Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe04g0830 ATGGAAACCAATTTCCCCCTTCTCATTTTACTCTCACTCTTCCTCTGCTGCCCGGCCAAGCGCTGCCCGGACTGCGGCCGCTCGCCGGTGCCGTACCCACTCAGCACGCACCCGGACTGCGGCGACCCTCTTTACAGTGTCCGGTGCACCGCCGGGCAGCTCTGGTTCGAGTCCGTCAATGGGTCTTCCTATTTGATCACTTCCGTTAATCCGGTGGCTCGGACGCTGATCGTCCGGCCGCCGGGGTTGGCCAAAAACGCCTGCGTTTCGTCGGATTTTGGGAGCCATGGTTTTTGGCTCGACACTGCCCTTCCTTTCATCATTACCAATAGAAACATGGTTCTGCTCTTCAACTGTTCGATGGAAATCCTCGAAAATAATTGGAACTGTTCGCCTAATGGCGTCTGTCAGGACTTCGTTCGGCAGAATCCGGTGGCGATGGCGGCGTGTAAGGCAGCGCCGACGTGCTGCTGGTACACGAGTGGCGGTTCCATCAGTGAGTATAGGATCAGGGTGCGGAAGGAGCGGTGTTCGGCTTATGAATCTTTTGTGAATTTGGGTGGTTCTGTTCCGGCGAAGAAGTGGCCGGAACCTGGGGTGGAGATTCAATGGGCACCGCCGCGAGAGCCGCCGTGTCGACTGGCCACGGACTGCCGGAATTGGGAGAATTCTGCTTGTTTGCCGGACTCTGCAAAGGCCGGCCAGAGAAGGTGCTTCTGCAAGGTGCCTTTCAAGTGGGATCCCGTAAATGGGTTGTGTAATGGCAACAATGTGAAAATACAGAACAAGAGAACTCACAAGAAGCATAAGAAGATGCCTGCTATTCTTGGAGCAATGGCAGGAGTATTTGTATTCGTGATTGGAGGTTTGTCAATCATGTTTATAATTTTCAGAAGACATCGTGCGATTCCGAAAGGGCAAGAGCTGAGTTCGAAACAAGTTCGAGAAGTGGTTCTAACTGCTAACAGCAGTGGAAAATCGGCGAGGATGTTCACAACCAAAGAGATAGCAAAGGCCACAAACAACTTCTCCAAAGAGAACTTACTTGGCTCTGGTGGCTTTGGAGAGGTCTTCAAAGGCAACCTAGAAGATGGAACCTTAATAGCTGTTAAGCGTGCCAAGTTGGGATGCATGAAGGGTATTGATCAAATCCTGAACGAGGTTCGAATTCTTTGTCAGGTGAACCATCGGTACCTTGTTCGGGTACTTGGATGTTGTCTCGAACTCGAGCAACCCCTGTTAATATATGAGTACATCTCAAATGGGAACCTATTTGATCATCTTCATGGGAATATAAGTTCAAGCAAATGGCCACCGCTGACATTGAATCGTCGACTCTACATTGCTCACCAAACAGCCGAGGGCCTTGCTTATCTCCACACTTCAGCCACGCCGAGAATCTATCACCGAGACATAAAGTCTAGCAATATTCTACTCGACGAGAAGTTAAATGCCAAAGTTGCTGATTTCGGGCTTTCTAGATTGGCTATCACAGAATCTAGCCACATTACAACTGGCGCTCAGGGAACATTAGGCTATCTAGATCCAGAATATTACCTTAACTTTCAATTGACAGACAAGAGTGATGTTTATAGTTTTGGAGTTGTCATGTTGGAGCTGTTGACTTCTGAGAAAGCCATTGATTTTAATAGAGAAGAAGAAGATATAAATCTAGTAGTTTATATCAAGAAGATTATCAAAGAAGACAGATTGATGCAGGTTGCTGATCCTGTGATTACAGAGAGAGCAAGCAGAGTTCAAATGGAGATAATCAAGGCATTAGGGTCTCTAGCAGCAGCTTGCTTGGATGAAAAGAGGCAGAACAGACCTGCCATGAAAGAAGTTGCTGATGAGCTAGCTAACATTATTTCCATTCTTAATAGTCAGGAACCCCATTATACAGATGATAGGACAGGGCTAAGGGCTAAGGCAGTAATCTCGACGGAGATTAAGATGAGCTTCCATGATCAAACCTCAGCATAG 1983 47.86 METNFPLLILLSLFLCCPAKRCPDCGRSPVPYPLSTHPDCGDPLYSVRCTAGQLWFESVNGSSYLITSVNPVARTLIVRPPGLAKNACVSSDFGSHGFWLDTALPFIITNRNMVLLFNCSMEILENNWNCSPNGVCQDFVRQNPVAMAACKAAPTCCWYTSGGSISEYRIRVRKERCSAYESFVNLGGSVPAKKWPEPGVEIQWAPPREPPCRLATDCRNWENSACLPDSAKAGQRRCFCKVPFKWDPVNGLCNGNNVKIQNKRTHKKHKKMPAILGAMAGVFVFVIGGLSIMFIIFRRHRAIPKGQELSSKQVREVVLTANSSGKSARMFTTKEIAKATNNFSKENLLGSGGFGEVFKGNLEDGTLIAVKRAKLGCMKGIDQILNEVRILCQVNHRYLVRVLGCCLELEQPLLIYEYISNGNLFDHLHGNISSSKWPPLTLNRRLYIAHQTAEGLAYLHTSATPRIYHRDIKSSNILLDEKLNAKVADFGLSRLAITESSHITTGAQGTLGYLDPEYYLNFQLTDKSDVYSFGVVMLELLTSEKAIDFNREEEDINLVVYIKKIIKEDRLMQVADPVITERASRVQMEIIKALGSLAAACLDEKRQNRPAMKEVADELANIISILNSQEPHYTDDRTGLRAKAVISTEIKMSFHDQTSA 660
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 62478820 62481587 - Hsped.04g08300.1 Hepe04g0830 567968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe04g0830 660 ProSiteProfiles Protein kinase domain profile. 343 622 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe04g0830 660 FunFam Wall-associated receptor kinase-like 20 419 632 - -
Hepe04g0830 660 ProSitePatterns Protein kinases ATP-binding region signature. 349 371 IPR017441 GO:0005524(InterPro)
Hepe04g0830 660 CDD STKc_IRAK 349 622 - -
Hepe04g0830 660 Gene3D Phosphorylase Kinase; domain 1 304 418 - -
Hepe04g0830 660 SMART serkin_6 343 626 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe04g0830 660 Pfam Protein tyrosine and serine/threonine kinase 346 619 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe04g0830 660 SUPERFAMILY Protein kinase-like (PK-like) 326 619 IPR011009 -
Hepe04g0830 660 Gene3D Transferase(Phosphotransferase) domain 1 419 643 - -
Hepe04g0830 660 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 315 418 - -
Hepe04g0830 660 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe04g0830 660 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 18 623 IPR044652 GO:0004672(InterPro)|GO:0016301(PANTHER)|GO:0016310(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g0830 Hepe-Chr4:62478820 Hepe05g0319 Hepe-Chr5:3943871 5.13e-180 dispersed
Hepe02g3355 Hepe-Chr2:83126701 Hepe04g0830 Hepe-Chr4:62478820 1.23e-210 wgd
Hepe04g0830 Hepe-Chr4:62478820 Hepe08g0752 Hepe-Chr8:6765130 1.69e-64 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72725 PF07714 PK_Tyr_Ser-Thr 1.80E-45 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe04g0830 - - - 0.0