Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe04g0687 ATGGAAATCGCACAACCAATTGGATATGCTGAAACAGACCCATCTGGTCGCTATGGACGGTTTAGAGAAATTCTAGGTAAAGGAGCCATGAAAACAGTATATGAAGCCTTTGATGAAGTGCTTGGAATAGAAGTGGCTTGGAACCAAGTCCATCTCAAAGATGTCTTCCATTCCCCTGAAGAACTACAACGCCTTTACTCAGAAGTTCATCTCCTCAAGAACCTCAACCATGACTCGATCATCCGATTCTACGCTTCCTGGATCGATACTCATCACCGGACGTTCAACTTCATCACCGAGATGTTCACCTCCGGCACCCTTAGAGAGTACCGACAAAAGTATCGAAAAGTCGATATCGGCGCAATCAAGAACTGGGCTCGTCAAATCCTGCACGGATTGACTTATCTTCATGAACACGATCCTCCCGTAATCCATAGAGACCTCAAATGTGATAACATATTCATCAATGGCCATCTTGGACAAGTTAAAATTGGTGATTTAGGACTGGCAACAATCCTTCATGATTCTCAACATGCCCATAGCGTCATAGGTACACCGGAGTTCATGGCACCAGAGCTGTATGATGAGGAATATAATGAGCTTGTGGATGTTTATTCCTTTGGAATGTGTATGATAGAGATGCTCACTTTGGAGTATCCCTACAGCGAGTGCTCTAACCCTGCTCAGATATATAAGAAAGTCACTTCAGGAAAATTGCCCAATGCATTCTATAAGATCAAAGACTTGGAGGCCCAAAGATTTGTAAAAAAGTGCTTGGAGAATGTTTCAAAGAGGGTGGGTGCTAGAGAGCTCTTGCTTGATCCATTTCTAGCTTCTTCCATTTATAATAATGAAGATCAGTTGTTGTGTTCATCTGTAAGTACTTCACCTGCAACAACACCAGTGCCAAGAAACACAGACATGGCCATTTCTGGATCAATGTATTCCAAAGATGATACAGTTTTCCTCAAAGTTCAGATTAAAGTGAAGGATGGTAATACAGAGAACGTATACTTTTCATTCGACACCATAAACGACACTGCAATCGACGTTGCGACGGAGATGGTAAAAGAGTTGGAAATTATAAGTGACTGGGATCCAATGGAGATAGCTGTGATGATAAAGAAGGAGATATCCACATTGATTCCAGATTGGGAGGAATGGAACTTACCCAAAAAACAGCATCAAGATAGCTTCAACTATGATGACGAAGAGCACGACGACGACGATGACAACGACAATGATGACGACGAAAACAATGTAACCCCACATCCTTTCTACTCTTGCTCCTCTCATGCCTCCTCCTCAAATCTTCAGGCTTTATACTCTTTCTATGACAACCCCCATCATCAATTTGGAGGAATGAATGAGACCTATACTAACACTGAAGAGGATGTTTTCATTGATGATGGTACAAGTTCTAGCTGCTCTCTCAACTCCTTCAATTACTCTAATATAAGCTTTTACTCAAACAATGATGATTATGAGTTTGAATGTGACTCACATGTCAAAGGAAGAGAATCTCATGGCATCTCAACAACCAAGCAAACTACAAGATTTTGCCCCACCATGAAGATAGACGATAAAATGGTGGATCGAGAATTATTCGAGAGACGATATCGATCAAATGACTCGCCTAGACTTACAAGGGTGAAATCGATGGTGAACCTCCGTAGCGAGACATTGTACCGGTCCTTAGTAGAGATGTTGTTGAAGAAGCGATTGTTCAATACGGTGGGGGCAATGGAGAATATTGGATACCAAAAGCCATAG 1773 41.85 MEIAQPIGYAETDPSGRYGRFREILGKGAMKTVYEAFDEVLGIEVAWNQVHLKDVFHSPEELQRLYSEVHLLKNLNHDSIIRFYASWIDTHHRTFNFITEMFTSGTLREYRQKYRKVDIGAIKNWARQILHGLTYLHEHDPPVIHRDLKCDNIFINGHLGQVKIGDLGLATILHDSQHAHSVIGTPEFMAPELYDEEYNELVDVYSFGMCMIEMLTLEYPYSECSNPAQIYKKVTSGKLPNAFYKIKDLEAQRFVKKCLENVSKRVGARELLLDPFLASSIYNNEDQLLCSSVSTSPATTPVPRNTDMAISGSMYSKDDTVFLKVQIKVKDGNTENVYFSFDTINDTAIDVATEMVKELEIISDWDPMEIAVMIKKEISTLIPDWEEWNLPKKQHQDSFNYDDEEHDDDDDNDNDDDENNVTPHPFYSCSSHASSSNLQALYSFYDNPHHQFGGMNETYTNTEEDVFIDDGTSSSCSLNSFNYSNISFYSNNDDYEFECDSHVKGRESHGISTTKQTTRFCPTMKIDDKMVDRELFERRYRSNDSPRLTRVKSMVNLRSETLYRSLVEMLLKKRLFNTVGAMENIGYQKP 590
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 60420509 60427592 + Hsped.04g06870.1 Hepe04g0687 567825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe04g0687 590 MobiDBLite consensus disorder prediction 402 417 - -
Hepe04g0687 590 MobiDBLite consensus disorder prediction 397 426 - -
Hepe04g0687 590 Pfam Protein kinase domain 23 277 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe04g0687 590 FunFam probable serine/threonine-protein kinase WNK9 102 282 - -
Hepe04g0687 590 Gene3D Transferase(Phosphotransferase) domain 1 102 283 - -
Hepe04g0687 590 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 8 581 IPR050588 GO:0004674(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0035556(PANTHER)
Hepe04g0687 590 SMART serkin_6 19 277 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe04g0687 590 FunFam Probable serine/threonine-protein kinase WNK1 4 100 - -
Hepe04g0687 590 ProSitePatterns Serine/Threonine protein kinases active-site signature. 143 155 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe04g0687 590 ProSiteProfiles Protein kinase domain profile. 19 277 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe04g0687 590 Gene3D Phosphorylase Kinase; domain 1 6 100 - -
Hepe04g0687 590 Gene3D - 318 388 - -
Hepe04g0687 590 SUPERFAMILY Protein kinase-like (PK-like) 21 278 IPR011009 -
Hepe04g0687 590 CDD STKc_WNK 17 277 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g0687 Hepe-Chr4:60420509 Hepe07g2195 Hepe-Chr7:66352175 3.55e-142 dispersed
Hepe08g0683 Hepe-Chr8:6155648 Hepe04g0687 Hepe-Chr4:60420509 3.88e-203 transposed
Hepe04g0687 Hepe-Chr4:60420509 Hepe04g1186 Hepe-Chr4:67126183 8.42e-11 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72720 PF00069 Pkinase 5.10E-49 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe04g0687 K08867 - csv:101207665 904.82