Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe04g0768 ATGGCCACCGCCACCGCCGCCGCAACCTCCTCCTTCATCGGAACCCGCCTCGCCGACGTGCGGCCGAGTTCCGGCCGAGTCCAAGCCCGCTTCTCATTCGGAAAGAAGAAAAGTCCGGCGAAGAAATCGCCGTCGAAGAAGACGATTCCCGACCGGCCGCTGTGGTTTCCGGGAGCGAAGGCGCCGGAATGGCTAGACGGAAGCCTGATCGGCGACTACGGGTTCGATCCGTTCGGGTTGGGGAAACCGGCGGAGTATTTGCAGTACGATCTGGACTCGTTGGATCAGAACTTGGCGAAGAATGTGGCCGGAGATATAATCGGAACGAGATTCGAGAGCGCGGAGGTGAAATCGACGCCGTTTCAGCCGTATACGGAGGTTTTCGGGTTGCAGAGATTTCGTGAGTGCGAGCTGATCCATGGAAGGTGGGCCATGTTGGCTACACTCGGCGCTCTCTCTGTTGAATGGCTCACCGGTATCACTTGGCAAGACGCTGGAAAAGTAGAATTAGTGGAAGGGTCATCCTACCTTGGGCAGCCCCTCCCGTTCTCCATAACGACATTGATCTGGATCGAAGTATTGGTGATCGGATACATCGAGTTTCAAAGGAATGCGGAGCTGGAGCCGGAGAAGAGGTTGTACCCAGGAGGTAAGTTCTTCGACCCATTGGGGTTGGCCGAGGATCCCGAGAAGAAAGCCATCCTACAATTGGCTGAGATCAAGCACGCTCGCCTCGCCATGGTTGCCTTCCTCGGCTTTGCTGTTCAAGCTGCTGTCACCGGCAAAGGCCCCCTCAACAACTGGGCAACTCATCTTAGTGACCCGCTCCACACCACCATTATTGACAACTTCTCCTCCTCTTCTTAA 867 56.17 MATATAAATSSFIGTRLADVRPSSGRVQARFSFGKKKSPAKKSPSKKTIPDRPLWFPGAKAPEWLDGSLIGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGITWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQRNAELEPEKRLYPGGKFFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSSSS 288
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 61689577 61691979 - Hsped.04g07680.1 Hepe04g0768 567906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe04g0768 288 SUPERFAMILY Chlorophyll a-b binding protein 48 285 - -
Hepe04g0768 288 MobiDBLite consensus disorder prediction 31 52 - -
Hepe04g0768 288 Gene3D Chlorophyll a/b binding protein domain 55 288 - -
Hepe04g0768 288 Pfam Chlorophyll A-B binding protein 61 257 IPR022796 -
Hepe04g0768 288 FunFam Chlorophyll a-b binding protein, chloroplastic 110 286 - -
Hepe04g0768 288 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 5 281 IPR001344 GO:0009416(PANTHER)|GO:0009535(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0009941(PANTHER)|GO:0010287(PANTHER)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g0768 Hepe-Chr4:61689577 Hepe06g0214 Hepe-Chr6:7695887 2.53e-35 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe04g0768 K08915 - csv:101208740 547.74