Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe04g0835 ATGGCGGCGATCTTCATCATCACGTTAATTCTTTCAATATCCGTTCCTTTAGCTTCCGGAGCTTCTGAAAAACTCACCTTCACCTTCAATGGCTTCGACTCCGGCGATCTCAGCCTCGACGGCGTCGCCGAAGTAACCTCCAACGGCCTTTTGAAGCTCACCAACGACGTCGACCAACAAATCGGCCACGCGTTTTACCCGAATTCCATTTCCCTCAAAAACCCATCAAACAACAATTCCTCAATTTCCTCCTTCTCTGCAACTTTCGTCTTCGCCATACAGTCCGAATATCACGACCTTGGCGGCCATGGAATTGCCTTCGTCATCTCGCCGTCGAGGGGTATCCCCGGAGCTCTGCCGAGCGAGAGCCTCGGTCTGTTCAACACGTCCAACAATGGGGACGAAACAAGTCACATCTTCGCCGTTGAACTCGACACGATTCGGAATCTCGACCTCGACGACATCAACGACAACCACGTCGGAATCAACATTAACGGACTGAAATCAGAGCTGGCGACTCCGGCGGGGTACTGGGTCGACGGCGAATTTCGGAATTTGAAACTAATCAGTGGCAAATCAATGCAAGTTTGGATCGAATACGACGGTTTGGAGAAACGAATTGATGTTACCATGGCTTCAATTGAGATAATCGTGAAACCCAAAATCCCCCTTTTGTCTTTGCGGCGGGATTTGTCGTCGGTTATCAACGACATCATGTACGTCGGATTCTCCTCGTCGACAGGCTCCATTACGACGTTGCATTACATTCTGGGTTGGAGCTTCAGCATCAATGGCAAAGCGCAGAGTCTCGCTCTGTCTCAACTCCCCGAGCTTCCACCTCAAACCACAACAAAAAAACAGAGATCTAAATTCTTAACGGTGGGGTTACCGTTGATTTCTATTTCCATCGCTGTAATTACAATTTCCGGCGTAATTTACTTCATTCACCGGAGACAGAAGTTCGCGGAGATTCTCGAGGATTGGGAGCTAGAATACGGACCGCAAAGATTCAAATACAAGGATCTATATATCGCCACAAAGGGATTTACAGAGAGGGAATTTCTGGGATTTGGGGGATTCGGGAGAGTTTACAAAGGGGTATTACCAAATTCGGGAATTGAAGTGGCAGTGAAGAGAATCGCACAGGAATCGAGACAGGGGATGAAGGAATTCGTGGCGGAGATAGTGAGTGTAGGGAGGCTCCGGCACCGGAACGTGGTGGCGCTGTTGGGGTACTGCCGGAGGAAGGAGGAGTTGTTCTTGGTGTATGAATATATGGCGAATGGAAGTTTGGATAGATATCTATATGAGTTGCCGGAAATGGAAGTGAGTATAAATTGGGAGCAGAGATTTGAGATTATAAAGGGAGTTTCGTCGGGGTTGTTTTATTTACATGAACAATGCGAACAAGTTGTGATTCATAGAGATGTGAAGGCGAGTAATGTGTTGCTTGATGATGATTTCAATGGAAGATTGGGTGATTTTGGTTTGGCCAAAATGTATGATCGTGGTGCTAATCCTCGAACCACCCACGTCGTTGGTACTCTTGGGTATCTAGCGCCGGAGCACATAAGAACAGGGAGAGCCACAACGAGAACAGACGTATACGCCTTCGGAGCGTTTCTTCTTGAAGTTGCCTGCGGAAGAAGGCCAATTCAGCAGCAAGACGACGCCGACGACTTCATATTAATGGATTGGGTCTTCTCCTGTTGGACAAACGGCAACATTCTCATTACCGCCGACCCTAAATTGGGCGGCAATTTCGAACCTTTACAGCTCGAATTGGTCCTCAAACTTGGTTTGCTCTGTTCCCACTCCTCGCCGGCGGTTCGCCCCACCATGCGCCAGGTTCTGCAGTATTTGGAGGCCGATGCGCCGCTACCAAACCTCGCCTCGCTCCGGTGGCGCCTCTCCGCCAGTGGGTTCTTGAATTTGATGCGTCGCGAGGGTGATACTGAGATGTCTTATCCGTTGTCGACGCAGAGGAATGTCACAAGCTCGTCGTCGGTTGCAGAGTCTATTATCACGGAAGGCCGCTGA 2040 49.31 MAAIFIITLILSISVPLASGASEKLTFTFNGFDSGDLSLDGVAEVTSNGLLKLTNDVDQQIGHAFYPNSISLKNPSNNNSSISSFSATFVFAIQSEYHDLGGHGIAFVISPSRGIPGALPSESLGLFNTSNNGDETSHIFAVELDTIRNLDLDDINDNHVGININGLKSELATPAGYWVDGEFRNLKLISGKSMQVWIEYDGLEKRIDVTMASIEIIVKPKIPLLSLRRDLSSVINDIMYVGFSSSTGSITTLHYILGWSFSINGKAQSLALSQLPELPPQTTTKKQRSKFLTVGLPLISISIAVITISGVIYFIHRRQKFAEILEDWELEYGPQRFKYKDLYIATKGFTEREFLGFGGFGRVYKGVLPNSGIEVAVKRIAQESRQGMKEFVAEIVSVGRLRHRNVVALLGYCRRKEELFLVYEYMANGSLDRYLYELPEMEVSINWEQRFEIIKGVSSGLFYLHEQCEQVVIHRDVKASNVLLDDDFNGRLGDFGLAKMYDRGANPRTTHVVGTLGYLAPEHIRTGRATTRTDVYAFGAFLLEVACGRRPIQQQDDADDFILMDWVFSCWTNGNILITADPKLGGNFEPLQLELVLKLGLLCSHSSPAVRPTMRQVLQYLEADAPLPNLASLRWRLSASGFLNLMRREGDTEMSYPLSTQRNVTSSSSVAESIITEGR 679
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 62614967 62617103 - Hsped.04g08350.1 Hepe04g0835 567973
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe04g0835 679 ProSiteProfiles Protein kinase domain profile. 349 630 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe04g0835 679 SUPERFAMILY Protein kinase-like (PK-like) 330 628 IPR011009 -
Hepe04g0835 679 FunFam L-type lectin-domain containing receptor kinase V.9 24 268 - -
Hepe04g0835 679 Gene3D - 22 275 - -
Hepe04g0835 679 Gene3D Transferase(Phosphotransferase) domain 1 426 627 - -
Hepe04g0835 679 Pfam Protein kinase domain 350 619 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe04g0835 679 FunFam L-type lectin-domain containing receptor kinase S.4 426 634 - -
Hepe04g0835 679 Gene3D Phosphorylase Kinase; domain 1 334 425 - -
Hepe04g0835 679 ProSitePatterns Serine/Threonine protein kinases active-site signature. 472 484 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe04g0835 679 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 281 IPR013320 -
Hepe04g0835 679 ProSitePatterns Protein kinases ATP-binding region signature. 355 378 IPR017441 GO:0005524(InterPro)
Hepe04g0835 679 CDD lectin_legume_LecRK_Arcelin_ConA 25 265 IPR001220 GO:0030246(InterPro)
Hepe04g0835 679 FunFam Lectin-domain containing receptor kinase A4.3 334 425 - -
Hepe04g0835 679 SMART serkin_6 349 621 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe04g0835 679 PANTHER - 27 637 IPR050528 GO:0002229(PANTHER)|GO:0004675(PANTHER)|GO:0005886(PANTHER)|GO:0042742(PANTHER)
Hepe04g0835 679 Pfam Legume lectin domain 25 276 IPR001220 GO:0030246(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g0835 Hepe-Chr4:62614967 Hepe05g0154 Hepe-Chr5:1964944 1.10e-280 dispersed
Hepe04g0834 Hepe-Chr4:62599988 Hepe04g0835 Hepe-Chr4:62614967 3.82e-186 tandem
Hepe03g0355 Hepe-Chr3:5079631 Hepe04g0835 Hepe-Chr4:62614967 3.37e-72 transposed
Hepe01g1463 Hepe-Chr1:79934998 Hepe04g0835 Hepe-Chr4:62614967 3.12e-65 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72727 PF00069 Pkinase 5.30E-49 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe04g0835 - - - 0.0