Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe04g0753 ATGGCTTCTAACTCCCAAGCAGAGCCTTGGCTAATGGAAAACGGAACCGTCAAGCGTTTAACCAAAGACCATCGACATGGCCATGGCCGCACCGCCCACAACATGTCGTCTTCTTCCTTACGTAAGAAGTCCGATCTAACCCTCGTCTCCAAAGTACGATTTGGCTGTCTCCGCAAGTTTCTCATCAATCTCCAGGAGGTCATTTTGGGAACTAAACTTTCCATTCTCTTCCCTGCTATTCCGCTCGCTATTGTCGCTAACAGTTTTAGCTTTGGAAGACCTTGGATTTTTGCATTGAGCTTGCTTGGCCTCACGCCATTGGCTGAACGTGTCAGTTTTCTGACCGAACAAATCGCTTATTTCACTGGTCCAACAGTTGGGGGACTTTTGAATGCAACATGTGGAAATGCAACGGAGTTGATAATTGCAATTCTTGCACTTACACAAAGAAAGATAGACGTGGTGAAATATTCTCTATTGGGTTCTGTTCTTTCAAACCTTCTTCTTGTTCTTGGAACTTCTCTCTTTTGTGGTGGCATTGCAACTCCCGGTGGGGTGCAAACTTATGACAGAAGACAAGCCGACGTCAACGCACTGATGCTGATGCTTTCATTACTGTGCCATTTATTGCCCTTGTTGTTTGGCTACGCCGCCACCTCCGCCTCCGCTGCCACCGCCGCCGCCTCCACCCTCCACCTGTCCAGAGCCAGCAGCATCGTAATGCTATGCGCTTACATTGCTTACTTGGTGTTCCAACTTTGGACTCATCGAGAATTATTCGAAGCCGAGGAAGCTGAAGACGACGACGTTCCTGGAGAAGAGGCAGTGATTGGATTCTGGAGTGCATTTGCATGGCTTATAGGAATGACTCTCATTATTGCTTTGCTGTCCGAATACGTTGTCAACACAATTGAGGAAGCATCAACTACTTGGGGTTTGTCAGTGAGTTTCCTTAGCATAATTTTGCTTCCTATAGTTGGAAATGCAGCCGAACACGCCGGAGCTATCATATTTGCTTTCAAGAATAAGTTGGACATATCTTTGGGGGTTGCTTTGGGGTCTGCAACACAAATTGCACTATTTGTGATACCATTGTGTGTGATAGTTGCTTGGACAATGGGAGTGGACATGGATCTGAATTTCAACCTCATGGAAACAGGCTCACTTGGATTGGCCATTATTGCCACAGCCTTCACTTTACAAGATGGAACCTCTCACTATATTAAAGGACTTGTTCTTCTTCTCTGCTACATTATCATTGCTGCTTGCTTCTTTGTCTCCAAGACACAAGAAGATGATAACAATCCCCCCAACTTGGGACTCCAATCTTCAAACCAAGCAATCTTCAGAGCTTAA 1356 45.8 MASNSQAEPWLMENGTVKRLTKDHRHGHGRTAHNMSSSSLRKKSDLTLVSKVRFGCLRKFLINLQEVILGTKLSILFPAIPLAIVANSFSFGRPWIFALSLLGLTPLAERVSFLTEQIAYFTGPTVGGLLNATCGNATELIIAILALTQRKIDVVKYSLLGSVLSNLLLVLGTSLFCGGIATPGGVQTYDRRQADVNALMLMLSLLCHLLPLLFGYAATSASAATAAASTLHLSRASSIVMLCAYIAYLVFQLWTHRELFEAEEAEDDDVPGEEAVIGFWSAFAWLIGMTLIIALLSEYVVNTIEEASTTWGLSVSFLSIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQIALFVIPLCVIVAWTMGVDMDLNFNLMETGSLGLAIIATAFTLQDGTSHYIKGLVLLLCYIIIAACFFVSKTQEDDNNPPNLGLQSSNQAIFRA 451
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 61536010 61543219 + Hsped.04g07530.1 Hepe04g0753 567891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe04g0753 451 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 23 429 IPR004713 GO:0006812(InterPro)|GO:0006874(PANTHER)|GO:0008324(InterPro)|GO:0009705(PANTHER)|GO:0015369(PANTHER)|GO:0016020(InterPro)|GO:0070588(PANTHER)
Hepe04g0753 451 FunFam Vacuolar cation/proton exchanger 124 270 - -
Hepe04g0753 451 Pfam Sodium/calcium exchanger protein 95 254 IPR004837 GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe04g0753 451 Pfam Sodium/calcium exchanger protein 282 425 IPR004837 GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe04g0753 451 Gene3D - 124 276 IPR044880 -
Hepe04g0753 451 Gene3D - 277 426 IPR044880 -
Hepe04g0753 451 NCBIfam calcium/proton exchanger 78 425 IPR004798 GO:0006816(InterPro)|GO:0015369(InterPro)
Hepe04g0753 451 FunFam Vacuolar cation/proton exchanger 271 426 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g1586 Hepe-Chr2:21052748 Hepe04g0753 Hepe-Chr4:61536010 3.52e-106 transposed
Hepe06g0649 Hepe-Chr6:49068851 Hepe04g0753 Hepe-Chr4:61536010 4.21e-111 transposed
Hepe08g0368 Hepe-Chr8:3303315 Hepe04g0753 Hepe-Chr4:61536010 1.32e-107 transposed
Hepe10g1320 Hepe-Chr10:49113599 Hepe04g0753 Hepe-Chr4:61536010 1.19e-118 wgd
Hepe04g0753 Hepe-Chr4:61536010 Hepe05g0092 Hepe-Chr5:989793 5.35e-161 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe04g0753 K07300 - csv:101213857 766.533