Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe04g0807 ATGGAGGAACAATTGCAGGTGTTGGGTGCGTGGGTAAGTCCCTTTAGTCGTAAAGTGGAGTTGGCTCTGAAACTCAAAGCCCTAAGATACCAATATATTGAGGAAGACTTAAACAACAAGAGCGATTTGCTTCTCAAATACAACCCTATTTACAAGAAGATTCCTGTCCTCCTCCACAATGGACAACCCATTGCAGAGTCACTTATCATCCTCCAATACATTGATGAAATTTGGAAAACCAACCCCATCTTGCCCCAACATCCCCATGATAGAGCTCGAGCAAGGTTCTGGGCTAAGTATATCGATCACAAGTTCTTTCGTGCATGGGTGAAGGCTGCTCGAAGTCAAAGAGAAGAGAGACAAAATGCTATAGAGGAAGCATGTAAGGTGTTGGAACCACTCGAGAATGAGCTGAAAAGCAACAAATTCTTTGGAGGAGACAACATTGGGTTTGTGGACATTGTTGGCATCTTTTTAGGCTGCTGGGTTCCTATCATGCAAAAAGCTCTTGGGTTCGAGATTCTGAGCAGCCACAGGACTCTACTAAGTGGTAACACGATGTACAGAGTCGGACACCTGCCCATGTGCTGGAAGATTGAGAAAGAAATGGCAGAACAAGTGCAGGTGTTAGGTAACCGGTTTAGTCCTTTCAGTCGGCGAGTGGAGTTGGCTCTCAAACTCAAAGGCCTAAGCTACCAATATATTGAGGAAAGATTGCCCATAAAGAGCAAATTACTTTTCAAATACAATCCAGTTTACAAAAAGGTGCCTGTGCTCGTCCACAATGGAACACCAATTGCAGAGTCTCTTGTCATCCTCGAATACATTGATGAAAACTGGAAAACCAACCCCATCCTCCCCCATAATCCCCATGAAAGAGCTCAAGCAAGATTCTGGGCCAAGTTTATTGACGACAAGGTTTTTTCTGCGTGGTGGAAAGCCGCTCGAAGTGAAAGTGAAGGGAGAGAGAAGGCTATAGAGGAAGCGTGCAAGGTGTTGGAACCACTTGAGAAAGAGCTTAAAAGCAACAAGTTCTTTGGAGGAGAGAGCATTGGGTTCGTGGACATTGTTGGCACATTTGTGGGCCACTGGGTTCCTGTGATGGAAGAAGCTCTTGGGTTTCAGATTCTGAGCAGCCACAGGTTTCCAAAACTAACCAAATGGAGTCAAGAGCTTGTGAGCCACAGCGTTGTGAAGGCGGTGTTTGGTTTCTGGGCAAGTCCCTTTAGTCTCAGAGTAGAGTTAGCTCTCAAACTCAAAGGCGTTGATTACCAATACATTGAAGAAGATGTAATTAACAACAAGAGCGATTTGCTTCTCAAATACAACCCTATTTACAAGAAGGTTCCTGTTCTCCTCCACCATGGCAAACCCATTTCAGAGTCTCTTGTCATCCTCGAATACATCGAAGATAACTGGACAGACAACCCCATCTTCCCCGAAGATCCTTATGAAAGAGCTCTCGCCAGGTTTTGGGCTTCTTATATTGATGGCAAGGTTGCGTTAGCGGTACTGAAAGCCGCTAAAAGCAAAGGAGAGGAGATGGAGAAGGCGGTCGGAGAAGTGCAGGAGGCGTTGGAACCACTTGAGAAAGAGCTTAAAAGCAAGAAGTTCTTTGGAGGAGAGAGCATTGGGTTTGTGGACATTGTTGGCACCATGGTAGCCTACTGGGTTCCTGCCATTGAAGAAGCTTTAGGGATTGAGCTGCTAAGAAGCCACAAGTTTCCAAACCTAAGAAAATGGAGTCGAGAGCTTTCCAACCACAACATGGTGAAGGAGTTTCTGCCTAAAAAGGAAGAGCTTGTTCCCTATTTGCAAGCTATTTTTAAGAAAAACTAG 1839 45.08 MEEQLQVLGAWVSPFSRKVELALKLKALRYQYIEEDLNNKSDLLLKYNPIYKKIPVLLHNGQPIAESLIILQYIDEIWKTNPILPQHPHDRARARFWAKYIDHKFFRAWVKAARSQREERQNAIEEACKVLEPLENELKSNKFFGGDNIGFVDIVGIFLGCWVPIMQKALGFEILSSHRTLLSGNTMYRVGHLPMCWKIEKEMAEQVQVLGNRFSPFSRRVELALKLKGLSYQYIEERLPIKSKLLFKYNPVYKKVPVLVHNGTPIAESLVILEYIDENWKTNPILPHNPHERAQARFWAKFIDDKVFSAWWKAARSESEGREKAIEEACKVLEPLEKELKSNKFFGGESIGFVDIVGTFVGHWVPVMEEALGFQILSSHRFPKLTKWSQELVSHSVVKAVFGFWASPFSLRVELALKLKGVDYQYIEEDVINNKSDLLLKYNPIYKKVPVLLHHGKPISESLVILEYIEDNWTDNPIFPEDPYERALARFWASYIDGKVALAVLKAAKSKGEEMEKAVGEVQEALEPLEKELKSKKFFGGESIGFVDIVGTMVAYWVPAIEEALGIELLRSHKFPNLRKWSRELSNHNMVKEFLPKKEELVPYLQAIFKKN 612
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 62111140 62131226 - Hsped.04g08070.1 Hepe04g0807 567945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe04g0807 612 CDD GST_C_Tau 483 608 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
Hepe04g0807 612 Gene3D - 479 612 - -
Hepe04g0807 612 Gene3D - 286 399 - -
Hepe04g0807 612 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 397 477 IPR004045 -
Hepe04g0807 612 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 205 284 IPR004045 -
Hepe04g0807 612 Gene3D - 84 205 - -
Hepe04g0807 612 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 87 217 IPR010987 -
Hepe04g0807 612 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 482 605 IPR010987 -
Hepe04g0807 612 SUPERFAMILY Thioredoxin-like 6 106 IPR036249 -
Hepe04g0807 612 CDD GST_N_Tau 207 280 - -
Hepe04g0807 612 SUPERFAMILY GST C-terminal domain-like 76 176 IPR036282 -
Hepe04g0807 612 CDD GST_C_Tau 88 175 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
Hepe04g0807 612 SUPERFAMILY GST C-terminal domain-like 471 610 IPR036282 -
Hepe04g0807 612 SUPERFAMILY Thioredoxin-like 401 499 IPR036249 -
Hepe04g0807 612 SFLD Main.3: Omega- and Tau-like 203 401 IPR045073 -
Hepe04g0807 612 SFLD Main.3: Omega- and Tau-like 2 179 IPR045073 -
Hepe04g0807 612 SFLD Main.3: Omega- and Tau-like 401 611 IPR045073 -
Hepe04g0807 612 SFLD Glutathione Transferase (cytosolic) 203 401 IPR040079 -
Hepe04g0807 612 SFLD Glutathione Transferase (cytosolic) 401 611 IPR040079 -
Hepe04g0807 612 SFLD Glutathione Transferase (cytosolic) 2 179 IPR040079 -
Hepe04g0807 612 SUPERFAMILY Thioredoxin-like 207 307 IPR036249 -
Hepe04g0807 612 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Hepe04g0807 612 FunFam Tau class glutathione S-transferase 1 86 - -
Hepe04g0807 612 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 401 606 IPR045073 GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)
Hepe04g0807 612 FunFam Tau class glutathione S-transferase 394 481 - -
Hepe04g0807 612 Gene3D Glutaredoxin 1 83 - -
Hepe04g0807 612 Gene3D Glutaredoxin 206 285 - -
Hepe04g0807 612 Gene3D Glutaredoxin 400 478 - -
Hepe04g0807 612 Pfam Glutathione S-transferase, C-terminal domain 110 171 IPR004046 -
Hepe04g0807 612 Pfam Glutathione S-transferase, C-terminal domain 299 394 IPR004046 -
Hepe04g0807 612 Pfam Glutathione S-transferase, C-terminal domain 500 588 IPR004046 -
Hepe04g0807 612 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 289 409 IPR010987 -
Hepe04g0807 612 SUPERFAMILY GST C-terminal domain-like 278 402 IPR036282 -
Hepe04g0807 612 Pfam Glutathione S-transferase, N-terminal domain 4 76 IPR004045 -
Hepe04g0807 612 Pfam Glutathione S-transferase, N-terminal domain 206 278 IPR004045 -
Hepe04g0807 612 Pfam Glutathione S-transferase, N-terminal domain 401 470 IPR004045 -
Hepe04g0807 612 FunFam Tau class glutathione S-transferase 286 403 - -
Hepe04g0807 612 FunFam Glutathione S-transferase GSTU6 202 286 - -
Hepe04g0807 612 CDD GST_N_Tau 401 473 - -
Hepe04g0807 612 CDD GST_C_Tau 290 401 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
Hepe04g0807 612 CDD GST_N_Tau 5 78 - -
Hepe04g0807 612 FunFam Tau class glutathione S-transferase 479 612 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g0798 Hepe-Chr4:62015348 Hepe04g0807 Hepe-Chr4:62111140 3.38e-106 dispersed
Hepe04g0799 Hepe-Chr4:62020950 Hepe04g0807 Hepe-Chr4:62111140 3.00e-189 dispersed
Hepe04g0805 Hepe-Chr4:62096263 Hepe04g0807 Hepe-Chr4:62111140 2.29e-102 dispersed
Hepe04g0807 Hepe-Chr4:62111140 Hepe09g0371 Hepe-Chr9:3298201 6.80e-63 dispersed
Hepe04g0806 Hepe-Chr4:62103373 Hepe04g0807 Hepe-Chr4:62111140 5.96e-75 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe04g0807 K00799 - rcu:8279820 349.747