Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe04g0384 | ATGAATATTATTGAGGATTTGTCTAATGTACATGCCCTCACACAACGACATATTGAGGTGGAATCAGATTGCTTGGAGGATCGAGCAGGATCCTCGAGTGGACCAGCAGCTATGGAGCCCGCCGATGATATTTCTGGGAAATCGTCCAAACATCCGATTGGGGCCGGCCAGGTTTGTCAGATCTGCAGCGATTCCATCGGCACGACGGCTGACGGCGACCCCTTTGTTGCGTGTGATGTTTGTGCATTTCCGGTTTGCCGTCCTTGTTACGAGTACGAGAGGAAAGACGGGAATCAGTCTTGCCCTCAATGCAAGACCAAATACAAATGGCATAAAGGAAGTCCTCCGGTTAATGGAGAGGCTGTGGAAGATGAGGATGTTAATGGAGTAGCAGCGGCACAAGAAAGACACCATAAGTTACCTGAGCGAACTCTTAGCTGGGATACTAATTATGATAAGGAGGGATCTTTTAATCACATTCCTTTGCTCACTGCTGGACGATCTGTTTCGGGAGAACTGTCGGCTGCATCCCCGGAGCGGCTCTCCATGGCGTCTCCTGAAAGTGGGAGCAGGGCTAACTATAGAATCATGGATCAATCGAGAGATTCGGGATCAGCTAGATTTGGCAATGTGGCCTGGAAAGAGAGAATAGATAGTTGGAAGGTGAAGCAGGACAAGAGTGTGCCGCCAATGAGTGTCAGTCATGCACCTTCTGAAGGAAGGGGTGGTGCAGATTTTGACGCGAGCACTGATGTCGTGATCGATGATTCGTTACTAAATGATGAAGCCCGCCAGCCTCTTTCGAGGAAGGTTTCTATTCCATCCTCTAGGATTAACCCTTATAGGATGGTCATAGTTCTGCGACTTGTTATTCTTTGCATCTTCTTGCACTACCGGATTACAAATCCAGTTCCCAATGCCTTTGCTCTGTGGTTAATATCAGTGATTTGTGAGATATGGTTTGCTGTATCTTGGATTTTGGATCAGTTCCCCAAATGGCTCCCGGTCAATCGTGAGACATATCTTGATAGGCTTGCTCTACGATATGATCGTGAAGGAGAGCCATCTCAGTTGGCTGCTGTCGACATATTTGTCAGTACTGTCGACCCTCTGAAAGAACCTCCCCTTGTCACAGCCAATACAGTCCTATCAATTCTCGCTGTGGACTATCCTGTCGATAAAGTTTCTTGCTATGTATCAGATGATGGAGCTGCTATGTTATCATTCGAAGCATTGTCCGAAACATCCGAATTTGCAAGAAAATGGGTTCCTTTCTGCAAGAAGTTCAGCATTGAGCCACGAGCACCGGAGTGGTATTTTGCTCAGAAGATTGATTACTTAAAGGACAAGGTTCAACCATCATTTGTGAAGGAGCGGCGAGCAATGAAGAGAGAATACGAGGAGTTCAAAATTCGTGTCAATGGACTTGTTGCTAAGGCACAGAAAATTCCTGATGAAGGGTGGGTCATGCAAGATGGTACACCATGGCCTGGAAATAACACCAGAGATCATCCAGGAATGATTCAGGTTTTCTTAGGGCACAGTGGAGGACTTGATACTGACGGTCATGAGCTTCCACGTTTAGTTTATGTTTCTCGTGAGAAGCGTCCTGGTTTCCAACATCACAAAAAGGCTGGTGCTATGAATGCACTTGTTCGCGTATCTGCTGTTCTTACCAATGGACCCTTCATGTTAAATCTTGATTGTGATCATTACATAAACAACAGTAAAGCGTTACGGGAAGCTATGTGTTTTCTGATGGATCCTAATCTTGGAAAATCAGTGTGCTATGTTCAGTTTCCCCAGAGGTTTGACGGGATTGATAGAAATGATCGATACGCCAATCGTAACACTGTTTTCTTTGATATCAATCTTCGAGGCTTGGATGGCATCCAAGGTCCGGTTTATGTGGGAACAGGATGTGTTTTCAATCGAACTGCATTGTATGGCTATGAACCCCCTCTCAAGCCCAAGCATAAAAAATCAGGGTTCTTCTCCAGTTGCTTTGGGAAATCAAAAAAGAAAAGTTCTAAATCGAAAAGGAAGGACTCTGATAAGAAGCAAGCAAATAAAAATGTCGATCCCACCGTGCCAATATTCAACCTTGAGGATATTGAGGAAGGAGTTGAAGGTGCCGGGTTTGACGACGAGAAATCACTACTAATGTCACAAATGAGCCTGGAGAAGAGGTTTGGTCAATCAGCTGTATTCGTTGCTTCCACACTAATGGAGAATGGTGGCGTGCCGCAGTCTGCCACTCCGGAATCTCTCCTTAAAGAAGCAATTCATGTCATCAGTTGCGGATACGAAGACAAAACAGACTGGGGAAGTGAAATTGGATGGATCTATGGTTCTGTCACAGAGGATATTTTGACAGGGTTCAAGATGCATGCCCGTGGTTGGAGATCAATCTATTGCATACCAGACCGTCCTGCATTTAAAGGATCTGCTCCCATTAATCTTTCTGATCGTCTTAACCAAGTGCTTCGGTGGGCGTTAGGTTCGGTTGAAATTCTTTTCAGTCGGCATTGCCCTATGTGGTACGGTTATGGTGGACGGTTGAAATGGCTCGAGAGATTTGCTTATATTAACACCACCATTTACCCAATAACATCCATTCCTCTTCTTGCCTATTGTACCTTACCTGCAATATGTCTGCTCACTGGAAAATTCATTATTCCTCAGATTAGCAATCTTGCCAGCATCTGGTTCATTTCTCTCTTTCTTTCCATCTTTGCCACTGGTATTCTGGAAATGAGATGGAGTGGTGTCGGAATCGATGAATGGTGGAGAAACGAGCAGTTCTGGGTTATTGGAGGTGTGTCGGCCCATCTGTTTGCTGTTTTCCAAGGTCTGCTTAAAGTTCTTGCTGGAATCGATACCAACTTCACGGTTACTTCGAAAGCATCCGACGAAGATGGAGATTTTGCTGAGCTCTACCTGTTCAAATGGACCACTCTCCTCATTCCCCCAACTACTCTCCTAATTATCAACATAGTTGGAGTTGTTGCTGGAATTTCTTATGCCATTAACAGCGGCTACCAATCATGGGGTCCGCTTTTCGGCAAACTGTTTTTCGCTTTCTGGGTGATTATTCATCTGTATCCCTTCCTCAAGGGTCTGATGGGTCGCCAGAACCGAACTCCCACGATCGTGGTTGTATGGTCCATTCTCCTTGCCTCAATCTTCTCCCTTTTATGGGTTCGAATCGATCCCTTCACAAGCCGGGTAACTGGTCCTGACGTCGAACAGTGTGGAATCAACTGCTAA | 3270 | 45.5 | MNIIEDLSNVHALTQRHIEVESDCLEDRAGSSSGPAAMEPADDISGKSSKHPIGAGQVCQICSDSIGTTADGDPFVACDVCAFPVCRPCYEYERKDGNQSCPQCKTKYKWHKGSPPVNGEAVEDEDVNGVAAAQERHHKLPERTLSWDTNYDKEGSFNHIPLLTAGRSVSGELSAASPERLSMASPESGSRANYRIMDQSRDSGSARFGNVAWKERIDSWKVKQDKSVPPMSVSHAPSEGRGGADFDASTDVVIDDSLLNDEARQPLSRKVSIPSSRINPYRMVIVLRLVILCIFLHYRITNPVPNAFALWLISVICEIWFAVSWILDQFPKWLPVNRETYLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLSFEALSETSEFARKWVPFCKKFSIEPRAPEWYFAQKIDYLKDKVQPSFVKERRAMKREYEEFKIRVNGLVAKAQKIPDEGWVMQDGTPWPGNNTRDHPGMIQVFLGHSGGLDTDGHELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFMLNLDCDHYINNSKALREAMCFLMDPNLGKSVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPLKPKHKKSGFFSSCFGKSKKKSSKSKRKDSDKKQANKNVDPTVPIFNLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATPESLLKEAIHVISCGYEDKTDWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCIPDRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPMWYGYGGRLKWLERFAYINTTIYPITSIPLLAYCTLPAICLLTGKFIIPQISNLASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFAELYLFKWTTLLIPPTTLLIINIVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIIHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRIDPFTSRVTGPDVEQCGINC | 1089 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 52598062 | 52608043 | + | Hsped.04g03840.1 | Hepe04g0384 | 567522 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe04g0384 | 1089 | CDD | mRING-HC-C4C4_CesA | 57 | 107 | - | - | |
Hepe04g0384 | 1089 | MobiDBLite | consensus disorder prediction | 670 | 692 | - | - | |
Hepe04g0384 | 1089 | ProSiteProfiles | Zinc finger RING-type profile. | 59 | 105 | IPR001841 | - | |
Hepe04g0384 | 1089 | FunFam | Cellulose synthase | 478 | 652 | - | - | |
Hepe04g0384 | 1089 | PANTHER | X-BOX TRANSCRIPTION FACTOR-RELATED | 269 | 1058 | - | GO:0005802(PANTHER)|GO:0005886(PANTHER)|GO:0009833(PANTHER)|GO:0016759(PANTHER)|GO:0030244(PANTHER) | |
Hepe04g0384 | 1089 | Gene3D | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 504 | 652 | IPR029044 | - | |
Hepe04g0384 | 1089 | Pfam | Zinc-binding RING-finger | 55 | 125 | IPR027934 | - | |
Hepe04g0384 | 1089 | SUPERFAMILY | RING/U-box | 51 | 124 | - | - | |
Hepe04g0384 | 1089 | Pfam | Cellulose synthase | 361 | 1082 | IPR005150 | GO:0016020(InterPro)|GO:0016760(InterPro)|GO:0030244(InterPro) | |
Hepe04g0384 | 1089 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 42 | 133 | IPR013083 | - | |
Hepe04g0384 | 1089 | MobiDBLite | consensus disorder prediction | 25 | 49 | - | - | |
Hepe04g0384 | 1089 | SUPERFAMILY | Nucleotide-diphospho-sugar transferases | 375 | 890 | IPR029044 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe03g1745 | Hepe-Chr3:74335562 | Hepe04g0384 | Hepe-Chr4:52598062 | 0.0 | dispersed | |
Hepe04g0384 | Hepe-Chr4:52598062 | Hepe09g0560 | Hepe-Chr9:5290150 | 0.0 | dispersed | |
Hepe04g0384 | Hepe-Chr4:52598062 | Hepe07g1844 | Hepe-Chr7:61367337 | 2.15e-308 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe04g0384 | K10999 | - | csv:101211779 | 2053.1 |