Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe04g0817 ATGGCGGAGGGTTTTGAAGTCTACCATGTCCCACAGCAAAGCAGGAGAGATAAGCTAAGACAGCGCTACGGCTCTTCAGCAGCGGCGGCGGCGGCGGCGGTGGTGTTTTCTCCTCATGATTCGGGTCTGCCTCTTGTTGGGTACTCGGCTTCCCTTTTGAAGGGCTCCAAATTCTTGAAGCCAGCTCAGCAGCTGCTCCACGACCTATTTGACTACGCCGGTCCTAATTCCGACAAGTTGCCGCCGGATTCCGCCCTTCTTGTCGACCCTCTCCTCGAGAGCTTGGGTGGGGATATTCCCACCGCCGCCGCCGTTGATCATGATCCGATCGATGATGGAACTGAAAGCCGGAGGAAAAAATCTAGGCTTATTACCATGCTGGACGAGGTTTATAGAAGATATAAGCTATACTATCAGCAGATGCAAGCAGTGGTTACAACATTCGAGTACGCTGCAGGGCTTGGCAATGCAGCTCCCTACGTCAACTTAGCCGTAAAAGCCATGTTTAAGCACTTCAGGTTCTTAAAGAACGCCATTGCTGACCAGCTCCAATTCAACAAGCACCAGCACCAGCACCAGCACCAGCCGCCTTACAACCCATATTGCCAAAGATCCATTCACAACAACAATGCCGGATTCCTCGACCATCAACCCGTCTGGCGCCCGCAGAGGGGCCTCCCCGAGAGCGCCGTTACCGTCCTCCGCGCTTGGCTCTTCGAACACTTCCTCCATCCTTATCCTACCGATACAGACAAGCTCATGTTGGCCAACCAAACCGGTCTCTCGCGAAGCCAGGTATCAAATTGGTTTATCAATGCAAGAGTGAGGCTTTGGAAGCCAATGGTGGAAGAAATCCACATGCTAGAAACAAGGCAAGCTCAGAAATCTCAGCAGAAGAGGGAATGCAATAATAATGGAAATGGCTTAAACAACAACAACAACGACCATCATCATATTTCATCCACAAACGAATCATTGAAAGCCGAGCATAATGCATCTTCTTCAAACCACCACCACCACCCACTGAACTTGTCCAATAACTCCAATTTCTTTCCGACCCACCACCCTCATGCGGCTGCCGGAGCTGCCACTATGGGCGGCGGCGGCAATAACGTTTCCTTAACTCTGGGGCTTCACCAGAACCACGGCGGGATCAGTACTCTCACGGAGCCGTTTCCGATCAATGCAGCTCAGCATTTTAACCTTGGGTTAGAAGCCAACGGTGAAGGGTTTGTAAATGAGTGGTTTTGA 1251 51.4 MAEGFEVYHVPQQSRRDKLRQRYGSSAAAAAAAVVFSPHDSGLPLVGYSASLLKGSKFLKPAQQLLHDLFDYAGPNSDKLPPDSALLVDPLLESLGGDIPTAAAVDHDPIDDGTESRRKKSRLITMLDEVYRRYKLYYQQMQAVVTTFEYAAGLGNAAPYVNLAVKAMFKHFRFLKNAIADQLQFNKHQHQHQHQPPYNPYCQRSIHNNNAGFLDHQPVWRPQRGLPESAVTVLRAWLFEHFLHPYPTDTDKLMLANQTGLSRSQVSNWFINARVRLWKPMVEEIHMLETRQAQKSQQKRECNNNGNGLNNNNNDHHHISSTNESLKAEHNASSSNHHHHPLNLSNNSNFFPTHHPHAAAGAATMGGGGNNVSLTLGLHQNHGGISTLTEPFPINAAQHFNLGLEANGEGFVNEWF 416
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 62301640 62306302 + Hsped.04g08170.1 Hepe04g0817 567955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe04g0817 416 CDD homeodomain 220 281 IPR001356 GO:0003677(InterPro)
Hepe04g0817 416 FunFam BEL1-like homeodomain protein 9 223 285 - -
Hepe04g0817 416 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 46 324 IPR050224 GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0006357(PANTHER)
Hepe04g0817 416 Pfam Homeobox KN domain 237 276 IPR008422 GO:0003677(InterPro)|GO:0006355(InterPro)
Hepe04g0817 416 MobiDBLite consensus disorder prediction 337 353 - -
Hepe04g0817 416 SMART HOX_1 220 284 IPR001356 GO:0003677(InterPro)
Hepe04g0817 416 Gene3D - 223 285 - -
Hepe04g0817 416 SUPERFAMILY Homeodomain-like 222 287 IPR009057 -
Hepe04g0817 416 MobiDBLite consensus disorder prediction 291 364 - -
Hepe04g0817 416 SMART prehox3 46 181 IPR006563 -
Hepe04g0817 416 ProSiteProfiles 'Homeobox' domain profile. 217 280 IPR001356 GO:0003677(InterPro)
Hepe04g0817 416 MobiDBLite consensus disorder prediction 297 330 - -
Hepe04g0817 416 Pfam Associated with HOX 53 180 IPR006563 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g0817 Hepe-Chr4:62301640 Hepe10g1010 Hepe-Chr10:39999464 2.20e-68 dispersed
Hepe04g0817 Hepe-Chr4:62301640 Hepe05g0137 Hepe-Chr5:1651518 8.18e-99 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55382 PF07526 POX 2.90E-32 No_clan Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe04g0817 - - - 0.0