Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe04g0676 ATGAAGGAAATTCATAAGCTCCGTCTTGCATTTGCATTTGCATCCATCTTTGTTTTCGTTTTCTTGTTCTTCGATGCCCATTTGGTTTCAGCTGAAAATTACATCCCTAGAGATTTCATTCTCCTCGATTGTGGAGGGCCGTCGACGGCCAACGACATCGACGGCCGGAAATGGATGACCGATGACAATTCCAAATTTGTTCCGGCGACGGGAGATAGCACTACATCGAAAGCCGCTACTCAGGATCCTTCAGTTCCTGATATTCCTTTCATGACGGCTAGGGTTTTTCGCTCTAATTTCACCTATAGCTTTCCTGTAGCTCCCAGTCGTTTATTCCTTCGTCTCTATTTTTACCCTTCTTCTTTTGATGGCCTTAATGCATCTGATGCTCTTTTCTCTGTCTCCACTCAATCCTATACTCTTCTTAAGAACTTCAGCGCTTCACAAACTGCTGAGGCTTTGAATTTTGCGTATATCATTAAGGAATACTCGATCCATGTCGATGATGGAAGGTTGAACTTGACTTTCACTCCATCCTCAACTCATCCGAAGGCTTATGCATTTGTGAATGGGATTGAGATTGTATCTATGGCTGATATTTACAGTGAAGCTTCTGGGACTGCTTTTATTGTTGGCCAAAATACTCCATTCACTGTGGATAACACCACTGCGCTCGAGAACGTCTATCGGTTGAATGTCGGGGGGAATGATATTTCGCCTTCGGGTGATACGGGGATGTATAGGTCTTGGTTTGATGATACTCCGTACTTGTTTGGTGCAGCACAGGGAGTGACAACGAGTACTGATCAGAACACGACGATTAATTATCCGCCGAGCATTCCTACTTATGTTGCGCCGGTTGATGTCTACTCGACTGCTAGAACAATGGGACCTGATAACACTATCAATCTGAATTATAACTTGACATGGATTTTCTCTGTTGACTCTGGGTTCTTTTACCTTGCTAGGCTCCATTTTTGTGAGATTGCTGCAAATATCACAAAAATTAACCAAAGAGTGTTCGACATTTTCATCTTTAATCAAACTGCTATGGATAGTGCTGATGTGATTGCCTGGGCTGGAAGTAATGATACTCCTCTGTTCAAAGATTATGTGGTTTTTGTTCCAGGTGGTGGAAGTCCACAGATAGATTTATGGCTCGAACTGCATCCGGACAAGTCCAAGATCCCCAATTACTATGATTCAATCTTGAATGGAGTGGAGATATTCAAAATTAGCGACTCGAATGGTAATCTTGCAGGCCTGAATCCTATTCCTGCGCCGCAACAGAAAATTATTGATCCATCATTAGCTAAGCCACCATCTTCTCATGGTAAATCGAAGAATAACACAGGGATCATTGCTGGAGTTGTTTGTGGTGCAGTTGTATTAGCTCTGATCATTGGTTTCTTTGTTGTTGCTAAACGTCGCCGTGGACATGGGAAAGATTCTCGTACTGTTGAAGGACCATCAGGATGGCTTCCTCTTTCTCTCTATGGAAATTCCCATTCAGCTGGATCTGCTAAGACAAATACAACTGGAAGCTATACATCCTCCCTGCCTTCCAACCTTTGCCGCCACTTCTCATTTTCTGAGATCAAGGCTGCCACAAAGAACTTTGATGAATCTTTAGTACTTGGAGTGGGTGGTTTTGGCAAAGTTTACAAGGGAGAAATTGATGGTGGGACTATGACAGTTGCGATCAAGCGTGGGAACCCTCTCTCCGAGCAAGGTGTGCATGAATTTCAAACTGAGATTGAAATGCTCTCTAAGCTTCGCCATCGCCACCTTGTTTCGCTGATTGGCTACTGCGAAGAGAATTGTGAAATGATCCTGGTTTATGATCACATGGCTCATGGAACACTGCGAGAACATTTATACAAGACCCAAAAGCCACCATTGTCTTGGAGGCAAAGGCTCGAGATATGCATCGGAGCTGCCCGTGGTCTGCATTATCTCCACACTGGTGCCAAGTATACAATTATTCACCGAGATGTGAAGACAACCAACATCCTTTTGGATGAGAAGTGGGTGGCAAAAGTATCCGATTTCGGGTTGTCGAAAACTGGTCCTACATTGGATCATACACATGTTAGCACTGTAGTGAAAGGTAGTTTCGGATACTTGGATCCCGAATACTTTAGGCGTCAGCAATTGACCGACAAATCAGATGTTTACTCCTTCGGAGTCGTTCTCTTCGAGGTCCTGTGCGCCCGGCCAGCCCTGAACCCAACACTTGCCAAGGAGCAAGTGAGTTTAGCCGAATGGGCTGCACACTGCTACAACAAAGGCATTTTAGATCACATAACCGACCCATTCCTAAAGGGGAAGATCGCATCCGAGTGTCTCAAGAAGTTTGCAGAGACAGCAATGAAATGTGTGTCTGATCAGGGCATCGACAGGCCATCAATGGGCGACGTTCTCTGGAATCTAGAGTTCGCATTGCAGCTGCAGGAGAGTGCAGAAGAGAGCGGCAAGCTAGGCAGCGGGATAGAAATGGAAGAAGGTCAGCTCGACGTAGTATACAAAGGGAAGAAGGATCCAGATGCTTCCCCCGGCATGGATGGAAACATAACCGACTCGAGAAGCACCGGAATCAGTATGAGCATTGGAAGCCGAAGCCTTGCGAGTGAAGATTCCGACGGGTTGACGCCGAGTGCTGTGTTCTCACAGATCATGAACCCGAAAGGTCGTTAA 2697 45.31 MKEIHKLRLAFAFASIFVFVFLFFDAHLVSAENYIPRDFILLDCGGPSTANDIDGRKWMTDDNSKFVPATGDSTTSKAATQDPSVPDIPFMTARVFRSNFTYSFPVAPSRLFLRLYFYPSSFDGLNASDALFSVSTQSYTLLKNFSASQTAEALNFAYIIKEYSIHVDDGRLNLTFTPSSTHPKAYAFVNGIEIVSMADIYSEASGTAFIVGQNTPFTVDNTTALENVYRLNVGGNDISPSGDTGMYRSWFDDTPYLFGAAQGVTTSTDQNTTINYPPSIPTYVAPVDVYSTARTMGPDNTINLNYNLTWIFSVDSGFFYLARLHFCEIAANITKINQRVFDIFIFNQTAMDSADVIAWAGSNDTPLFKDYVVFVPGGGSPQIDLWLELHPDKSKIPNYYDSILNGVEIFKISDSNGNLAGLNPIPAPQQKIIDPSLAKPPSSHGKSKNNTGIIAGVVCGAVVLALIIGFFVVAKRRRGHGKDSRTVEGPSGWLPLSLYGNSHSAGSAKTNTTGSYTSSLPSNLCRHFSFSEIKAATKNFDESLVLGVGGFGKVYKGEIDGGTMTVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDHMAHGTLREHLYKTQKPPLSWRQRLEICIGAARGLHYLHTGAKYTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTLDHTHVSTVVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPALNPTLAKEQVSLAEWAAHCYNKGILDHITDPFLKGKIASECLKKFAETAMKCVSDQGIDRPSMGDVLWNLEFALQLQESAEESGKLGSGIEMEEGQLDVVYKGKKDPDASPGMDGNITDSRSTGISMSIGSRSLASEDSDGLTPSAVFSQIMNPKGR 898
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 60241003 60244556 - Hsped.04g06760.1 Hepe04g0676 567814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe04g0676 898 ProSiteProfiles Protein kinase domain profile. 540 814 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe04g0676 898 FunFam FERONIA receptor-like kinase 223 413 - -
Hepe04g0676 898 SUPERFAMILY Protein kinase-like (PK-like) 513 813 IPR011009 -
Hepe04g0676 898 ProSitePatterns Protein kinases ATP-binding region signature. 546 569 IPR017441 GO:0005524(InterPro)
Hepe04g0676 898 FunFam Receptor-like protein kinase FERONIA 617 827 - -
Hepe04g0676 898 SMART serkin_6 540 814 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe04g0676 898 FunFam Receptor-like protein kinase FERONIA 512 616 - -
Hepe04g0676 898 Pfam Malectin-like domain 42 412 IPR024788 -
Hepe04g0676 898 Pfam Protein tyrosine and serine/threonine kinase 545 808 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe04g0676 898 Gene3D Phosphorylase Kinase; domain 1 501 616 - -
Hepe04g0676 898 MobiDBLite consensus disorder prediction 856 891 - -
Hepe04g0676 898 CDD STKc_IRAK 546 812 - -
Hepe04g0676 898 PANTHER OS03G0124300 PROTEIN-RELATED 14 478 IPR045272 GO:0004714(InterPro)|GO:0006468(InterPro)
Hepe04g0676 898 ProSitePatterns Serine/Threonine protein kinases active-site signature. 661 673 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe04g0676 898 Gene3D Transferase(Phosphotransferase) domain 1 617 830 - -
Hepe04g0676 898 FunFam FERONIA receptor-like kinase 39 198 - -
Hepe04g0676 898 Gene3D - 39 199 - -
Hepe04g0676 898 Gene3D - 222 413 - -
Hepe04g0676 898 MobiDBLite consensus disorder prediction 845 898 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0925 Hepe-Chr2:11145804 Hepe04g0676 Hepe-Chr4:60241003 2.88e-262 dispersed
Hepe02g0926 Hepe-Chr2:11156908 Hepe04g0676 Hepe-Chr4:60241003 1.60e-259 dispersed
Hepe02g3204 Hepe-Chr2:81594821 Hepe04g0676 Hepe-Chr4:60241003 5.71e-190 dispersed
Hepe04g0676 Hepe-Chr4:60241003 Hepe04g2056 Hepe-Chr4:75407206 2.54e-203 dispersed
Hepe04g0667 Hepe-Chr4:60103329 Hepe04g0676 Hepe-Chr4:60241003 5.17e-65 proximal
Hepe08g2433 Hepe-Chr8:65123094 Hepe04g0676 Hepe-Chr4:60241003 4.92e-276 transposed
Hepe10g1396 Hepe-Chr10:50345697 Hepe04g0676 Hepe-Chr4:60241003 3.56e-50 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72717 PF12819 Malectin_like 3.50E-39 CL0202 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe04g0676 - - - 0.0