Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe04g0672 ATGAGGCTACAATCCCTTTTTGCAACATTGTCCTTACTCTTACTCATATATTTTCTCTCCTTCATTGCGGCTGATCTGAACTCAGACAAGCAAGCTCTTCTCGAGTTCATTTCAACGGTTCCCCATGGTCGAAAAATCAACTGGGATTCTTCTACTCCAGTGTGCTCTACCTGGGTTGGCATCACTTGCACTTCAGACCTCTCAAATGTGCTTGCTCTCAGGCTGCCCGCCATTGGACTGTATGGTCCGATCCCCGCCAATACACTTGGAAAGTTAGATGCCCTTCGAACTTTGAGTCTTCGATCTAACAATCTTAATGGAAACCTTCCATCAGATGTTCTATCCCTTCCCTCCCTAAAGTTTATATATCTTCAACACAATAACTTTTCTGGTAAAATTCCTTCTTCCCTGTCTGCTGACCTTACCTTCCTTGATCTGTCCTTCAACTCTTTCACTGGAAACATTCCGTCATCTATACAAAATTTAACGCACCTCGCTAGCCTCAACATTCAAAACAATTTCCTGACCGGATCCATTCCTGATATAGGTCACCTAAAGCTTAAGCAATTGAACTTGAGCTACAACCATCTTAGCGGTCCCATTCCTGCTTCACTGCAATCATTTCCTCCTTCTTCCTTTGAAGGGAACTTGCTGCTATGTGGATCTCCTCTGAAACATTGCTCTCTTGATGCCCCCTTACCATCTCCATCTCCCGCTGATTTGGCCCCACCGAAGAAAAAGAGTGAAAAGAGAATAAATATTGGAGCGATCGTCGCCATTGCATTAGGTGGTTCTGCAGTGCTCTTCCTTTTCGTGATAATGATTGTTGTCTGCTGTATGAAGAAAAGAGATGGTGAAGGTATTACTGCTGCAGTGAAAGGAAAGGGTAAAAGAAGCGAGCAACCGAAGGAGGATTTTGGAAGCGGGGTACAAGAGCCAGAGAAAAATAGGCTGGTTTTCTTTGAAGGATGTTCTTATAATTTCGATCTTGAGGACTTGCTAAGGGCTTCGGCCGAAGTGCTCGGAAAGGGGAGTTATGGGACGACTTACAAGGCAATCTTGGAGGAAGGAACGACAGTGGTAGTAAAGAGGTTGAAAGAAGTGGTGGCTGGGAAAAAGGAATTTGATCAACAGATGGAGATTGTTGGGAGGATGGGCCAGCATCCAAATGTCGTGCCTCTCCGCGCCTATTACTATTCAAAAGACGAGAAGCTTTTAGTTTACGATTATGCCGTTGCTGGAAGCTTTTCAGCATTACTCCGTGGAAGCCGAGAAGGCGGACGAGCGCCTCCTGATTGGGAAACGAGAGTGAAGGTTTCACTGGGGTGTGCCAGAGGCCTTGCACATATCCATTCAGCAAGTGGGGGAAAATTCATCCATGGCAACATAAAGTCCTCTAACATCCTTCTCACACAAGACCTGAATGGTTCTATTTCAGATTTTGGCCTGACTCCTTTGATGAACTCCCCTGCCATTCCCTCTAGAAGCACAGGTTATCGTGCTCCCGAGGTGATCGAGACTCGGAAACCAACTCAAAAGTCTGACGTTTACAGTTTTGGAGTCATTTTGCTTGAGATGTTGACTGGGAAAGCGCCATCCCAATCGCCAGGCCGCGACGATGTAATGGACCTTCCGAGATGGGTCCAGTCTGTGGTAAGAGAGGAATGGACATCTGAGGTGTTTGATGTAGAGCTAATGAAGTATCAGAACATCGAAGAAGAGTTGGTACAAATGCTCCAAATAGCAATGGCTTGTGTGTCTCGGATGCCGGATATGAGACCAACAATGGAGGAAATCGTTAGGATGATCGAGGATATCCGACCATCCGACTCGGGAACTCGACCATCATCAGAAGATAACAAAGCCGGGGACGGAGACGGAGATGGGGATGATGACCCGAATACTCAGACCTTGTAA 1917 46.17 MRLQSLFATLSLLLLIYFLSFIAADLNSDKQALLEFISTVPHGRKINWDSSTPVCSTWVGITCTSDLSNVLALRLPAIGLYGPIPANTLGKLDALRTLSLRSNNLNGNLPSDVLSLPSLKFIYLQHNNFSGKIPSSLSADLTFLDLSFNSFTGNIPSSIQNLTHLASLNIQNNFLTGSIPDIGHLKLKQLNLSYNHLSGPIPASLQSFPPSSFEGNLLLCGSPLKHCSLDAPLPSPSPADLAPPKKKSEKRINIGAIVAIALGGSAVLFLFVIMIVVCCMKKRDGEGITAAVKGKGKRSEQPKEDFGSGVQEPEKNRLVFFEGCSYNFDLEDLLRASAEVLGKGSYGTTYKAILEEGTTVVVKRLKEVVAGKKEFDQQMEIVGRMGQHPNVVPLRAYYYSKDEKLLVYDYAVAGSFSALLRGSREGGRAPPDWETRVKVSLGCARGLAHIHSASGGKFIHGNIKSSNILLTQDLNGSISDFGLTPLMNSPAIPSRSTGYRAPEVIETRKPTQKSDVYSFGVILLEMLTGKAPSQSPGRDDVMDLPRWVQSVVREEWTSEVFDVELMKYQNIEEELVQMLQIAMACVSRMPDMRPTMEEIVRMIEDIRPSDSGTRPSSEDNKAGDGDGDGDDDPNTQTL 638
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 60200021 60204479 + Hsped.04g06720.1 Hepe04g0672 567810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe04g0672 638 MobiDBLite consensus disorder prediction 605 623 - -
Hepe04g0672 638 Gene3D Ribonuclease Inhibitor 140 228 IPR032675 -
Hepe04g0672 638 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 411 617 - -
Hepe04g0672 638 PANTHER OS05G0588300 PROTEIN 12 618 IPR050994 -
Hepe04g0672 638 MobiDBLite consensus disorder prediction 605 638 - -
Hepe04g0672 638 FunFam Probable inactive receptor kinase RLK902 26 182 - -
Hepe04g0672 638 Gene3D Ribonuclease Inhibitor 28 139 IPR032675 -
Hepe04g0672 638 Gene3D Phosphorylase Kinase; domain 1 302 410 - -
Hepe04g0672 638 ProSiteProfiles Protein kinase domain profile. 335 606 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe04g0672 638 ProSitePatterns Protein kinases ATP-binding region signature. 341 372 IPR017441 GO:0005524(InterPro)
Hepe04g0672 638 FunFam pollen receptor-like kinase 1 303 410 - -
Hepe04g0672 638 Gene3D Transferase(Phosphotransferase) domain 1 413 625 - -
Hepe04g0672 638 MobiDBLite consensus disorder prediction 291 310 - -
Hepe04g0672 638 Pfam Leucine rich repeat N-terminal domain 26 64 IPR013210 -
Hepe04g0672 638 Pfam Leucine Rich Repeat 95 114 IPR001611 GO:0005515(InterPro)
Hepe04g0672 638 Pfam Leucine Rich Repeat 141 162 IPR001611 GO:0005515(InterPro)
Hepe04g0672 638 Pfam Leucine Rich Repeat 118 138 IPR001611 GO:0005515(InterPro)
Hepe04g0672 638 Pfam Leucine Rich Repeat 186 207 IPR001611 GO:0005515(InterPro)
Hepe04g0672 638 SUPERFAMILY L domain-like 39 224 - -
Hepe04g0672 638 CDD STKc_IRAK 341 606 - -
Hepe04g0672 638 SUPERFAMILY Protein kinase-like (PK-like) 339 603 IPR011009 -
Hepe04g0672 638 Pfam Protein kinase domain 339 601 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g0672 Hepe-Chr4:60200021 Hepe08g0676 Hepe-Chr8:6049883 7.94e-232 dispersed
Hepe03g1670 Hepe-Chr3:73557712 Hepe04g0672 Hepe-Chr4:60200021 2.24e-09 transposed
Hepe05g0766 Hepe-Chr5:17198500 Hepe04g0672 Hepe-Chr4:60200021 2.24e-09 transposed
Hepe04g0672 Hepe-Chr4:60200021 Hepe04g1153 Hepe-Chr4:66685738 5.65e-46 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72716 PF00069 Pkinase 2.20E-38 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe04g0672 - - - 0.0