Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe04g0384 ATGAATATTATTGAGGATTTGTCTAATGTACATGCCCTCACACAACGACATATTGAGGTGGAATCAGATTGCTTGGAGGATCGAGCAGGATCCTCGAGTGGACCAGCAGCTATGGAGCCCGCCGATGATATTTCTGGGAAATCGTCCAAACATCCGATTGGGGCCGGCCAGGTTTGTCAGATCTGCAGCGATTCCATCGGCACGACGGCTGACGGCGACCCCTTTGTTGCGTGTGATGTTTGTGCATTTCCGGTTTGCCGTCCTTGTTACGAGTACGAGAGGAAAGACGGGAATCAGTCTTGCCCTCAATGCAAGACCAAATACAAATGGCATAAAGGAAGTCCTCCGGTTAATGGAGAGGCTGTGGAAGATGAGGATGTTAATGGAGTAGCAGCGGCACAAGAAAGACACCATAAGTTACCTGAGCGAACTCTTAGCTGGGATACTAATTATGATAAGGAGGGATCTTTTAATCACATTCCTTTGCTCACTGCTGGACGATCTGTTTCGGGAGAACTGTCGGCTGCATCCCCGGAGCGGCTCTCCATGGCGTCTCCTGAAAGTGGGAGCAGGGCTAACTATAGAATCATGGATCAATCGAGAGATTCGGGATCAGCTAGATTTGGCAATGTGGCCTGGAAAGAGAGAATAGATAGTTGGAAGGTGAAGCAGGACAAGAGTGTGCCGCCAATGAGTGTCAGTCATGCACCTTCTGAAGGAAGGGGTGGTGCAGATTTTGACGCGAGCACTGATGTCGTGATCGATGATTCGTTACTAAATGATGAAGCCCGCCAGCCTCTTTCGAGGAAGGTTTCTATTCCATCCTCTAGGATTAACCCTTATAGGATGGTCATAGTTCTGCGACTTGTTATTCTTTGCATCTTCTTGCACTACCGGATTACAAATCCAGTTCCCAATGCCTTTGCTCTGTGGTTAATATCAGTGATTTGTGAGATATGGTTTGCTGTATCTTGGATTTTGGATCAGTTCCCCAAATGGCTCCCGGTCAATCGTGAGACATATCTTGATAGGCTTGCTCTACGATATGATCGTGAAGGAGAGCCATCTCAGTTGGCTGCTGTCGACATATTTGTCAGTACTGTCGACCCTCTGAAAGAACCTCCCCTTGTCACAGCCAATACAGTCCTATCAATTCTCGCTGTGGACTATCCTGTCGATAAAGTTTCTTGCTATGTATCAGATGATGGAGCTGCTATGTTATCATTCGAAGCATTGTCCGAAACATCCGAATTTGCAAGAAAATGGGTTCCTTTCTGCAAGAAGTTCAGCATTGAGCCACGAGCACCGGAGTGGTATTTTGCTCAGAAGATTGATTACTTAAAGGACAAGGTTCAACCATCATTTGTGAAGGAGCGGCGAGCAATGAAGAGAGAATACGAGGAGTTCAAAATTCGTGTCAATGGACTTGTTGCTAAGGCACAGAAAATTCCTGATGAAGGGTGGGTCATGCAAGATGGTACACCATGGCCTGGAAATAACACCAGAGATCATCCAGGAATGATTCAGGTTTTCTTAGGGCACAGTGGAGGACTTGATACTGACGGTCATGAGCTTCCACGTTTAGTTTATGTTTCTCGTGAGAAGCGTCCTGGTTTCCAACATCACAAAAAGGCTGGTGCTATGAATGCACTTGTTCGCGTATCTGCTGTTCTTACCAATGGACCCTTCATGTTAAATCTTGATTGTGATCATTACATAAACAACAGTAAAGCGTTACGGGAAGCTATGTGTTTTCTGATGGATCCTAATCTTGGAAAATCAGTGTGCTATGTTCAGTTTCCCCAGAGGTTTGACGGGATTGATAGAAATGATCGATACGCCAATCGTAACACTGTTTTCTTTGATATCAATCTTCGAGGCTTGGATGGCATCCAAGGTCCGGTTTATGTGGGAACAGGATGTGTTTTCAATCGAACTGCATTGTATGGCTATGAACCCCCTCTCAAGCCCAAGCATAAAAAATCAGGGTTCTTCTCCAGTTGCTTTGGGAAATCAAAAAAGAAAAGTTCTAAATCGAAAAGGAAGGACTCTGATAAGAAGCAAGCAAATAAAAATGTCGATCCCACCGTGCCAATATTCAACCTTGAGGATATTGAGGAAGGAGTTGAAGGTGCCGGGTTTGACGACGAGAAATCACTACTAATGTCACAAATGAGCCTGGAGAAGAGGTTTGGTCAATCAGCTGTATTCGTTGCTTCCACACTAATGGAGAATGGTGGCGTGCCGCAGTCTGCCACTCCGGAATCTCTCCTTAAAGAAGCAATTCATGTCATCAGTTGCGGATACGAAGACAAAACAGACTGGGGAAGTGAAATTGGATGGATCTATGGTTCTGTCACAGAGGATATTTTGACAGGGTTCAAGATGCATGCCCGTGGTTGGAGATCAATCTATTGCATACCAGACCGTCCTGCATTTAAAGGATCTGCTCCCATTAATCTTTCTGATCGTCTTAACCAAGTGCTTCGGTGGGCGTTAGGTTCGGTTGAAATTCTTTTCAGTCGGCATTGCCCTATGTGGTACGGTTATGGTGGACGGTTGAAATGGCTCGAGAGATTTGCTTATATTAACACCACCATTTACCCAATAACATCCATTCCTCTTCTTGCCTATTGTACCTTACCTGCAATATGTCTGCTCACTGGAAAATTCATTATTCCTCAGATTAGCAATCTTGCCAGCATCTGGTTCATTTCTCTCTTTCTTTCCATCTTTGCCACTGGTATTCTGGAAATGAGATGGAGTGGTGTCGGAATCGATGAATGGTGGAGAAACGAGCAGTTCTGGGTTATTGGAGGTGTGTCGGCCCATCTGTTTGCTGTTTTCCAAGGTCTGCTTAAAGTTCTTGCTGGAATCGATACCAACTTCACGGTTACTTCGAAAGCATCCGACGAAGATGGAGATTTTGCTGAGCTCTACCTGTTCAAATGGACCACTCTCCTCATTCCCCCAACTACTCTCCTAATTATCAACATAGTTGGAGTTGTTGCTGGAATTTCTTATGCCATTAACAGCGGCTACCAATCATGGGGTCCGCTTTTCGGCAAACTGTTTTTCGCTTTCTGGGTGATTATTCATCTGTATCCCTTCCTCAAGGGTCTGATGGGTCGCCAGAACCGAACTCCCACGATCGTGGTTGTATGGTCCATTCTCCTTGCCTCAATCTTCTCCCTTTTATGGGTTCGAATCGATCCCTTCACAAGCCGGGTAACTGGTCCTGACGTCGAACAGTGTGGAATCAACTGCTAA 3270 45.5 MNIIEDLSNVHALTQRHIEVESDCLEDRAGSSSGPAAMEPADDISGKSSKHPIGAGQVCQICSDSIGTTADGDPFVACDVCAFPVCRPCYEYERKDGNQSCPQCKTKYKWHKGSPPVNGEAVEDEDVNGVAAAQERHHKLPERTLSWDTNYDKEGSFNHIPLLTAGRSVSGELSAASPERLSMASPESGSRANYRIMDQSRDSGSARFGNVAWKERIDSWKVKQDKSVPPMSVSHAPSEGRGGADFDASTDVVIDDSLLNDEARQPLSRKVSIPSSRINPYRMVIVLRLVILCIFLHYRITNPVPNAFALWLISVICEIWFAVSWILDQFPKWLPVNRETYLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLSFEALSETSEFARKWVPFCKKFSIEPRAPEWYFAQKIDYLKDKVQPSFVKERRAMKREYEEFKIRVNGLVAKAQKIPDEGWVMQDGTPWPGNNTRDHPGMIQVFLGHSGGLDTDGHELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFMLNLDCDHYINNSKALREAMCFLMDPNLGKSVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPLKPKHKKSGFFSSCFGKSKKKSSKSKRKDSDKKQANKNVDPTVPIFNLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATPESLLKEAIHVISCGYEDKTDWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCIPDRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPMWYGYGGRLKWLERFAYINTTIYPITSIPLLAYCTLPAICLLTGKFIIPQISNLASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFAELYLFKWTTLLIPPTTLLIINIVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIIHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRIDPFTSRVTGPDVEQCGINC 1089
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 52598062 52608043 + Hsped.04g03840.1 Hepe04g0384 567522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe04g0384 1089 CDD mRING-HC-C4C4_CesA 57 107 - -
Hepe04g0384 1089 MobiDBLite consensus disorder prediction 670 692 - -
Hepe04g0384 1089 ProSiteProfiles Zinc finger RING-type profile. 59 105 IPR001841 -
Hepe04g0384 1089 FunFam Cellulose synthase 478 652 - -
Hepe04g0384 1089 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 269 1058 - GO:0005802(PANTHER)|GO:0005886(PANTHER)|GO:0009833(PANTHER)|GO:0016759(PANTHER)|GO:0030244(PANTHER)
Hepe04g0384 1089 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 504 652 IPR029044 -
Hepe04g0384 1089 Pfam Zinc-binding RING-finger 55 125 IPR027934 -
Hepe04g0384 1089 SUPERFAMILY RING/U-box 51 124 - -
Hepe04g0384 1089 Pfam Cellulose synthase 361 1082 IPR005150 GO:0016020(InterPro)|GO:0016760(InterPro)|GO:0030244(InterPro)
Hepe04g0384 1089 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 42 133 IPR013083 -
Hepe04g0384 1089 MobiDBLite consensus disorder prediction 25 49 - -
Hepe04g0384 1089 SUPERFAMILY Nucleotide-diphospho-sugar transferases 375 890 IPR029044 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g1745 Hepe-Chr3:74335562 Hepe04g0384 Hepe-Chr4:52598062 0.0 dispersed
Hepe04g0384 Hepe-Chr4:52598062 Hepe09g0560 Hepe-Chr9:5290150 0.0 dispersed
Hepe04g0384 Hepe-Chr4:52598062 Hepe07g1844 Hepe-Chr7:61367337 2.15e-308 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe04g0384 K10999 - csv:101211779 2053.1