Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe04g0695 ATGGAGAACAAAGGGGCAGTCTTGATGCAACGGTATGAATTAGGAAGGCTGTTGGGGCAGGGAACCTTTGCCAAGGTTTACTATGCTAGAGACATTAAAACTGGCTTGAGTGTGGCTATTAAAGTTATTGACAAAGAGAAGATCTTTAAGGTTGGGATGATTGATCAAATAAAGAGGGAGATCTCGGTGATGAGACTAGTTAAGCATCCCAATGTAGTTGAGCTGTATGAGGTTATGGCAAGCAAAACTAAAATTTACTTTGTCATGGAATATGTCAAAGGCGGTGAGCTATTCAACAAGGTATCCAAAGGAAAGCTTAAAGAATCTGTTGCGCGGAAATATTTTTGGCAGCTGATCAGCGCTGTCGATTACTGCCACAGTAGAGGGGTATGCCATCGAGACTTGAAACCGGAAAATTTACTATTGGATGAATATGGTAATCTGAAGGTTTCCGACTTTGGGTTGAGTGCTCTTGCTGAATCCAAATGCCAAGATGGATTGCTCCATACTACCTGTGGTACACCTGCTTATGTCGCTCCAGAAGTCATTAACAGGAGAGGTTATGATGGATGCAAAGCTGATATTTGGTCGTGTGGAGTAATCTTATTCGTTCTATTAGCTGGTTATCTCCCATTCCACGATCCAAATCTAATGGAGATGTATAAGAAGATTGGAAAAGGAGAATTTAAATTCCCCAACTGGTTTACACCGGAGGTGCGCAAGCTATTGTCGAAGATTTTGGATCCTAATCCAAATACCAGGATATCTATTGCCAAAATAATGGGAAGTTATTGGTTAAAGAAGAGGGGGTTGAATGTGAAACCCCAAATTAACGTAGAAGAAGTGAAAGAAGGTGCTCCTTTAGACGACCTTGATGCAATTTTTGTGTCTACAACCGAGGACAGAGAGTCTGTTAGAGAGCTGAAGCAAGAAGCGGAAAAGCCATTGAATTTGAATGCTTTCGACATAATCTCCTTGTCAGCAGGTTTCGACTTGTCAGGTTTGTTTGAGGAGACTGATCAAAAGAAAGAAGTAAGATTCACATCGGACAAGCCTGCATCCACCATCATCTCCAAACTGCAAGACATTGCAAAGTCCTTGAAATTGAAAATCAAGAAGAAAGACAGAGGCCTATTGAAGATCGAAGGGTGTAATGAAGGTCGAAAAGGAGCAGTATGCATCGATGCAGAGATTTTCGAGGTTACCCCATCACTCCATATTGTGGAAATGAAGAAATCAAATGGAGATACTTTGGAATATCGCAAGATAATGAAAGACGATATAAGACCTGCTCTGAAGGATATTGTCTGGACTTGGCAAGGCGAGGAGCAACAGCAACAACAGTCTCCTATTTCGCCGGTTACTACTACAACTAATGTATTGCATTATAACACAGGAGGACTGGTGGATGCATCTTAG 1419 41.51 MENKGAVLMQRYELGRLLGQGTFAKVYYARDIKTGLSVAIKVIDKEKIFKVGMIDQIKREISVMRLVKHPNVVELYEVMASKTKIYFVMEYVKGGELFNKVSKGKLKESVARKYFWQLISAVDYCHSRGVCHRDLKPENLLLDEYGNLKVSDFGLSALAESKCQDGLLHTTCGTPAYVAPEVINRRGYDGCKADIWSCGVILFVLLAGYLPFHDPNLMEMYKKIGKGEFKFPNWFTPEVRKLLSKILDPNPNTRISIAKIMGSYWLKKRGLNVKPQINVEEVKEGAPLDDLDAIFVSTTEDRESVRELKQEAEKPLNLNAFDIISLSAGFDLSGLFEETDQKKEVRFTSDKPASTIISKLQDIAKSLKLKIKKKDRGLLKIEGCNEGRKGAVCIDAEIFEVTPSLHIVEMKKSNGDTLEYRKIMKDDIRPALKDIVWTWQGEEQQQQQSPISPVTTTTNVLHYNTGGLVDAS 472
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 60664754 60668045 - Hsped.04g06950.1 Hepe04g0695 567833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe04g0695 472 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe04g0695 472 ProSiteProfiles NAF domain profile. 313 337 IPR018451 GO:0007165(InterPro)
Hepe04g0695 472 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe04g0695 472 SMART serkin_6 12 266 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe04g0695 472 FunFam Non-specific serine/threonine protein kinase 313 437 - -
Hepe04g0695 472 SUPERFAMILY Protein kinase-like (PK-like) 8 267 IPR011009 -
Hepe04g0695 472 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 4 426 - GO:0004674(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER)
Hepe04g0695 472 Pfam NAF domain 315 373 IPR004041 GO:0007165(InterPro)
Hepe04g0695 472 FunFam Non-specific serine/threonine protein kinase 3 91 - -
Hepe04g0695 472 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524(InterPro)
Hepe04g0695 472 Gene3D Transferase(Phosphotransferase) domain 1 4 320 - -
Hepe04g0695 472 CDD CIPK_C 319 433 - -
Hepe04g0695 472 FunFam Non-specific serine/threonine protein kinase 2 291 - -
Hepe04g0695 472 CDD STKc_SnRK3 11 265 - -
Hepe04g0695 472 Gene3D Kinase associated domain 1, KA1 321 438 - -
Hepe04g0695 472 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g0239 Hepe-Chr3:3044734 Hepe04g0695 Hepe-Chr4:60664754 4.39e-129 dispersed
Hepe04g0695 Hepe-Chr4:60664754 Hepe08g0685 Hepe-Chr8:6177260 2.99e-213 dispersed
Hepe08g0881 Hepe-Chr8:7993335 Hepe04g0695 Hepe-Chr4:60664754 1.07e-35 dispersed
Hepe04g0692 Hepe-Chr4:60565146 Hepe04g0695 Hepe-Chr4:60664754 5.96e-132 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72722 PF00069 Pkinase 2.50E-74 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe04g0695 K07198 - csv:116406388 791.186