Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe04g0807 ATGGAGGAACAATTGCAGGTGTTGGGTGCGTGGGTAAGTCCCTTTAGTCGTAAAGTGGAGTTGGCTCTGAAACTCAAAGCCCTAAGATACCAATATATTGAGGAAGACTTAAACAACAAGAGCGATTTGCTTCTCAAATACAACCCTATTTACAAGAAGATTCCTGTCCTCCTCCACAATGGACAACCCATTGCAGAGTCACTTATCATCCTCCAATACATTGATGAAATTTGGAAAACCAACCCCATCTTGCCCCAACATCCCCATGATAGAGCTCGAGCAAGGTTCTGGGCTAAGTATATCGATCACAAGTTCTTTCGTGCATGGGTGAAGGCTGCTCGAAGTCAAAGAGAAGAGAGACAAAATGCTATAGAGGAAGCATGTAAGGTGTTGGAACCACTCGAGAATGAGCTGAAAAGCAACAAATTCTTTGGAGGAGACAACATTGGGTTTGTGGACATTGTTGGCATCTTTTTAGGCTGCTGGGTTCCTATCATGCAAAAAGCTCTTGGGTTCGAGATTCTGAGCAGCCACAGGACTCTACTAAGTGGTAACACGATGTACAGAGTCGGACACCTGCCCATGTGCTGGAAGATTGAGAAAGAAATGGCAGAACAAGTGCAGGTGTTAGGTAACCGGTTTAGTCCTTTCAGTCGGCGAGTGGAGTTGGCTCTCAAACTCAAAGGCCTAAGCTACCAATATATTGAGGAAAGATTGCCCATAAAGAGCAAATTACTTTTCAAATACAATCCAGTTTACAAAAAGGTGCCTGTGCTCGTCCACAATGGAACACCAATTGCAGAGTCTCTTGTCATCCTCGAATACATTGATGAAAACTGGAAAACCAACCCCATCCTCCCCCATAATCCCCATGAAAGAGCTCAAGCAAGATTCTGGGCCAAGTTTATTGACGACAAGGTTTTTTCTGCGTGGTGGAAAGCCGCTCGAAGTGAAAGTGAAGGGAGAGAGAAGGCTATAGAGGAAGCGTGCAAGGTGTTGGAACCACTTGAGAAAGAGCTTAAAAGCAACAAGTTCTTTGGAGGAGAGAGCATTGGGTTCGTGGACATTGTTGGCACATTTGTGGGCCACTGGGTTCCTGTGATGGAAGAAGCTCTTGGGTTTCAGATTCTGAGCAGCCACAGGTTTCCAAAACTAACCAAATGGAGTCAAGAGCTTGTGAGCCACAGCGTTGTGAAGGCGGTGTTTGGTTTCTGGGCAAGTCCCTTTAGTCTCAGAGTAGAGTTAGCTCTCAAACTCAAAGGCGTTGATTACCAATACATTGAAGAAGATGTAATTAACAACAAGAGCGATTTGCTTCTCAAATACAACCCTATTTACAAGAAGGTTCCTGTTCTCCTCCACCATGGCAAACCCATTTCAGAGTCTCTTGTCATCCTCGAATACATCGAAGATAACTGGACAGACAACCCCATCTTCCCCGAAGATCCTTATGAAAGAGCTCTCGCCAGGTTTTGGGCTTCTTATATTGATGGCAAGGTTGCGTTAGCGGTACTGAAAGCCGCTAAAAGCAAAGGAGAGGAGATGGAGAAGGCGGTCGGAGAAGTGCAGGAGGCGTTGGAACCACTTGAGAAAGAGCTTAAAAGCAAGAAGTTCTTTGGAGGAGAGAGCATTGGGTTTGTGGACATTGTTGGCACCATGGTAGCCTACTGGGTTCCTGCCATTGAAGAAGCTTTAGGGATTGAGCTGCTAAGAAGCCACAAGTTTCCAAACCTAAGAAAATGGAGTCGAGAGCTTTCCAACCACAACATGGTGAAGGAGTTTCTGCCTAAAAAGGAAGAGCTTGTTCCCTATTTGCAAGCTATTTTTAAGAAAAACTAG 1839 45.08 MEEQLQVLGAWVSPFSRKVELALKLKALRYQYIEEDLNNKSDLLLKYNPIYKKIPVLLHNGQPIAESLIILQYIDEIWKTNPILPQHPHDRARARFWAKYIDHKFFRAWVKAARSQREERQNAIEEACKVLEPLENELKSNKFFGGDNIGFVDIVGIFLGCWVPIMQKALGFEILSSHRTLLSGNTMYRVGHLPMCWKIEKEMAEQVQVLGNRFSPFSRRVELALKLKGLSYQYIEERLPIKSKLLFKYNPVYKKVPVLVHNGTPIAESLVILEYIDENWKTNPILPHNPHERAQARFWAKFIDDKVFSAWWKAARSESEGREKAIEEACKVLEPLEKELKSNKFFGGESIGFVDIVGTFVGHWVPVMEEALGFQILSSHRFPKLTKWSQELVSHSVVKAVFGFWASPFSLRVELALKLKGVDYQYIEEDVINNKSDLLLKYNPIYKKVPVLLHHGKPISESLVILEYIEDNWTDNPIFPEDPYERALARFWASYIDGKVALAVLKAAKSKGEEMEKAVGEVQEALEPLEKELKSKKFFGGESIGFVDIVGTMVAYWVPAIEEALGIELLRSHKFPNLRKWSRELSNHNMVKEFLPKKEELVPYLQAIFKKN 612
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 62111140 62131226 - Hsped.04g08070.1 Hepe04g0807 567945

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Hepe04g0807 612 CDD GST_C_Tau 483 608 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
Hepe04g0807 612 Gene3D - 479 612 - -
Hepe04g0807 612 Gene3D - 286 399 - -
Hepe04g0807 612 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 397 477 IPR004045 -
Hepe04g0807 612 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 205 284 IPR004045 -
Hepe04g0807 612 Gene3D - 84 205 - -
Hepe04g0807 612 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 87 217 IPR010987 -
Hepe04g0807 612 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 482 605 IPR010987 -
Hepe04g0807 612 SUPERFAMILY Thioredoxin-like 6 106 IPR036249 -
Hepe04g0807 612 CDD GST_N_Tau 207 280 - -
Hepe04g0807 612 SUPERFAMILY GST C-terminal domain-like 76 176 IPR036282 -
Hepe04g0807 612 CDD GST_C_Tau 88 175 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
Hepe04g0807 612 SUPERFAMILY GST C-terminal domain-like 471 610 IPR036282 -
Hepe04g0807 612 SUPERFAMILY Thioredoxin-like 401 499 IPR036249 -
Hepe04g0807 612 SFLD Main.3: Omega- and Tau-like 203 401 IPR045073 -
Hepe04g0807 612 SFLD Main.3: Omega- and Tau-like 2 179 IPR045073 -
Hepe04g0807 612 SFLD Main.3: Omega- and Tau-like 401 611 IPR045073 -
Hepe04g0807 612 SFLD Glutathione Transferase (cytosolic) 203 401 IPR040079 -
Hepe04g0807 612 SFLD Glutathione Transferase (cytosolic) 401 611 IPR040079 -
Hepe04g0807 612 SFLD Glutathione Transferase (cytosolic) 2 179 IPR040079 -
Hepe04g0807 612 SUPERFAMILY Thioredoxin-like 207 307 IPR036249 -
Hepe04g0807 612 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Hepe04g0807 612 FunFam Tau class glutathione S-transferase 1 86 - -
Hepe04g0807 612 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 401 606 IPR045073 GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)
Hepe04g0807 612 FunFam Tau class glutathione S-transferase 394 481 - -
Hepe04g0807 612 Gene3D Glutaredoxin 1 83 - -
Hepe04g0807 612 Gene3D Glutaredoxin 206 285 - -
Hepe04g0807 612 Gene3D Glutaredoxin 400 478 - -
Hepe04g0807 612 Pfam Glutathione S-transferase, C-terminal domain 110 171 IPR004046 -
Hepe04g0807 612 Pfam Glutathione S-transferase, C-terminal domain 299 394 IPR004046 -
Hepe04g0807 612 Pfam Glutathione S-transferase, C-terminal domain 500 588 IPR004046 -
Hepe04g0807 612 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 289 409 IPR010987 -
Hepe04g0807 612 SUPERFAMILY GST C-terminal domain-like 278 402 IPR036282 -
Hepe04g0807 612 Pfam Glutathione S-transferase, N-terminal domain 4 76 IPR004045 -
Hepe04g0807 612 Pfam Glutathione S-transferase, N-terminal domain 206 278 IPR004045 -
Hepe04g0807 612 Pfam Glutathione S-transferase, N-terminal domain 401 470 IPR004045 -
Hepe04g0807 612 FunFam Tau class glutathione S-transferase 286 403 - -
Hepe04g0807 612 FunFam Glutathione S-transferase GSTU6 202 286 - -
Hepe04g0807 612 CDD GST_N_Tau 401 473 - -
Hepe04g0807 612 CDD GST_C_Tau 290 401 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
Hepe04g0807 612 CDD GST_N_Tau 5 78 - -
Hepe04g0807 612 FunFam Tau class glutathione S-transferase 479 612 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe04g0807 K00799 - - rcu:8279820 349.747
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g0798 Hepe-Chr4:62015348 Hepe04g0807 Hepe-Chr4:62111140 3.38e-106 dispersed
Hepe04g0799 Hepe-Chr4:62020950 Hepe04g0807 Hepe-Chr4:62111140 3.00e-189 dispersed
Hepe04g0805 Hepe-Chr4:62096263 Hepe04g0807 Hepe-Chr4:62111140 2.29e-102 dispersed
Hepe04g0807 Hepe-Chr4:62111140 Hepe09g0371 Hepe-Chr9:3298201 6.80e-63 dispersed
Hepe04g0806 Hepe-Chr4:62103373 Hepe04g0807 Hepe-Chr4:62111140 5.96e-75 tandem
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Hepe03g1913 . 1 209 Glutathione S-transferase Gene Family AT4G02520 58.0 8.4e-65 243.8
Hepe03g1912 . 1 209 Glutathione S-transferase Gene Family AT4G02520 58.0 3.2e-64 241.9
Hepe03g1912 . 1 210 Glutathione S-transferase Gene Family AT2G02930 59.2 8.4e-65 243.8
Hepe03g1913 . 1 210 Glutathione S-transferase Gene Family AT2G02930 57.7 1.9e-64 242.7
Hepe03g1913 . 5 206 Glutathione S-transferase Gene Family AT1G02950 55.7 3.2e-63 238.8
Hepe03g1912 . 5 206 Glutathione S-transferase Gene Family AT1G02950 54.2 1.2e-57 220.3
Hepe03g1912 . 1 210 Glutathione S-transferase Gene Family AT1G02930 58.6 1.1e-64 243.4
Hepe03g1913 . 1 210 Glutathione S-transferase Gene Family AT1G02930 54.3 2.2e-62 235.7
Hepe03g1912 . 1 210 Glutathione S-transferase Gene Family AT1G02920 59.5 7.5e-66 247.3
Hepe03g1913 . 1 210 Glutathione S-transferase Gene Family AT1G02920 55.2 1.2e-63 240.0
Hepe03g1913 . 1 213 Glutathione S-transferase Gene Family AT2G47730 57.5 1.1e-66 250.4
Hepe03g1912 . 1 213 Glutathione S-transferase Gene Family AT2G47730 58.4 9.4e-66 247.3
Hepe03g1914 . 33 191 Glutathione S-transferase Gene Family AT3G62760 64.2 3.2e-59 225.3
Hepe04g0798 . 4 214 Glutathione S-transferase Gene Family AT2G29420 50.2 1.4e-62 236.5
Hepe04g0799 . 2 206 Glutathione S-transferase Gene Family AT2G29420 51.2 2.3e-60 229.2
Hepe04g0807 . 401 609 Glutathione S-transferase Gene Family AT3G09270 56.7 4.7e-66 248.1
Hepe04g0798 . 3 215 Glutathione S-transferase Gene Family AT3G09270 53.5 9.8e-64 240.4
Hepe04g0799 . 3 208 Glutathione S-transferase Gene Family AT3G09270 54.1 3.7e-63 238.4
Hepe04g0805 . 3 213 Glutathione S-transferase Gene Family AT3G09270 53.3 1.2e-61 233.4
Hepe07g0916 . 1 217 Glutathione S-transferase Gene Family AT1G78380 68.2 3.1e-86 315.1
Hepe07g0920 . 9 221 Glutathione S-transferase Gene Family AT1G78380 68.1 2.1e-82 302.4
Hepe07g0921 . 1 203 Glutathione S-transferase Gene Family AT1G78380 65.0 9.2e-75 276.9
Hepe02g2416 . 5 222 Glutathione S-transferase Gene Family AT1G78380 54.1 1.1e-64 243.4
Hepe07g0919 . 5 216 Glutathione S-transferase Gene Family AT1G78380 52.8 2.9e-60 228.8
Hepe06g0180 . 212 315 Glutathione S-transferase Gene Family AT1G78380 73.1 5.7e-40 161.4
Hepe07g0920 . 14 221 Glutathione S-transferase Gene Family AT1G78370 63.9 1.7e-76 282.7
Hepe07g0916 . 7 215 Glutathione S-transferase Gene Family AT1G78370 60.8 1.1e-72 270.0
Hepe07g0921 . 1 203 Glutathione S-transferase Gene Family AT1G78370 64.0 4.0e-70 261.5
Hepe02g2416 . 8 221 Glutathione S-transferase Gene Family AT1G78370 52.3 1.2e-61 233.4
Hepe07g0916 . 1 217 Glutathione S-transferase Gene Family AT1G78340 63.1 8.0e-79 290.4
Hepe07g0920 . 9 221 Glutathione S-transferase Gene Family AT1G78340 60.1 4.6e-74 274.6
Hepe07g0921 . 2 204 Glutathione S-transferase Gene Family AT1G78340 60.1 2.6e-69 258.8
Hepe02g2416 . 5 220 Glutathione S-transferase Gene Family AT1G78340 52.3 3.1e-62 235.3
Hepe05g1844 . 9 161 Glutathione S-transferase Gene Family AT1G78340 50.6 5.6e-40 161.4
Hepe06g0180 . 212 315 Glutathione S-transferase Gene Family AT1G78340 68.3 1.4e-38 156.8
Hepe07g0916 . 1 215 Glutathione S-transferase Gene Family AT1G78320 50.2 1.1e-55 213.4
Hepe07g0920 . 9 225 Glutathione S-transferase Gene Family AT1G17180 65.4 7.1e-83 303.9
Hepe07g0916 . 1 220 Glutathione S-transferase Gene Family AT1G17180 61.4 1.5e-80 296.2
Hepe07g0921 . 1 208 Glutathione S-transferase Gene Family AT1G17180 63.9 1.3e-76 283.1
Hepe02g2416 . 5 225 Glutathione S-transferase Gene Family AT1G17180 52.5 1.8e-65 246.1
Hepe07g0919 . 5 223 Glutathione S-transferase Gene Family AT1G17180 50.5 4.5e-61 231.5
Hepe06g0180 . 212 318 Glutathione S-transferase Gene Family AT1G17180 67.3 1.8e-38 156.4
Hepe07g0920 . 7 224 Glutathione S-transferase Gene Family AT1G17190 59.6 5.4e-75 277.7
Hepe07g0916 . 2 218 Glutathione S-transferase Gene Family AT1G17190 56.7 5.6e-72 267.7
Hepe07g0921 . 1 206 Glutathione S-transferase Gene Family AT1G17190 56.8 1.6e-66 249.6
Hepe06g0180 . 210 315 Glutathione S-transferase Gene Family AT1G17190 67.9 3.4e-37 152.1
Hepe07g0916 . 3 215 Glutathione S-transferase Gene Family AT3G43800 57.9 6.4e-71 264.2
Hepe07g0920 . 7 221 Glutathione S-transferase Gene Family AT3G43800 53.9 9.6e-67 250.4
Hepe07g0921 . 1 204 Glutathione S-transferase Gene Family AT3G43800 54.8 1.2e-61 233.4
Hepe07g0916 . 1 220 Glutathione S-transferase Gene Family AT1G53680 55.1 1.0e-65 246.9
Hepe07g0921 . 2 208 Glutathione S-transferase Gene Family AT1G53680 56.3 6.8e-65 244.2
Hepe07g0920 . 11 225 Glutathione S-transferase Gene Family AT1G53680 54.8 3.7e-63 238.4
Hepe02g2416 . 6 225 Glutathione S-transferase Gene Family AT1G53680 54.1 6.4e-63 237.7
Hepe07g0919 . 6 223 Glutathione S-transferase Gene Family AT1G53680 50.9 8.0e-58 220.7
Hepe08g1222 . 51 221 Glutathione S-transferase Gene Family AT2G02390 66.1 4.6e-62 234.6
Hepe08g1220 . 49 215 Glutathione S-transferase Gene Family AT2G02390 67.1 5.6e-60 227.6
Hepe05g1872 . 63 201 Glutathione S-transferase Gene Family AT2G02390 52.5 1.4e-37 153.3
Hepe08g1222 . 10 220 Glutathione S-transferase Gene Family AT2G02380 64.0 2.6e-77 285.4
Hepe08g1220 . 8 214 Glutathione S-transferase Gene Family AT2G02380 62.3 8.8e-73 270.4
Hepe05g1872 . 20 201 Glutathione S-transferase Gene Family AT2G02380 52.7 5.6e-51 198.0
Hepe07g0758 . 1 237 Glutathione S-transferase Gene Family AT5G41210 68.8 5.5e-92 334.3
Hepe07g0758 . 1 237 Glutathione S-transferase Gene Family AT5G41240 67.5 1.0e-88 324.7
Hepe05g0219 . 13 232 Glutathione S-transferase Gene Family AT5G02780 67.6 1.7e-82 302.8
Hepe05g0218 . 1 203 Glutathione S-transferase Gene Family AT5G02780 68.6 3.0e-79 292.0
Hepe01g0865 . 75 294 Glutathione S-transferase Gene Family AT5G02780 64.9 1.9e-78 289.3
Hepe01g0865 . 53 299 Glutathione S-transferase Gene Family AT3G55040 63.7 4.5e-85 311.6
Hepe05g0219 . 3 230 Glutathione S-transferase Gene Family AT3G55040 56.3 3.2e-75 278.9
Hepe05g0218 . 1 201 Glutathione S-transferase Gene Family AT3G55040 63.2 4.0e-73 271.9
Hepe05g0219 . 7 232 Glutathione S-transferase Gene Family AT5G02790 68.3 2.3e-87 318.9
Hepe05g0218 . 2 203 Glutathione S-transferase Gene Family AT5G02790 72.8 1.1e-86 316.6
Hepe01g0865 . 67 294 Glutathione S-transferase Gene Family AT5G02790 63.3 2.9e-82 302.0
Hepe02g0994 . 59 266 Glutathione S-transferase Gene Family AT1G19570 58.9 3.2e-72 268.5
Hepe01g0844 . 1 98 Glutathione S-transferase Gene Family AT1G19570 75.5 8.5e-41 164.1
Hepe01g0842 . 1 101 Glutathione S-transferase Gene Family AT1G19570 73.5 4.2e-40 161.8
Hepe02g0994 . 59 266 Glutathione S-transferase Gene Family AT1G75270 61.7 9.0e-75 276.9
Hepe01g0844 . 1 98 Glutathione S-transferase Gene Family AT1G75270 80.6 1.8e-43 172.9
Hepe01g0842 . 1 101 Glutathione S-transferase Gene Family AT1G75270 75.5 8.5e-41 164.1
Hepe02g0994 . 48 268 Glutathione S-transferase Gene Family AT5G16710 76.0 8.0e-102 367.1
Hepe01g1586 . 1 267 Glutathione S-transferase Gene Family AT1G77290 69.3 1.6e-108 389.4
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000231 3 5 1 2 2 8 4 7 6 9 3 5 6 8 8 6 6 1 5 7 8 4 5 5 7 9 4 6 8 4 162