Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe04g0650 ATGGAAAAGTACGAGAAGCTCGAAAAGGTCGGCGAAGGAACTTACGGCAAAGTCTACAAAGCCAAAGACAAAGAAACCGGCCAACTCGTCGCTCTGAAGAAAACCCGTCTCGAAATGGACGAAGAAGGCGTTCCTCCCACGGCTCTTCGCGAGGTTTCTCTTCTTCAATTGCTCTCTCAATCCCTCTACGTCGTTCGTCTTCTCTGTGTCGAGCATGTTCATCATCATAAAAGCGGTAAGCCTCTTCTTTATCTTGTCTTTGAGTATCTCGACACTGATCTCAAGAAGTACATCGATTCGCATCGCAAAGGTCCCAATCCTAGGCCTCTTCCTTCCACTCTTGTTCAGAGTTTCCTGTTTCAGCTCTGTAAGGGCGTCGCGCATTGTCATAGCCATGGCGTTCTTCATCGTGATCTCAAGCCGCAGAATCTTCTTCTCGATCAAGGTAAGGGTGTGTTGAAGATTGCTGATCTTGGCCTTGGACGTGCTTTTACTGTTCCACTTAAGAGCTACACTCATGAGATTGTTACTCTTTGGTATCGTGCTCCTGAGGTTCTCCTTGGATCTACTCATTACTCCACTGCTGTCGATATGTGGTCTGTTGGTTGCATCTTCGCTGAAATGGTGAGAAGGCAGGCCATGTTTCCCGGAGATTCTGAGTTCCAGCAGTTGCTCCACATTTTTAGGCTGCTAGGTACCCCCACCGAGAAACAGTGGCCTGGAGTTAGTTCTTTGCGGGATTGGCATGTCTATCCTCAATGGGAACCTCAGAATCTAACACGTGCAGTTCCATCCCTGGAACCCGAGGGTGTTGACCTTCTCTCGAAAATGCTTAAATATAATCCAGCAGACAGAATCTCAGCGAAAGCAGCTCTAGACCATCCGTATTTTGATGGCCTCGACAAGTCTCAGTATTAG 918 47.82 MEKYEKLEKVGEGTYGKVYKAKDKETGQLVALKKTRLEMDEEGVPPTALREVSLLQLLSQSLYVVRLLCVEHVHHHKSGKPLLYLVFEYLDTDLKKYIDSHRKGPNPRPLPSTLVQSFLFQLCKGVAHCHSHGVLHRDLKPQNLLLDQGKGVLKIADLGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQAMFPGDSEFQQLLHIFRLLGTPTEKQWPGVSSLRDWHVYPQWEPQNLTRAVPSLEPEGVDLLSKMLKYNPADRISAKAALDHPYFDGLDKSQY 305
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 59790818 59794065 + Hsped.04g06500.1 Hepe04g0650 567788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe04g0650 305 Gene3D Transferase(Phosphotransferase) domain 1 92 305 - -
Hepe04g0650 305 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524(InterPro)
Hepe04g0650 305 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe04g0650 305 ProSiteProfiles Protein kinase domain profile. 4 297 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe04g0650 305 PANTHER CELL DIVISION PROTEIN KINASE 3 297 IPR050108 GO:0000082(PANTHER)|GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0004693(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER)|GO:0010033(PANTHER)|GO:0010389(PANTHER)|GO:0010468(PANTHER)|GO:0030332(PANTHER)
Hepe04g0650 305 SMART serkin_6 4 297 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe04g0650 305 FunFam Cyclin-dependent kinase B2,2 1 91 - -
Hepe04g0650 305 Gene3D Phosphorylase Kinase; domain 1 1 91 - -
Hepe04g0650 305 FunFam Cyclin-dependent kinase 2 93 304 - -
Hepe04g0650 305 SUPERFAMILY Protein kinase-like (PK-like) 1 300 IPR011009 -
Hepe04g0650 305 Pfam Protein kinase domain 4 297 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g0650 Hepe-Chr4:59790818 Hepe10g1534 Hepe-Chr10:52091184 9.01e-76 dispersed
Hepe01g1084 Hepe-Chr1:75683739 Hepe04g0650 Hepe-Chr4:59790818 5.14e-118 transposed
Hepe01g2369 Hepe-Chr1:88119000 Hepe04g0650 Hepe-Chr4:59790818 5.01e-154 transposed
Hepe02g2730 Hepe-Chr2:75656560 Hepe04g0650 Hepe-Chr4:59790818 7.52e-13 transposed
Hepe04g0650 Hepe-Chr4:59790818 Hepe04g1150 Hepe-Chr4:66639311 2.88e-55 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72714 PF00069 Pkinase 8.40E-67 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe04g0650 K07760 - csv:101204557 602.053