTATAAAAATTCAGTCTACGTTGCTTCACTTATAATTGGGTTTGGCTTTGGAGCCCAAACTCCAATGTTATTCACCATAATCTCTGATCTCTTTGGCCTCAAACATTACTCAACGTTGCTCAATTGTGGGCAACTCGCAGTCCCATTTGGATCTTACGTACTAAACGTGCATGTAGTAGGAAAGTTGTACGACGATGAAGCCACTAAAATTGGTAGTGTGAAGAACGGCAAAGGCCTTACTTGCACTGGATCTCATTGCTTTAGCGAGTCTTTCACAATTTTGGTTGCAGTTACTTTATTTGGAGCGATGGCTTCGTTTGCACTGGCCTATAGAACTCGAGACTTCTACAAAGGTGATATATACATGAAATATAGAGACGACATGTGGACTACACAATCGGACATAGAATTGTATTCTTCCGATGATAAGAAGAAAAATGAACTCAAAAAGAGAGATGACGATGGAAGCAAATAA 1734 41.41 MGKNRVVENWKFVKQVVEGRWFSVFASFFIMIGCGSTYLFGTYSKVIKTKFDYNQTQVTTLGFAKDLGSNLGVFAGLLAEVAPPWVLFLVGSSFNFVSYFMIWLSVAGFIPKPQFWLMFVYICMSANSQNFANTAVMVINVKNFPDRRGIILGLLKGFVGLGGAVLTQIYLAIYDNQNPTDLLLFLSWLPSIISLIFFLSIRTIKAQKHPQALKVFYHLLFVSITMAVFIFFLTITQRQIVFSHTGYVGGVVVIVVFLCLPLLIAIKEELFLFKLNKQTMDPFVVVLIPEDVKPKDKEILETSSPCSTNVCNKPQRGENFNILQALLSKDMALVFLATVSACGSSITAIDNIGQIAESLNYPAHSISIFISWISISNFFGRVFSGFISEIFMTKYQLPRPLMFGFAQLLTCTGLLSIAFPYKNSVYVASLIIGFGFGAQTPMLFTIISDLFGLKHYSTLLNCGQLAVPFGSYVLNVHVVGKLYDDEATKIGSVKNGKGLTCTGSHCFSESFTILVAVTLFGAMASFALAYRTRDFYKGDIYMKYRDDMWTTQSDIELYSSDDKKKNELKKRDDDGSK 577
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 52115008 52116741 - Hsped.04g03740.1 Hepe04g0374 567512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe04g0374 577 SUPERFAMILY MFS general substrate transporter 8 207 IPR036259 -
Hepe04g0374 577 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 34 - -
Hepe04g0374 577 Gene3D MFS general substrate transporter like domains 330 535 IPR036259 -
Hepe04g0374 577 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 19 540 - GO:0016020(PANTHER)
Hepe04g0374 577 SUPERFAMILY MFS general substrate transporter 224 534 IPR036259 -
Hepe04g0374 577 Pfam Nodulin-like 20 266 IPR010658 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g0374 Hepe-Chr4:52115008 Hepe09g1222 Hepe-Chr9:15572464 7.27e-278 dispersed
Hepe04g0374 Hepe-Chr4:52115008 Hepe04g0375 Hepe-Chr4:52177264 4.23e-290 tandem
Hepe04g0374 Hepe-Chr4:52115008 HepeContig66g0221 Hepe-ChrContig66:17686898 1.01e-257 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe04g0374 - - - 0.0