Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe04g0852 ATGGGTAATCGAATTGGGAAAATTGGCCACTGCTTCGCCGGCGACGGCGATATCTCCCGCCGTTATGATCCCGCCGACGTTATCGCCGACTCTCACGACTGTGGTTTTGGCCACTCTTTCTACTACCTCCCACCCGACCCACATACCCTCTCCTCCTCTAAAAATTTCTCCGACGACTACATCTCTCCGACGGCGACCATTTTTCGTTCGATTTCCGGCGCCTCTGTGAGCGCCAACGTATCAACGCCACTCTCTACTTCTCTCGTTGATCTCTATCCTTACAGTACCACGTTTGATCGCGCCGCCGCTTTTGATTGCTCGAATTCCTTCGCCTCCGTGCCGCTTCAACCGGTGCCCCGCCACTCTGTGTCGGGAAATTCCGGCGGTTTCCCTTCTTCCGGTCCGATCGAGAGAGGGTTTTTATCTGGACCCTTGGCTATTCGGAGCTCCGAATCCGGTCCGATTGATCGTGGGGTTTATTCTGGACCGATTGAAAAGAGCGGCGGACCCGAGAAATTGCAGAGGAGCTTATCTCACGGCGGCGGGAATGGAGATAAACAACCCAAATTGAAAAGAAGAAGAAGAAGAAATCTCATTCGGATTCTTAAGAGAGCCATATCCAAAACGATTTCTCGAAACCAGAAGGCTGTGAATTCGAGAGTGAGAGAATCGGAATCGTACAACAAACACAACGAAAATGCTGTAGCAGCTCAGACTCAGAGCAGTGTTCATTTGAGCTTGCCGCCGGAAGACGACGGCGATTACTTTCTCGGCGGCCAGAGCGTACAGTGGGCACAGGGGAAGGCCGGCGAGGACAGAGTACACGTGGTGATTTCCGAGGATAATGGTTGGGTTTTTGTGGGAATTTATGATGGATTCAACGGCCCTGATGCTCCTGATTACTTACTCGCTAATCTCTACTCCGCCGTTCTCAAAGAGCTCAAAGGTTTGATTTGGAACGACAAGTTCGATTCAACCGCAACTTCGTCCTCCATGAATTCATCAAACTCTGCTTCAATTGAGGAAGACGATGGAACAATAACCCACATGAAAAACCAGGGGAATGTTCATCAATCTACAGAGAGAGTTTACAATACAAATTACAGGACGAGTCAGCTGATGAAGAAGGCTGATCAGAATCCCAAGAATTGGAAATGTGAATGGGAAAGGGAAAGATTTGAAAATACACAATTAGATCACCACCATCCAATCTGGGATGAATCGACAGCAATCAATCATTCCGAGGTGCTGAATGCTCTGTCTCAAGCATTGAGAAAAACAGAGGAAGCATATTTACAGAATGCAGATAAGATGGTGACAAGAAATCCTGAGCTAGCTCTAATGGGTTCATGTGTTTTGGTTATGTTGATGAGAGGAGAAGACGTCTACTTGATGAATGTAGGAGACAGCCGTGCCATTGTAGCGCAGCAACTCGAACCGGAGTTCGGGATTGGGAAGCCGTACAGAGATTTGGAGAGAATCAATGAAGGAACACTACGAGTATTTGAATCCTCTAATGGAGTCGAGTTTGAAAGATTAACAACCTTGGCTTCCCATCAACTTACAATGGACCACAGCACATACACAGAGGAGGAAGTTCAGAGGATCAAGAATGATCATCCCGATGACGCTTCCGCGATTATGAATGACAGAGTCAAAGGTTACTTGAAAATCACACGGGCGTTCGGAGCTGGCTTTCTCAAACAGCCAAAGTGGAATGATGCATTGCTAGAGATGTTCAGAATAGACTATGTGGGAAATGCACCTTACATCACCTGTGATCCAACACTGAGCCATTATAAACTCAGCCCAACAGACAGATTCTTGATATTGTCCTCTGATGGACTCTACCAGTACTTCACTAATGAACAAGCTGTTGCTCAAGTAGAGTCCTTCATTGCTTCTTTTCCTGAAGGAGATCCTGCTCAACATCTCATTGAAGAAGTATTGTTCCGAGCAGCTAAAAAATACGGAATGGACTTCCATGAGCTGCTTGATATCCCACAAGGGGAGCGGCGGAAGTACCATGACGACGTTTCGGTAATCGTCATTTCATTCGAAGGAAGAATTTGGCATTCGTTGATGTAA 2088 47.03 MGNRIGKIGHCFAGDGDISRRYDPADVIADSHDCGFGHSFYYLPPDPHTLSSSKNFSDDYISPTATIFRSISGASVSANVSTPLSTSLVDLYPYSTTFDRAAAFDCSNSFASVPLQPVPRHSVSGNSGGFPSSGPIERGFLSGPLAIRSSESGPIDRGVYSGPIEKSGGPEKLQRSLSHGGGNGDKQPKLKRRRRRNLIRILKRAISKTISRNQKAVNSRVRESESYNKHNENAVAAQTQSSVHLSLPPEDDGDYFLGGQSVQWAQGKAGEDRVHVVISEDNGWVFVGIYDGFNGPDAPDYLLANLYSAVLKELKGLIWNDKFDSTATSSSMNSSNSASIEEDDGTITHMKNQGNVHQSTERVYNTNYRTSQLMKKADQNPKNWKCEWERERFENTQLDHHHPIWDESTAINHSEVLNALSQALRKTEEAYLQNADKMVTRNPELALMGSCVLVMLMRGEDVYLMNVGDSRAIVAQQLEPEFGIGKPYRDLERINEGTLRVFESSNGVEFERLTTLASHQLTMDHSTYTEEEVQRIKNDHPDDASAIMNDRVKGYLKITRAFGAGFLKQPKWNDALLEMFRIDYVGNAPYITCDPTLSHYKLSPTDRFLILSSDGLYQYFTNEQAVAQVESFIASFPEGDPAQHLIEEVLFRAAKKYGMDFHELLDIPQGERRKYHDDVSVIVISFEGRIWHSLM 695
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 62793736 62796458 + Hsped.04g08520.1 Hepe04g0852 567990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe04g0852 695 SMART PP2C_4 245 684 IPR001932 -
Hepe04g0852 695 SUPERFAMILY PP2C-like 265 687 IPR036457 -
Hepe04g0852 695 MobiDBLite consensus disorder prediction 211 245 - -
Hepe04g0852 695 MobiDBLite consensus disorder prediction 230 245 - -
Hepe04g0852 695 ProSiteProfiles PPM-type phosphatase domain profile. 256 686 IPR001932 -
Hepe04g0852 695 FunFam Protein phosphatase 2C 29 254 693 - -
Hepe04g0852 695 Pfam Protein phosphatase 2C 405 654 IPR001932 -
Hepe04g0852 695 CDD PP2Cc 405 686 IPR001932 -
Hepe04g0852 695 Gene3D - 195 691 IPR036457 -
Hepe04g0852 695 MobiDBLite consensus disorder prediction 147 194 - -
Hepe04g0852 695 PANTHER PROTEIN PHOSPHATASE 2C 236 686 IPR015655 GO:0004722(InterPro)|GO:0006470(PANTHER)|GO:0006470(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g0852 Hepe-Chr4:62793736 Hepe06g1044 Hepe-Chr6:58593479 2.95e-139 dispersed
Hepe05g1451 Hepe-Chr5:63830089 Hepe04g0852 Hepe-Chr4:62793736 1.24e-69 transposed
Hepe04g0852 Hepe-Chr4:62793736 Hepe08g0790 Hepe-Chr8:7084474 4.54e-237 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe04g0852 - - - 0.0