Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe04g0485 | ATGGGATCTTCCGTTGCTGCAATGAGCATGGTTTCCGAGTCCAAATTCCATGTTCTTGCTGTCGATGATAGCATCATCGATAGGAAATTGATTGAAAGACTCCTTAAAACCTCCTCTTATCAAGTCACTACGGTTGATTCTGGGAGTAAGGCTTTGGAGTTTTTGGGATATGACCTTGGAAATAACTCGATTCCTTCTGTTTTGCCTAACCATCTTCATCATCATCATCATCAGGAAGTGGATGTGAATCTTGTAATTACTGATTACTGTATGCCTGGGATGACTGGATATGATTTGTTAAAGAAGATCAAGGGGTCTAAAACTCTGAGAAACATACCTGTTGTGATTATGTCATCTGAGAATGTACCTGCAAGAATCAATAGATGCTTAGAAGAAGGAGCAGAAGAATTCTTCTTGAAACCGGTTCGACTCTCCGATGTCAACAGGCTTAAACCTCACATGTTGAAAACCAAACTCAAATGTGACGAACCAGAAAGAACAGAAGAAGGTGAGCCTGATTTGGGAAGCCAATCCCAAGCTCTAGAGCAGCCGCAACAACAGCAACAACAACAACATGAACAAGAACAAGAACAAGTACGATCAACGTTACCGCAGCAGGTCCCGACACTGCTGCAAGATCAAGATCGATTACAATCCGTACCACAGCTGCCAACGCCGCAACAGGAGCAAGAACAGTTGCAATTACTCCCACCAACACCGCCGCAGCAATCGAACAACAACAAGAGGAAGGCAATGGAAGATGGACTTTCACCAGATAGAACAAGGCCTAGATACAATGGTATTACCACCATGGTGTAG | 819 | 43.47 | MGSSVAAMSMVSESKFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGYDLGNNSIPSVLPNHLHHHHHQEVDVNLVITDYCMPGMTGYDLLKKIKGSKTLRNIPVVIMSSENVPARINRCLEEGAEEFFLKPVRLSDVNRLKPHMLKTKLKCDEPERTEEGEPDLGSQSQALEQPQQQQQQQHEQEQEQVRSTLPQQVPTLLQDQDRLQSVPQLPTPQQEQEQLQLLPPTPPQQSNNNKRKAMEDGLSPDRTRPRYNGITTMV | 272 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 56344491 | 56346415 | - | Hsped.04g04850.1 | Hepe04g0485 | 567623 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe04g0485 | 272 | SUPERFAMILY | CheY-like | 14 | 163 | IPR011006 | - | |
Hepe04g0485 | 272 | Gene3D | - | 17 | 262 | - | - | |
Hepe04g0485 | 272 | SMART | REC_2 | 16 | 154 | IPR001789 | GO:0000160(InterPro) | |
Hepe04g0485 | 272 | Pfam | Response regulator receiver domain | 77 | 146 | IPR001789 | GO:0000160(InterPro) | |
Hepe04g0485 | 272 | MobiDBLite | consensus disorder prediction | 219 | 251 | - | - | |
Hepe04g0485 | 272 | ProSiteProfiles | Response regulatory domain profile. | 17 | 155 | IPR001789 | GO:0000160(InterPro) | |
Hepe04g0485 | 272 | MobiDBLite | consensus disorder prediction | 173 | 201 | - | - | |
Hepe04g0485 | 272 | MobiDBLite | consensus disorder prediction | 158 | 172 | - | - | |
Hepe04g0485 | 272 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 12 | 223 | IPR045279 | GO:0009736(InterPro) | |
Hepe04g0485 | 272 | CDD | REC_typeA_ARR | 18 | 150 | - | - | |
Hepe04g0485 | 272 | MobiDBLite | consensus disorder prediction | 158 | 201 | - | - | |
Hepe04g0485 | 272 | MobiDBLite | consensus disorder prediction | 219 | 272 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe02g2525 | Hepe-Chr2:71971938 | Hepe04g0485 | Hepe-Chr4:56344491 | 8.80e-64 | dispersed | |
Hepe04g0485 | Hepe-Chr4:56344491 | Hepe09g0164 | Hepe-Chr9:1312143 | 1.30e-46 | dispersed | |
Hepe04g0485 | Hepe-Chr4:56344491 | Hepe05g0710 | Hepe-Chr5:12677465 | 5.61e-75 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
55363 | PF00072 | Response_reg | 2.80E-18 | CL0304 | Hepe | TR |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe04g0485 | K14492 | - | csv:101220999 | 380.948 |