Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe04g0799 ATGGCTGAAGAATTGCAGGTGTTTGGTTTCTGGGCAAGTCCCTTCAGTCGCAGAGTGGAGCTGGCTCTCAAACTCAAAGCCGTGGATTACCAATACATTGGTGAAGATTTGCCCTACAACAAAAGCGATTCACTTCTCAAATACAACCCTATTTACAAGAAGGTGCCTGTTCTCCTCCACCATGGCCAACCCATTTCAGAGTCTCTTGTCATCCTCGAATACATCGAAGAAAATTGGAGAGACAATCCCATTTTGCCCCAAGATCCCCATCAAAGAGCTATTTCCAGGTTCTGGGCTAAGTATATCGATGACAAGGTTCTACTAGCGGTACTGAAAGCTGTCCGAAGCAAAGGAGAAGAGAGAGAGAAGGGTGTAGAAGAAGCAAGGGAGACATTAGAAGCACTTGAGAAAGAGCTTGAAAACAAGTTGTTCTTTGGAGGAGACAGAATTGGGTTTGTTGACATTGTTGCCCTTCTTGTAGCCTACTGGGTTCCTGCCTTGGAAGAAGGCTTTGAGTTTGAGCTGCTGAGAAGTAATAAATTTCCAAACTTGAGCAAATGGAGTCAACAACTTTTGAACCACAGCGTAGTCAAAGAGATTCTGCCTCCAAAAGATGAGCTTGTGTTCGGTTTCTGGGAAAGTCCATTTAGTTGCAGAGTGGAATTGGCTCTGAAACTCAAAGCCGTTCATTACGAATACATTGGTGAAGATTTGCCCTTCAACAAGAGCGATTTGCTTCTCAAATACAACCCAATTTACAAGAAAGTTCCTGTTCTGGTCCACCATGGCAGACCCATTTCAGAGTCTGTTGTAATCCTGGAATACATCGATGAAAATTGGAGAGACAACCCCATCTTGCCCCAACATCCCCATCAAAGAGCTCTTGCCAGGTTCTGGGCTAAGTATATTGATGACAAGGTTGTGTCGGCGGTAGTGAAGGCTGCTGGGAGCAAAGGAGAAGAGAGAGAGAAGGGTGTAGAAGAAGCAGGGGAGACATTAGAAGCACTTGAGAAAGAGCTTGAAAACAAGTTGTTCTTCGGAGGAGACAGAATTGGGTTTGTTGACATTGTTGCCATTGTCGTAGCCCACTGGGTTCCTGCCATTCAAGAATGCTTTGGGTTTCAGCTGCTCACAATTAACAAGTTTCCTAACTTAATCAAATGGAGGGAAGTGCTTGTGAACCACAGCGTGGTGAAGGAGATTCTGCCTCCAAACCATGAGATTGTTGCCTTTATGCAAGCTAATTGGAAATTTTCAAATTAG 1263 44.42 MAEELQVFGFWASPFSRRVELALKLKAVDYQYIGEDLPYNKSDSLLKYNPIYKKVPVLLHHGQPISESLVILEYIEENWRDNPILPQDPHQRAISRFWAKYIDDKVLLAVLKAVRSKGEEREKGVEEARETLEALEKELENKLFFGGDRIGFVDIVALLVAYWVPALEEGFEFELLRSNKFPNLSKWSQQLLNHSVVKEILPPKDELVFGFWESPFSCRVELALKLKAVHYEYIGEDLPFNKSDLLLKYNPIYKKVPVLVHHGRPISESVVILEYIDENWRDNPILPQHPHQRALARFWAKYIDDKVVSAVVKAAGSKGEEREKGVEEAGETLEALEKELENKLFFGGDRIGFVDIVAIVVAHWVPAIQECFGFQLLTINKFPNLIKWREVLVNHSVVKEILPPNHEIVAFMQANWKFSN 420
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 62020950 62027589 + Hsped.04g07990.1 Hepe04g0799 567937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe04g0799 420 SUPERFAMILY Thioredoxin-like 208 307 IPR036249 -
Hepe04g0799 420 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 204 284 IPR004045 -
Hepe04g0799 420 Coils Coil 118 145 - -
Hepe04g0799 420 Pfam Glutathione S-transferase, C-terminal domain 302 393 IPR004046 -
Hepe04g0799 420 Pfam Glutathione S-transferase, C-terminal domain 97 193 IPR004046 -
Hepe04g0799 420 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 289 418 IPR010987 -
Hepe04g0799 420 SUPERFAMILY GST C-terminal domain-like 278 417 IPR036282 -
Hepe04g0799 420 SFLD Glutathione Transferase (cytosolic) 208 414 IPR040079 -
Hepe04g0799 420 Gene3D - 85 210 - -
Hepe04g0799 420 Gene3D - 286 419 - -
Hepe04g0799 420 CDD GST_C_Tau 89 208 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
Hepe04g0799 420 Pfam Glutathione S-transferase, N-terminal domain 4 76 IPR004045 -
Hepe04g0799 420 Pfam Glutathione S-transferase, N-terminal domain 208 278 IPR004045 -
Hepe04g0799 420 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
Hepe04g0799 420 CDD GST_C_Tau 290 414 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
Hepe04g0799 420 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 216 IPR010987 -
Hepe04g0799 420 FunFam Tau class glutathione S-transferase 203 288 - -
Hepe04g0799 420 FunFam Tau class glutathione S-transferase 286 419 - -
Hepe04g0799 420 SUPERFAMILY GST C-terminal domain-like 77 208 IPR036282 -
Hepe04g0799 420 SFLD Main (cytGST) 2 208 - -
Hepe04g0799 420 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 83 IPR004045 -
Hepe04g0799 420 FunFam Glutathione S-transferase GSTU6 1 85 - -
Hepe04g0799 420 CDD GST_N_Tau 5 79 - -
Hepe04g0799 420 Gene3D Glutaredoxin 1 84 - -
Hepe04g0799 420 Gene3D Glutaredoxin 211 285 - -
Hepe04g0799 420 CDD GST_N_Tau 208 280 - -
Hepe04g0799 420 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 208 413 IPR045073 GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)
Hepe04g0799 420 FunFam Tau class glutathione S-transferase 85 217 - -
Hepe04g0799 420 SFLD Main.3: Omega- and Tau-like 208 414 IPR045073 -
Hepe04g0799 420 SFLD Main.3: Omega- and Tau-like 2 208 IPR045073 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g0799 Hepe-Chr4:62020950 Hepe04g0807 Hepe-Chr4:62111140 3.00e-189 dispersed
Hepe04g0798 Hepe-Chr4:62015348 Hepe04g0799 Hepe-Chr4:62020950 5.19e-116 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe04g0799 K00799 - csv:105435246 300.827