Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe04g0870 ATGAGCTTGAACATAACCTCCATCAAAACCGCCTCCAATGGCGTTTGGCAAGGCGACAACCCTCTTGATTTCGCCTTCCCTCTCCTAATTCTTCAGTCACTTCTCATCTTAATCCTCACCCGCTTCCTCGCCTTCCTTTTCAAACCCCTCCGTCAGCCCAAAGTCATCGCCGAGATCGTCGGCGGGATTCTTCTCGGTCCTTCCGCTTTTGGACGAAACAAAGCTTATTTGCACCGAATTTTTCCTCCATGGAGCACTCCCATTCTCGAGTCTGTTGCCAGCATTGGTTTGTTGTTCTTTTTGTTCCTGGTTGGACTGGAACTCGATTTGTCCTCCATCCGCCGCAGCGGACGGAGGGCTTTCGGAATCGCCTTTGCTGGAATCTCCGTGCCTTTCATCTCTGGCATGGGCGTTGCTTTCATTCTCCGCAAGACCATCGACGGCGCCGATAAAGTCGGTTACGGTCAGTTCGTTGTATTTATGGGCGTCGCTCTCTCCATCACTGCCTTCCCAGTTCTCGCTCGCATTTTAGCTGAACTCAAACTACTCACCACTGAAGTCGGCGAAACAGCTATGGCTGCGGCCGCCTTCAACGACGTCGCTGCCTGGATCCTCCTGGCTCTCGCCGTCGCCCTTGCCGGTAACGGCGAGGAAGGCGGGCCTCACAAGAGTCCGTTGATTTCGGTGTGGGTCCTACTTTCGGGAGTCGGGTTCGTGATTTTCATGATGGTAGTGATCCGACCGGGAATGAAGTGGATCGCACGGCGGTGCTCGTACGAGCACGACGCCGTCGACGAGGTGTACATCTGTTTGACGCTGATGGGGGTGTTGGCGTCGGGATTCGTGACGGATTTGATCGGAATTCATTCGATATTTGGGGGTTTTATATTCGGATTGACGGTGCCGAAAGGGGGGAGGTTTGCGGAGAGATTGATAGAGAGGATTGAGGATTTCGTATCGGGTCTTCTTCTTCCTCTGTATTTTGCTTCCAGTGGGTTGAAGACGGACGTGGCCAAGATCAAAGGGGGGAAATCGTGGGGGTTGCTGGCGCTGGTGATTTCCACGGCGTGTGCAGGTAAGATTCTGGCGACGTTCGTGGCGGCGATGGCGTTTCTGATGCCGGCGAGGGAGGCGCTGGCGTTGGGGCTCCTTATGAACACCAAAGGCTTGGTTGAACTCATCGTGCTCAATATTGGCAAGGAGAAAAAGGTTCTAAACGACGAAGTATTCGCCATATTAGTATTAATGGCGCTATTCACAACCTTCATCACCACCCCCACCGTCATGGCGGTTTACAAACCAGCCCGCCGCCGCAGCGGCTCCACACGAACCCGCCGCAAACTCCGAGACCTCCCTGCCGACGAGCTCCGGATCCTGGCCTGCCTCCACAGCTCAGGCAACGTCCCCTCCCTAATCAGCCTGACCGAGTCAACTCGCAGCACAAAAAACTCCTCCCTCAAACTCTTCGTAATGCACCTGGTCGAGCTCACCGAGCGGTCCTCTTCTATAATGATGGTCCAACGGGCCCGCAGAAACGGCTTTCCTTTCTTCGCCCGGTTCAGAAAGGCCGGCGAGTGGCGCGACCAGATGGCCGGGGCCTTCCAGGCCTACAGCCAATTGGGCCGGGTCAAGGTCCGGCCCACTACGGCGGTTTCTTCATTGGCCACCATGCATGATGATATCTGCCACGTGGCGGATGATAAGAGGGTGACGATGATCGTGTTGCCGTTTCATCGGAATTGGAGGGTGGTCGGCGACGAGGAGGAGGAGAATGTGGGCCATGGGTGGAGAGTTGTGAACCAGCGGGTTCTTAAGACCGCGCCTTGCTCTGTGGCGGTTCTTGTGGACCGTGGGTTTGGGGCTAATGGGCCTGGGCCTACGCTTTGTGTGGCCCAGAGGATATGTGTCGTGTTTTTTGGTGGGCCCGATGACCGGGAGGCGCTGGAGTTGGGTGGCCGGATGGCGGACCATCCGGCGGTGAAGGTCACGGTGGTCAGGTTTCGGCCTTCGACGGCGGATGGGGTGGAGGGTAGTAATGTCATTTTGCGACCCGTGCATTCCAAATCTAGCGACAACCATTATACCTTCTCTTCAGCTCCAATCAACAAGGAAAAAGAGAAGGAGCTAGACGATGCAGCAATGGAAGAATTCAGAAGCAAATGGGATGCAATAGTTGAGTACACAGAGAAGCAGGCCAGCAACATGAACATGATGGTTGAAGGGGTGGTGGGCATCGGAAAGGAAGGTGGTTACGACCTAATCGTGGTCGGGAAGGGTCGGGTTCCATCAAGCATGGTGGCGAAACTAGCGGATCGAGCAGCGGAGCACGCCGAGTTGGGGCCGGTAGGGGACATATTGGCGAGCTCCGGCAGGGGAATAGTATCTTCAATACTAATAATTCAACAGCATGAAGGAGGTACTCCTGCAGAAGAAACTCCAGTTTTGAAGATAGCATAA 2457 55.03 MSLNITSIKTASNGVWQGDNPLDFAFPLLILQSLLILILTRFLAFLFKPLRQPKVIAEIVGGILLGPSAFGRNKAYLHRIFPPWSTPILESVASIGLLFFLFLVGLELDLSSIRRSGRRAFGIAFAGISVPFISGMGVAFILRKTIDGADKVGYGQFVVFMGVALSITAFPVLARILAELKLLTTEVGETAMAAAAFNDVAAWILLALAVALAGNGEEGGPHKSPLISVWVLLSGVGFVIFMMVVIRPGMKWIARRCSYEHDAVDEVYICLTLMGVLASGFVTDLIGIHSIFGGFIFGLTVPKGGRFAERLIERIEDFVSGLLLPLYFASSGLKTDVAKIKGGKSWGLLALVISTACAGKILATFVAAMAFLMPAREALALGLLMNTKGLVELIVLNIGKEKKVLNDEVFAILVLMALFTTFITTPTVMAVYKPARRRSGSTRTRRKLRDLPADELRILACLHSSGNVPSLISLTESTRSTKNSSLKLFVMHLVELTERSSSIMMVQRARRNGFPFFARFRKAGEWRDQMAGAFQAYSQLGRVKVRPTTAVSSLATMHDDICHVADDKRVTMIVLPFHRNWRVVGDEEEENVGHGWRVVNQRVLKTAPCSVAVLVDRGFGANGPGPTLCVAQRICVVFFGGPDDREALELGGRMADHPAVKVTVVRFRPSTADGVEGSNVILRPVHSKSSDNHYTFSSAPINKEKEKELDDAAMEEFRSKWDAIVEYTEKQASNMNMMVEGVVGIGKEGGYDLIVVGKGRVPSSMVAKLADRAAEHAELGPVGDILASSGRGIVSSILIIQQHEGGTPAEETPVLKIA 818
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 62991912 62999117 + Hsped.04g08700.1 Hepe04g0870 568008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe04g0870 818 FunFam Cation/H(+) antiporter 15 28 439 - -
Hepe04g0870 818 Pfam Sodium/hydrogen exchanger family 39 428 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
Hepe04g0870 818 Gene3D - 466 782 - -
Hepe04g0870 818 PANTHER CATION/H + ANTIPORTER 9 809 IPR050794 GO:0006885(PANTHER)|GO:0012505(PANTHER)|GO:0015672(PANTHER)
Hepe04g0870 818 Gene3D - 28 441 IPR038770 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g1567 Hepe-Chr2:20798154 Hepe04g0870 Hepe-Chr4:62991912 9.15e-22 dispersed
Hepe04g0870 Hepe-Chr4:62991912 Hepe07g0782 Hepe-Chr7:9508398 3.82e-258 dispersed
Hepe04g0870 Hepe-Chr4:62991912 Hepe04g0258 Hepe-Chr4:45783203 1.26e-11 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe04g0870 K26731 - csv:101207589 1320.06