Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe04g0680 ATGACTTCTGGTCAGCCGCTACTGGCTTCATCAGAATCTCCATCAGCTATTGAATACAGATCTCCTTCTCGAAATTTTGGTTCCGTTGGTTATGTATGTCGCAGTGCTTCCTTCAACTCGTCCAGTTACGACAATGCTCAGAGTGACATTGTGGATGTGAAGGAAAACTGCGCCAGCCCTTTTGGAGATAACGGTTGGAGTAGTAGACGTTCCAGTTCTCTTTCTAGGAAGAGGCAGTTTTATACTGTTGACTTTCAGTTTCCTCAGCAGTTTCCTTTTGGCTACCCCACCCAGGATAGAAGACGCCTGGTCTCGTGGGGTGTAATGGAGCTACATAATGTTAATGATGACCCTGCGAGCTTTGAACTTTCTAGGGTCCAGGAGAAGTTGCATAAGGTGCAAAGAAGTCGCCATAAGAGTATGCAGTTTGAAGATAATTTACAGCATGACGATAATCCAAGGTTGATCTACATCAATGATCCAAGGAGAACTAATGACAAGTATGAGTTCACAGGAAATGAGATAACCACTAGCAAGTACACATTGATTACCTTCTTGCCAAAGAACCTCTTTATTCAGTTCCACCGCGTTGCCTATCTTTATTTTCTTGCTATTGCAGCTCTTAACCAGCTTCCACCTTTGGCAGTCTTTGGGAGAACGGTATCTCTTTTTCCCCTCCTGTTTGTGCTCTGTGTTACAGCTATTAAAGATGGCTACGAGGATTGGCGTAGACACAGATCAGATCGCAATGAGAACAATAGACAGGCTCTGGTGCTTCAATCTGATGAATTCCGATTGAAAGTGTGGAAAAAAATACGAGCAGGTGAAGTTGTAAAGATTTGTGCAGATGAGGTCATTCCTTGTGATATGGTTTTATTGGGGACAAGCGATCCTAGTGGCCTTGCTTACATCCAAACAATGAATTTGGATGGTGAGTCAAACTTGAAGACAAGGTATGCTAGGCAGGAAACAGCATCTGCAGTAGCTGAGGGGTGTTCATATTCTGGTCTTATTCGATGTGAACAGCCTAATAGGAACATTTATGAGTTCACTGCCAATATGGAATTCAACGGCCATAAATTTCCCCTCAGCCAGTCAAACATAGTCTTGCGTGGTTGTCAGCTGAAGAACACTGAATGGATTATTGGGGTGGTTGTCTATGCCGGACAAGAGACAAAAGCCATGTTAAACAGTGCAGTGTCTCCTGCCAAGCGAAGTAAACTGGAGGGTTACATGAACAGGGAAACATTGTGGTTGTCAGTCTTCCTATTTGTCATGTGTCTAGTTGTGGCCCTTGGAATGGGTTCTTGGCTCGTTCGCCACAAGGAACGGCTTGACACCTTGCCATATTATAGGAAAAGGTATTTCACAAATGGGGCAGATGATGGTAAGAGGTACAGGTTTTATGGAATACCTATGGAGACCTTTTTCTCCTTTTTGAGTTCTATTATAGTGTTTCAGATTATGATACCGATATCCCTTTATATTACAATGGAGGTGGTGAGACTGGGCCAGTCATATTTCATGATTGAAGATAAGCACATGTACTGCAGAATCTCTTGTTCAAGGTTCCAGTGCAGATCATTGAATATCAATGAGGATCTTGGTCAAGTTCGCTATGTATTTTCGGATAAAACAGGAACACTTACTGAAAATAAAATGGAATTTAAAAGGGCAAGTGTGCATGGGAAAAATTACGGGAACAACTTGTCTGAGGAATATCCATCACCGTTGTGTTCCATTCCAGCAACTTTAGGGAGGAGGAGATGGAAACTTAAATCTGACATTGCTGTTGATACCGAACTTGTCAAATTATTGCACAAGGACCTAAACGGAGATGAAAAGATTGCTGCACATGAATTTTTTCTTACATTGGCTGCATGCAATACTGTAATTCCTATTCTCGTGGATGACAAATCTAGTTATTTGAATGGTGAATTGCACGAGGATGTCGAAACTATTGATTATCAGGGGGAATCCCCTGACGAACAAGCACTAGTTGCTGCAGCCTCTGCTTATGGATATACCCTTTTTGAGCGCACGTCTGGGCATATTGTTATAGATGTCAATGGTGAGAACTTAAGGTTAGATGTTTTGGGTTTACATGAGTTTGATAGTGTTCGCAAAAGGATGTCTGTTGTTATCAGATTCCCCGACAACACTCTAAAGGTGCTGGTAAAAGGTGCTGATACTTCGATGTTGAGTATTTTAGGCAACGACACTAATGGGGAAGAATTTATCAAACATACTACTCAAAGCCATTTGTATGAATATTCAATGGAAGGCTTGCGAACACTTGTAGTTGGTGCCAAAGATCTGAACGATTCTGAATTTGAGCTGTGGCAGAGCAGATATGAGGATGCTAGTACTTCACTGACTGAAAGAGCAGTAAAACTACGTCATACAGCAGCCCTTATAGAATGTGATCTAAAGCTTTTGGGTGCAACTGCTATTGAGGACAAGCTTCAAGATGGTGTACCTGAAGCCATTGAATCTCTTCGGCAGGCGGGAATTAAGGTTTGGATTCTGACTGGAGATAAGCAGGAGACAGCCATATCAATCGGTCTCTCCTGCAAACTGCTGACTTCAGATATGCAGTCAATTATTATCAATGGAAATTCCGAGAATGATTGCAGGCAACTTCTAGCCAATGCTATAGCAAAATATGGTATTAGATCAACACAGTGCAGAAGTCAAAGTCAGAAGCTGAAGAATTGTGAGAATGACTGTAACGATATACCAAAGACATCTAGCATGTCAGATTTTAATGAAGGGGAAGAAGAAGATGTGACTGATAAACCACTAGCTCTCATAATTGATGGAAACAGTTTGGTGTACATTTTGGAGAAGGAATTGGAGTCAGAGCTTTTTGACCTCGCAACTTCATGCAATGTTGTGCTATGTTGTCGTGTTGCACCTCTGCAGAAAGCTGGAATTGTTGATTTGATCAAGAGTAAAACTGATGATATGACATTGGCAATTGGAGATGGGGCCAATGATGTCTCAATGATTCAGATGGCCGATGTAGGCGTTGGTATATGTGGACAGGAAGGGCGTCAAGCAGTAATGGCATCTGATTTTGCCATGGGACAATTTCGCTTTTTAAAAAGATTACTTCTAGTGCATGGACATTGGAACTATCAACGTGTAGGCTACATGGTTCTTTACAACTTCTACCGCAATGCGGTTTTCGTCTTGATGCTCTTCTGGTACATTCTATGCACAGCATTCTCAACAACTTCAGCTTTGACTGATTGGAGTAGTGTGTTTTACTCTGTTATTTATACGTCTATCCCTACTATTTTTGTTGGTGTTCTGGACAAAGGCTTGAGTGACAAAACCCTACTACAATATCCTAAGCTCTATGGTGCTGGCCATAGACAGGAGGCTTACAATTTGCGTCTCTTTTGGTTCACAATGACTGATACCCTGTGGCAGAGTCTTGTTCTCTTCTATGTTCCATTATACATTTACAAGGAGAGTTCCATTGATATATGGAGCTTGGGAAGTTTGTGGACGATAGCGGTTGTTATCCTTGTGAATGTACACTTGGCGATGGATATTCAACGTTGGGTATATATTACACATGCTGCAGTTTGGGGATCCATAGTCATAACATATGCCTGCATGGTGGTGTTGGATTCGATACCCGTTTTTCCTAATTACTGGACAATCTTTCATCTGGCCAAGTCCCCGACCTATTGGTTGACTATATTGCTCATAATAGTTGTAGCATTGCTTCCACGCTATCTTTTTAAAGTTGTGAACCAAAGATTTTGGCCCTCGGATATTCAGATAGCCAGAGAAGCCGAGGTACTGAGAAGACGAAAAGGTCGTGAACTGGTTTCAAAGCGAGATCGAGATTCCAATTAA 3873 41.85 MTSGQPLLASSESPSAIEYRSPSRNFGSVGYVCRSASFNSSSYDNAQSDIVDVKENCASPFGDNGWSSRRSSSLSRKRQFYTVDFQFPQQFPFGYPTQDRRRLVSWGVMELHNVNDDPASFELSRVQEKLHKVQRSRHKSMQFEDNLQHDDNPRLIYINDPRRTNDKYEFTGNEITTSKYTLITFLPKNLFIQFHRVAYLYFLAIAALNQLPPLAVFGRTVSLFPLLFVLCVTAIKDGYEDWRRHRSDRNENNRQALVLQSDEFRLKVWKKIRAGEVVKICADEVIPCDMVLLGTSDPSGLAYIQTMNLDGESNLKTRYARQETASAVAEGCSYSGLIRCEQPNRNIYEFTANMEFNGHKFPLSQSNIVLRGCQLKNTEWIIGVVVYAGQETKAMLNSAVSPAKRSKLEGYMNRETLWLSVFLFVMCLVVALGMGSWLVRHKERLDTLPYYRKRYFTNGADDGKRYRFYGIPMETFFSFLSSIIVFQIMIPISLYITMEVVRLGQSYFMIEDKHMYCRISCSRFQCRSLNINEDLGQVRYVFSDKTGTLTENKMEFKRASVHGKNYGNNLSEEYPSPLCSIPATLGRRRWKLKSDIAVDTELVKLLHKDLNGDEKIAAHEFFLTLAACNTVIPILVDDKSSYLNGELHEDVETIDYQGESPDEQALVAAASAYGYTLFERTSGHIVIDVNGENLRLDVLGLHEFDSVRKRMSVVIRFPDNTLKVLVKGADTSMLSILGNDTNGEEFIKHTTQSHLYEYSMEGLRTLVVGAKDLNDSEFELWQSRYEDASTSLTERAVKLRHTAALIECDLKLLGATAIEDKLQDGVPEAIESLRQAGIKVWILTGDKQETAISIGLSCKLLTSDMQSIIINGNSENDCRQLLANAIAKYGIRSTQCRSQSQKLKNCENDCNDIPKTSSMSDFNEGEEEDVTDKPLALIIDGNSLVYILEKELESELFDLATSCNVVLCCRVAPLQKAGIVDLIKSKTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLVHGHWNYQRVGYMVLYNFYRNAVFVLMLFWYILCTAFSTTSALTDWSSVFYSVIYTSIPTIFVGVLDKGLSDKTLLQYPKLYGAGHRQEAYNLRLFWFTMTDTLWQSLVLFYVPLYIYKESSIDIWSLGSLWTIAVVILVNVHLAMDIQRWVYITHAAVWGSIVITYACMVVLDSIPVFPNYWTIFHLAKSPTYWLTILLIIVVALLPRYLFKVVNQRFWPSDIQIAREAEVLRRRKGRELVSKRDRDSN 1290
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 60310987 60317019 + Hsped.04g06800.1 Hepe04g0680 567818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe04g0680 1290 FunFam Phospholipid-transporting ATPase 809 1034 - -
Hepe04g0680 1290 Pfam Phospholipid-translocating ATPase N-terminal 156 221 IPR032631 -
Hepe04g0680 1290 NCBIfam phospholipid-translocating P-type ATPase 170 1269 IPR006539 GO:0000287(InterPro)|GO:0005524(InterPro)|GO:0015914(InterPro)|GO:0016020(InterPro)|GO:0140326(InterPro)
Hepe04g0680 1290 SFLD Haloacid Dehalogenase 526 1045 - -
Hepe04g0680 1290 SUPERFAMILY Calcium ATPase, transduction domain A 253 394 IPR008250 -
Hepe04g0680 1290 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 548 826 IPR023299 GO:0000166(InterPro)
Hepe04g0680 1290 CDD P-type_ATPase_APLT_Dnf-like 172 1154 - -
Hepe04g0680 1290 Pfam E1-E2 ATPase 253 498 - -
Hepe04g0680 1290 Gene3D - 552 568 IPR023299 GO:0000166(InterPro)
Hepe04g0680 1290 Pfam haloacid dehalogenase-like hydrolase 765 857 - -
Hepe04g0680 1290 Pfam Cation transport ATPase (P-type) 658 735 - -
Hepe04g0680 1290 Pfam Phospholipid-translocating P-type ATPase C-terminal 1022 1262 IPR032630 -
Hepe04g0680 1290 NCBIfam HAD-IC family P-type ATPase 964 1080 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Hepe04g0680 1290 NCBIfam HAD-IC family P-type ATPase 475 565 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Hepe04g0680 1290 Gene3D - 522 538 - -
Hepe04g0680 1290 Gene3D - 539 551 IPR023214 -
Hepe04g0680 1290 SUPERFAMILY Calcium ATPase, transmembrane domain M 170 1261 IPR023298 -
Hepe04g0680 1290 Gene3D - 810 1034 IPR023214 -
Hepe04g0680 1290 SFLD p-type atpase 526 1045 IPR044492 -
Hepe04g0680 1290 FunFam Phospholipid-transporting ATPase 656 800 - -
Hepe04g0680 1290 ProSitePatterns E1-E2 ATPases phosphorylation site. 544 550 IPR018303 -
Hepe04g0680 1290 Gene3D - 655 793 IPR023299 GO:0000166(InterPro)
Hepe04g0680 1290 Gene3D - 232 398 - -
Hepe04g0680 1290 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 145 1270 - GO:0005886(PANTHER)|GO:0045332(PANTHER)|GO:0140326(PANTHER)
Hepe04g0680 1290 SUPERFAMILY HAD-like 537 1040 IPR036412 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0122 Hepe-Chr2:1401928 Hepe04g0680 Hepe-Chr4:60310987 1.27e-173 dispersed
Hepe02g2857 Hepe-Chr2:77650121 Hepe04g0680 Hepe-Chr4:60310987 0.0 dispersed
Hepe04g0680 Hepe-Chr4:60310987 Hepe10g1693 Hepe-Chr10:53626683 5.83e-220 dispersed
Hepe04g0680 Hepe-Chr4:60310987 Hepe02g2152 Hepe-Chr2:58261726 5.32e-205 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe04g0680 K14802 - csv:101206692 2370.89