Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe04g0503 ATGGAAAACACTGGTATAAAAGCAGAATTTCGTAAGCCTTCTTCTGAAACAACTGGCAGAAAGTATAGGCGTCGATCTTCTGTCAGTGGGTCATCGTCATCGGATGAAAGTCCTAAACGAGACTGCAGTTCGAGTCCGAAGTTCTTGAGAGATGATGTTTCAAGAGACTCTGAACGGCAACCAAGAAGGAAAGACGATGAAAGGGATTTGAATAAGGATTCTAGAAGTCATCATAGTCGAAGTTCTGATTCTTATAGATATGATCGTAAATCCTCTAGAAGTTCGCATGGTTACTCTAGGCATGATGATTATGCCAGACATGACAAATATGCAGATGAAGAAAGAGATAATGAGCGGTTATCCTCTCGTTCTGGTAGGGAGTTGAAGGGTGGTGCTCATTATGATCATACAAGACGAGATAACGATCATTTTCGTTCACGAGACTACTTCCGGGATGCAGAAAAAAGTTCTCGAGATAAATATGATGGTTATGGACATAGAAGTAGGGAGGGAGATTCATTACCTGAGAGGCATGGTTCAGGTAGTAAAAAGCACGTAAATTCCGAAGAAATGGAGAAACATAGGAATATAAGAGATCGTGATGGTCGAGATGAGAAGAGAGACAATATGAAGCATTCTGGAGACCACAAAAATGAACGGGTGCTCTCCCATGACGATACTAGGGGCAATCGATATGACTCATTTTCAGGAAGGGATGAAGGTAGGCACCGCATGAAAGAAATTTATAAGAGCGACCGGAAAGAACTTGATGGTGAAAAGTTTGCTAGAGAGGAAAAGAAATATGATGGCAGAGAAACTAACTGGGACAAGGGCCAAGGTAAAGAATCAAAGGGAAAATATGATGGTAAAGGTGTTTTTGTTGATGAAAATCAAGGATCCCCTGCTAAAAAACCTAAATTGTTTAGCTCAGGAAAAGAAGTTAATCATGAACAGGATGCTGAAGAAAATCAATCTTCAATCTCTAAGCAAGAACAGGATGGAAAACTGAATTTAGGACAAGGCCAAAGTGGCGACTCTGATTTTGATGCTGACTTCAGTGCTGCAAAAGTTGCTGCAATGAAAGCTGCTGAATTAGTTAATAAGAACATTGTTGGAGTGGGTTATATGTCTACTGATCAAAAGAAGAAGCTGCTGTGGGGGAGCAAAAAGAGCACTGCCGTAGAGGAGCCTGGACACCAGTGGGACACGGCATTGTTTAACGATCGCGAACGGCAAGAGAAATTCAACAAACTCATGGTAAACTCTCCCCCTCCCCTCCCCTCCCCTTTTATTCAATACATCCCTGAATGTTAG 1314 41.7 MENTGIKAEFRKPSSETTGRKYRRRSSVSGSSSSDESPKRDCSSSPKFLRDDVSRDSERQPRRKDDERDLNKDSRSHHSRSSDSYRYDRKSSRSSHGYSRHDDYARHDKYADEERDNERLSSRSGRELKGGAHYDHTRRDNDHFRSRDYFRDAEKSSRDKYDGYGHRSREGDSLPERHGSGSKKHVNSEEMEKHRNIRDRDGRDEKRDNMKHSGDHKNERVLSHDDTRGNRYDSFSGRDEGRHRMKEIYKSDRKELDGEKFAREEKKYDGRETNWDKGQGKESKGKYDGKGVFVDENQGSPAKKPKLFSSGKEVNHEQDAEENQSSISKQEQDGKLNLGQGQSGDSDFDADFSAAKVAAMKAAELVNKNIVGVGYMSTDQKKKLLWGSKKSTAVEEPGHQWDTALFNDRERQEKFNKLMVNSPPPLPSPFIQYIPEC 437
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 57053000 57057211 - Hsped.04g05030.1 Hepe04g0503 567641

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Hepe04g0503 437 MobiDBLite consensus disorder prediction 309 328 - -
Hepe04g0503 437 MobiDBLite consensus disorder prediction 40 291 - -
Hepe04g0503 437 MobiDBLite consensus disorder prediction 24 39 - -
Hepe04g0503 437 MobiDBLite consensus disorder prediction 1 23 - -
Hepe04g0503 437 MobiDBLite consensus disorder prediction 1 348 - -
Hepe04g0503 437 MobiDBLite consensus disorder prediction 329 347 - -
Hepe04g0503 437 PANTHER UNCHARACTERIZED 5 419 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe04g0503 - - - - 0.0
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi8g1099 . . . Bda03g00633 . . . . . . . Cma07g00885 Car03g01074 Car07g00874 Sed14g0032 . . Bhi03g02494 Tan03g0497 Cmetu08g0067 . Hepe04g0503 . . Cla04g00576 . . Cco04g0720 . . Cre04g0653 . . . . Lsi01g01277 Csa06g02632 Chy08g00890 . . . . . Bpe04g00596 . . Bma04g00502 . . Cmo07g00917 . . . . . Cpe19g00440 . . . . . . . . . . . . . . . . . Cme08g01406
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003877 2 4 0 1 1 1 2 1 1 1 1 1 3 1 1 2 1 2 2 1 1 0 1 1 1 1 1 5 3 1 44