Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe04g0853 ATGGCGATCTCTGGATTCCGAGCTCTTCAATGGTGGAGCAAATGGTCCAAGAAAGACTGGGCGATTGCAGTCATCTCTTTCGCCTTCGTTGTTTTCGTTTTCTCTTTCTTCTCCGACTCTTGGCATGCTGAAGACGACGGTGTCATCAACCACACTCTCGATCTCAATCCCGCCGACGACCCCGATTTCGTTGACCTATCTTTACTGCAGAATGCCAAAGCAAAAGGCGCTCTATGTCTAGATGGGAGCTTGCCTGGATATCATTTTCAGAAAGGGTTCGGATCTGGTTCTACTAATTGGGTGCTTCACATTGAGGGTGGAGGTTGGTGCGATTCAGTCTCGTCCTGTTCTTGGCGTAAAATGACCCCGTTAGGTTCATCAGACTACATGGAGCGTCGTGTTCGTTTTTCTGGAATTTTAAGTAGTGATGCTTCCAAAAATCCTGATTTCTATAATTGGAACAAAATCAAGATACGTTACTGTGATGGAGCATCGTTTGCAAGCCACCCTGAGGGTGAAACAAAGAATGGAAATAGACTTTATTTCAGAGGCCAGATCATCTGGGAAGCGCTTATGGATGAACTCTTATCTGTTGGCTTGTCAAAGGCAAGGCAGGCTCTTCTTTCAGGGTGCTCTGCTGGGGGCTTGGCTACCCTCATACATTGTGATGGCTTCAGAGAGCTTTTGCCGAAGGATGCAACTGTCAAGTGTCTAGCTGATGCTGGATTTTTCCTTGACGAGAAAGATGTTTCGGGAAATCATACAATGAGATCTTTCTATCATGATGTTTTTAACCTTCAGAACACTGCTAAAAGCTTACCCAAGGATTGTACTGCAACAGAAGAGCCATCTAAGTGTCTCTTTCCTCAAGAAATTATCAAACATATAAGCACCCCGTTGTTTCTTGTCAACCCAGCTTATGATTTTTGGCAGATACAAAATGTCTTGGTACCAAATGCATTAGATCCTGCTGGCTCTTGGAAGGATTGTAGGCTTAATATTCATAAATGTGATCATGCTCAGCTTGAAATTCTTCAAGGGTTCCGGGACTCTTTGCTAAAGGCACTGAAGGACTTCAAGCACACCAAGGACGGAGGACTTTTTATAAATTCTTGCTTCATCCATTGCCAAACATGGATGTCTGAGACATGGCATTCCCCCAATTCTCCAAGGATAAATAAGAGGACTATAGCAGAGGCCGTGGGTGATTGGTACTTCAAACGAAATTCAGTGAAGCTAATTGACTGCCCTTTTCCATGCAATCCTACCTGCATTCATATGGATTTTAGCTTAGGTTAA 1299 43.96 MAISGFRALQWWSKWSKKDWAIAVISFAFVVFVFSFFSDSWHAEDDGVINHTLDLNPADDPDFVDLSLLQNAKAKGALCLDGSLPGYHFQKGFGSGSTNWVLHIEGGGWCDSVSSCSWRKMTPLGSSDYMERRVRFSGILSSDASKNPDFYNWNKIKIRYCDGASFASHPEGETKNGNRLYFRGQIIWEALMDELLSVGLSKARQALLSGCSAGGLATLIHCDGFRELLPKDATVKCLADAGFFLDEKDVSGNHTMRSFYHDVFNLQNTAKSLPKDCTATEEPSKCLFPQEIIKHISTPLFLVNPAYDFWQIQNVLVPNALDPAGSWKDCRLNIHKCDHAQLEILQGFRDSLLKALKDFKHTKDGGLFINSCFIHCQTWMSETWHSPNSPRINKRTIAEAVGDWYFKRNSVKLIDCPFPCNPTCIHMDFSLG 432
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 62800130 62809946 - Hsped.04g08530.1 Hepe04g0853 567991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe04g0853 432 PANTHER NOTUM-RELATED 41 426 IPR004963 GO:0009505(PANTHER)|GO:0016787(InterPro)|GO:0052793(PANTHER)|GO:0071555(PANTHER)
Hepe04g0853 432 Pfam Pectinacetylesterase 61 410 IPR004963 GO:0016787(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g0853 Hepe-Chr4:62800130 Hepe09g1772 Hepe-Chr9:55498252 4.04e-153 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe04g0853 K19882 - csv:101206380 808.52