Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe04g0798 ATGGGTGAAGAAGAATTGCAGGTGTTTGGTTTCTGGGCAAGTCCCTTTAGTCTCAGAGTAGAGTTAGCTCTCAAACTCAAAGGCGTGGATTACAAATACATTGAGGAAGATTTGCACAATAAGAGCGATTTGCTTCTTCAATACAACCCAATTTACAAGAAAGTTCCTGTTCTTGTCCACCATGGCAAACCCATTTCAGAGTCTGTTGTAATCCTGGAATACATCGAAGATAAGTGGAGAGACAACCCCATCTTCCCCGAAGATCCCTATCAAAGAGCTCTTGCCAGGTTTTGGGCTAAGTATATTGATGACAAGGTATTGTCGTCGGCAGTAGTGAAAGCAGCTCGAAGCAGAGGAGAAGAGAGAGAGAAGGGTGTAGAAGAAGCAAGGGAGGCGTTAGAAGCACTAGAGAAGGAGCTTGAAAACAAGAGGTTTTTTGGAGGACAGAAAATTGGGTTTGTGGACATTGTTGGCTTGTTCGTAGCCTACTGGGTTCCTGCCATTGAACAAGGTTTTGGGTTTGAGCTGCTCACGACTAACAAATTTCCAAACTTGACCAAATGGTGTGAAGAACTTCTGAACCATAGCGTAGTGAGAGAGAGTCTGCCTCCAAAAGATAAACTTGTGGCCCATATCCAAGCTGTTCTTTGA 651 43.93 MGEEELQVFGFWASPFSLRVELALKLKGVDYKYIEEDLHNKSDLLLQYNPIYKKVPVLVHHGKPISESVVILEYIEDKWRDNPIFPEDPYQRALARFWAKYIDDKVLSSAVVKAARSRGEEREKGVEEAREALEALEKELENKRFFGGQKIGFVDIVGLFVAYWVPAIEQGFGFELLTTNKFPNLTKWCEELLNHSVVRESLPPKDKLVAHIQAVL 216
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 62015348 62017087 + Hsped.04g07980.1 Hepe04g0798 567936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe04g0798 216 Gene3D Glutaredoxin 1 87 - -
Hepe04g0798 216 SFLD Main.3: Omega- and Tau-like 2 214 IPR045073 -
Hepe04g0798 216 CDD GST_C_Tau 89 214 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
Hepe04g0798 216 SUPERFAMILY Thioredoxin-like 6 105 IPR036249 -
Hepe04g0798 216 SFLD Glutathione Transferase (cytosolic) 2 214 IPR040079 -
Hepe04g0798 216 FunFam Tau class glutathione S-transferase 85 216 - -
Hepe04g0798 216 FunFam Tau class glutathione S-transferase 1 87 - -
Hepe04g0798 216 CDD GST_N_Tau 6 79 - -
Hepe04g0798 216 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 212 IPR010987 -
Hepe04g0798 216 SUPERFAMILY GST C-terminal domain-like 77 214 IPR036282 -
Hepe04g0798 216 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Hepe04g0798 216 Pfam Glutathione S-transferase, N-terminal domain 5 76 IPR004045 -
Hepe04g0798 216 Coils Coil 119 146 - -
Hepe04g0798 216 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 5 213 IPR045073 GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)
Hepe04g0798 216 Gene3D - 88 216 - -
Hepe04g0798 216 Pfam Glutathione S-transferase, C-terminal domain 112 194 IPR004046 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g0798 Hepe-Chr4:62015348 Hepe04g0807 Hepe-Chr4:62111140 3.38e-106 dispersed
Hepe04g0798 Hepe-Chr4:62015348 Hepe04g0799 Hepe-Chr4:62020950 5.19e-116 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe04g0798 K00799 - csv:101215228 286.189